Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC-0.25□□□□□ -2.45
VCANP13611 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC-0.25□□□□□ -2.45
VCANP13611 AC134026.1-201ENST00000623249 2239 ntBASIC-0.25□□□□□ -2.45
VCANP13611 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC-0.25□□□□□ -2.45
VCANP13611 PNRC2P1-201ENST00000423940 420 ntBASIC-0.25□□□□□ -2.45
VCANP13611 TPMTP4-201ENST00000450749 678 ntBASIC-0.25□□□□□ -2.45
VCANP13611 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC-0.25□□□□□ -2.45
VCANP13611 AC114811.1-201ENST00000507207 168 ntBASIC-0.25□□□□□ -2.45
VCANP13611 IGHVIII-38-1-201ENST00000521454 282 ntBASIC-0.25□□□□□ -2.45
VCANP13611 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC-0.25□□□□□ -2.45
VCANP13611 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC-0.25□□□□□ -2.45
VCANP13611 AL357312.1-201ENST00000603879 298 ntBASIC-0.25□□□□□ -2.45
VCANP13611 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC-0.25□□□□□ -2.45
VCANP13611 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC-0.25□□□□□ -2.45
VCANP13611 AC021146.9-201ENST00000512503 156 ntBASIC-0.25□□□□□ -2.45
VCANP13611 RNU6-320P-201ENST00000516511 106 ntBASIC-0.25□□□□□ -2.45
VCANP13611 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC-0.25□□□□□ -2.45
VCANP13611 AC097065.2-201ENST00000608159 533 ntBASIC-0.25□□□□□ -2.45
VCANP13611 AL133370.2-201ENST00000619934 439 ntBASIC-0.25□□□□□ -2.45
VCANP13611 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC-0.25□□□□□ -2.45
VCANP13611 AC243964.1-201ENST00000441814 261 ntBASIC-0.26□□□□□ -2.45
VCANP13611 RNA5SP461-201ENST00000516451 104 ntBASIC-0.26□□□□□ -2.45
VCANP13611 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC-0.26□□□□□ -2.45
VCANP13611 SNORD114-9-201ENST00000364370 72 ntBASIC-0.26□□□□□ -2.45
VCANP13611 Y_RNA.428-201ENST00000384078 102 ntBASIC-0.26□□□□□ -2.45
VCANP13611 SNORA29-201ENST00000384183 140 ntBASIC-0.26□□□□□ -2.45
VCANP13611 Y_RNA.475-201ENST00000384345 101 ntBASIC-0.26□□□□□ -2.45
VCANP13611 RN7SKP266-201ENST00000410232 287 ntBASIC-0.26□□□□□ -2.45
VCANP13611 AC069282.1-201ENST00000411911 526 ntBASIC-0.26□□□□□ -2.45
VCANP13611 ZFAND6P1-201ENST00000434138 605 ntBASIC-0.26□□□□□ -2.45
VCANP13611 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC-0.26□□□□□ -2.45
VCANP13611 AL138478.1-201ENST00000612252 832 ntBASIC-0.26□□□□□ -2.45
VCANP13611 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC-0.26□□□□□ -2.45
VCANP13611 AC008443.7-201ENST00000622195 246 ntBASIC-0.26□□□□□ -2.45
VCANP13611 AC099654.5-201ENST00000636479 350 ntBASIC-0.26□□□□□ -2.45
VCANP13611 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC-0.26□□□□□ -2.45
VCANP13611 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC-0.26□□□□□ -2.45
VCANP13611 AL354941.1-201ENST00000438600 464 ntBASIC-0.26□□□□□ -2.45
VCANP13611 SPINT5P-201ENST00000448174 155 ntBASIC-0.26□□□□□ -2.45
VCANP13611 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC-0.26□□□□□ -2.45
VCANP13611 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC-0.26□□□□□ -2.45
VCANP13611 RNU6ATAC25P-201ENST00000408798 117 ntBASIC-0.27□□□□□ -2.45
VCANP13611 VN1R84P-201ENST00000593697 235 ntBASIC-0.27□□□□□ -2.45
VCANP13611 Z98751.3-201ENST00000604447 521 ntBASIC-0.27□□□□□ -2.45
VCANP13611 AC113194.1-201ENST00000606037 500 ntBASIC-0.27□□□□□ -2.45
VCANP13611 RNU6-657P-201ENST00000383904 107 ntBASIC-0.27□□□□□ -2.45
VCANP13611 Y_RNA.403-201ENST00000383977 101 ntBASIC-0.27□□□□□ -2.45
VCANP13611 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC-0.27□□□□□ -2.45
VCANP13611 HMGN2P15-201ENST00000585707 270 ntBASIC-0.27□□□□□ -2.45
VCANP13611 PCNAP1-202ENST00000595299 752 ntBASIC-0.27□□□□□ -2.45
VCANP13611 AL450336.1-201ENST00000605180 586 ntBASIC-0.27□□□□□ -2.45
VCANP13611 AL596245.1-201ENST00000618994 362 ntBASIC-0.27□□□□□ -2.45
VCANP13611 RNU6-119P-201ENST00000364882 107 ntBASIC-0.28□□□□□ -2.45
VCANP13611 AL513475.1-201ENST00000406602 315 ntBASIC-0.28□□□□□ -2.45
VCANP13611 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC-0.28□□□□□ -2.45
VCANP13611 RNF2P1-201ENST00000442955 1010 ntBASIC-0.28□□□□□ -2.45
VCANP13611 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC-0.28□□□□□ -2.45
VCANP13611 Y_RNA.711-201ENST00000516993 102 ntBASIC-0.28□□□□□ -2.45
VCANP13611 RNU6-158P-201ENST00000517104 100 ntBASIC-0.28□□□□□ -2.45
VCANP13611 AP003066.2-201ENST00000529375 555 ntBASIC-0.28□□□□□ -2.45
VCANP13611 AC011260.1-201ENST00000578420 472 ntBASIC-0.28□□□□□ -2.45
VCANP13611 FCF1P6-201ENST00000456841 595 ntBASIC-0.28□□□□□ -2.45
VCANP13611 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC-0.28□□□□□ -2.45
VCANP13611 AC121334.2-201ENST00000605387 271 ntBASIC-0.28□□□□□ -2.45
VCANP13611 MIR548AZ-201ENST00000616567 95 ntBASIC-0.28□□□□□ -2.45
VCANP13611 SDAD1P2-201ENST00000441308 2028 ntBASIC-0.28□□□□□ -2.45
VCANP13611 AC092423.1-201ENST00000430165 186 ntBASIC-0.28□□□□□ -2.45
VCANP13611 RNA5SP227-201ENST00000516184 113 ntBASIC-0.28□□□□□ -2.45
VCANP13611 MIR3616-201ENST00000584070 92 ntBASIC-0.28□□□□□ -2.45
VCANP13611 RNA5SP108-201ENST00000605921 117 ntBASIC-0.28□□□□□ -2.45
VCANP13611 MIR6738-201ENST00000619620 64 ntBASIC-0.28□□□□□ -2.45
VCANP13611 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC-0.28□□□□□ -2.45
VCANP13611 RNU6-1197P-201ENST00000391183 107 ntBASIC-0.29□□□□□ -2.46
VCANP13611 DDX3P2-201ENST00000446138 111 ntBASIC-0.29□□□□□ -2.46
VCANP13611 AL049874.1-201ENST00000489560 388 ntBASIC-0.29□□□□□ -2.46
VCANP13611 AC093534.1-201ENST00000504977 132 ntBASIC-0.29□□□□□ -2.46
VCANP13611 AC105914.1-201ENST00000511798 226 ntBASIC-0.29□□□□□ -2.46
VCANP13611 RNA5SP468-201ENST00000516782 93 ntBASIC-0.29□□□□□ -2.46
VCANP13611 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC-0.29□□□□□ -2.46
VCANP13611 RNU6-110P-201ENST00000384508 104 ntBASIC-0.29□□□□□ -2.46
VCANP13611 MTND4P20-201ENST00000424125 869 ntBASIC-0.29□□□□□ -2.46
VCANP13611 MTCO2P32-201ENST00000514865 403 ntBASIC-0.29□□□□□ -2.46
VCANP13611 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.29□□□□□ -2.46
VCANP13611 AC009318.3-201ENST00000616916 503 ntBASIC-0.29□□□□□ -2.46
VCANP13611 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC-0.29□□□□□ -2.46
VCANP13611 MIR30A-201ENST00000385092 71 ntBASIC-0.29□□□□□ -2.46
VCANP13611 MIR196A2-201ENST00000385189 110 ntBASIC-0.29□□□□□ -2.46
VCANP13611 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC-0.29□□□□□ -2.46
VCANP13611 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC-0.29□□□□□ -2.46
VCANP13611 AL049545.1-201ENST00000401856 572 ntBASIC-0.3□□□□□ -2.46
VCANP13611 Y_RNA.616-201ENST00000410835 95 ntBASIC-0.3□□□□□ -2.46
VCANP13611 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC-0.3□□□□□ -2.46
VCANP13611 AL353691.1-201ENST00000451332 387 ntBASIC-0.3□□□□□ -2.46
VCANP13611 AC114981.1-201ENST00000503897 678 ntBASIC-0.3□□□□□ -2.46
VCANP13611 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC-0.3□□□□□ -2.46
VCANP13611 ZNF92P3-201ENST00000596594 954 ntBASIC-0.3□□□□□ -2.46
VCANP13611 FTX_2.1-201ENST00000618816 94 ntBASIC-0.3□□□□□ -2.46
VCANP13611 MIR4315-1-201ENST00000636800 73 ntBASIC-0.3□□□□□ -2.46
VCANP13611 MIR4315-2-201ENST00000640925 73 ntBASIC-0.3□□□□□ -2.46
VCANP13611 RNU6-1097P-201ENST00000363586 107 ntBASIC-0.3□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms