Protein–RNA interactions for Protein: P03905

MT-ND4, NADH-ubiquinone oxidoreductase chain 4, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND4P03905 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.64□□□□□ -2.15
MT-ND4P03905 AC096638.1-201ENST00000444678 216 ntBASIC1.64□□□□□ -2.15
MT-ND4P03905 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC1.64□□□□□ -2.15
MT-ND4P03905 MTAPP1-201ENST00000489154 819 ntBASIC1.64□□□□□ -2.15
MT-ND4P03905 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC1.64□□□□□ -2.15
MT-ND4P03905 RNU5B-3P-201ENST00000516601 115 ntBASIC1.64□□□□□ -2.15
MT-ND4P03905 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC1.64□□□□□ -2.15
MT-ND4P03905 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.64□□□□□ -2.15
MT-ND4P03905 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC1.64□□□□□ -2.15
MT-ND4P03905 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC1.64□□□□□ -2.15
MT-ND4P03905 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC1.64□□□□□ -2.15
MT-ND4P03905 AC012435.1-202ENST00000568772 240 ntBASIC1.64□□□□□ -2.15
MT-ND4P03905 AC024614.2-201ENST00000577584 372 ntBASIC1.64□□□□□ -2.15
MT-ND4P03905 AC090897.2-201ENST00000581715 130 ntBASIC1.64□□□□□ -2.15
MT-ND4P03905 AF131215.7-201ENST00000602443 707 ntBASIC1.64□□□□□ -2.15
MT-ND4P03905 AC005034.5-201ENST00000604219 466 ntBASIC1.64□□□□□ -2.15
MT-ND4P03905 AP002360.4-201ENST00000606980 481 ntBASIC1.64□□□□□ -2.15
MT-ND4P03905 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC1.64□□□□□ -2.15
MT-ND4P03905 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC1.64□□□□□ -2.15
MT-ND4P03905 AL590808.1-201ENST00000618696 141 ntBASIC1.64□□□□□ -2.15
MT-ND4P03905 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
MT-ND4P03905 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
MT-ND4P03905 RNU6-395P-201ENST00000365662 106 ntBASIC1.63□□□□□ -2.15
MT-ND4P03905 MIR634-201ENST00000385208 97 ntBASIC1.63□□□□□ -2.15
MT-ND4P03905 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
MT-ND4P03905 EDDM3CP-201ENST00000415977 425 ntBASIC1.63□□□□□ -2.15
MT-ND4P03905 RPL31P63-201ENST00000422565 375 ntBASIC1.63□□□□□ -2.15
MT-ND4P03905 AC007283.2-201ENST00000424739 197 ntBASIC1.63□□□□□ -2.15
MT-ND4P03905 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC1.63□□□□□ -2.15
MT-ND4P03905 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.63□□□□□ -2.15
MT-ND4P03905 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC1.63□□□□□ -2.15
MT-ND4P03905 MTCYBP39-201ENST00000437562 491 ntBASIC1.63□□□□□ -2.15
MT-ND4P03905 AL512286.1-201ENST00000439244 400 ntBASIC1.63□□□□□ -2.15
MT-ND4P03905 FABP5P13-201ENST00000452144 328 ntBASIC1.63□□□□□ -2.15
MT-ND4P03905 AL583843.1-201ENST00000456070 346 ntBASIC1.63□□□□□ -2.15
MT-ND4P03905 RNU7-51P-201ENST00000516560 62 ntBASIC1.63□□□□□ -2.15
MT-ND4P03905 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1.63□□□□□ -2.15
MT-ND4P03905 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
MT-ND4P03905 POC1B-211ENST00000549504 581 ntTSL 5 BASIC1.63□□□□□ -2.15
MT-ND4P03905 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC1.63□□□□□ -2.15
MT-ND4P03905 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
MT-ND4P03905 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC1.63□□□□□ -2.15
MT-ND4P03905 AL355297.2-201ENST00000604792 129 ntBASIC1.63□□□□□ -2.15
MT-ND4P03905 AL031775.1-201ENST00000607014 887 ntBASIC1.63□□□□□ -2.15
MT-ND4P03905 MIR5739-201ENST00000619803 80 ntBASIC1.63□□□□□ -2.15
MT-ND4P03905 YWHAEP7-203ENST00000622054 312 ntBASIC1.63□□□□□ -2.15
MT-ND4P03905 AC024940.5-201ENST00000622889 474 ntBASIC1.63□□□□□ -2.15
MT-ND4P03905 AC006927.3-201ENST00000638789 384 ntBASIC1.63□□□□□ -2.15
MT-ND4P03905 ATM-228ENST00000639240 498 ntTSL 5 BASIC1.63□□□□□ -2.15
MT-ND4P03905 ATM-230ENST00000640388 578 ntTSL 5 BASIC1.63□□□□□ -2.15
MT-ND4P03905 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
MT-ND4P03905 SNORD3E-201ENST00000362899 217 ntBASIC1.62□□□□□ -2.15
MT-ND4P03905 SNORD56.2-201ENST00000363242 71 ntBASIC1.62□□□□□ -2.15
MT-ND4P03905 SNORA16.1-201ENST00000364597 132 ntBASIC1.62□□□□□ -2.15
MT-ND4P03905 SNORA3.2-201ENST00000408221 125 ntBASIC1.62□□□□□ -2.15
MT-ND4P03905 MIR1302-8-201ENST00000408342 128 ntBASIC1.62□□□□□ -2.15
MT-ND4P03905 RNU2-2P-201ENST00000410396 191 ntBASIC1.62□□□□□ -2.15
MT-ND4P03905 RN7SKP223-201ENST00000410582 62 ntBASIC1.62□□□□□ -2.15
MT-ND4P03905 Y_RNA.608-201ENST00000410647 95 ntBASIC1.62□□□□□ -2.15
MT-ND4P03905 AC011233.1-201ENST00000422812 283 ntBASIC1.62□□□□□ -2.15
MT-ND4P03905 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.62□□□□□ -2.15
MT-ND4P03905 AL593851.1-201ENST00000426171 157 ntBASIC1.62□□□□□ -2.15
MT-ND4P03905 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC1.62□□□□□ -2.15
MT-ND4P03905 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC1.62□□□□□ -2.15
MT-ND4P03905 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.62□□□□□ -2.15
MT-ND4P03905 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.62□□□□□ -2.15
MT-ND4P03905 AL136380.1-201ENST00000447970 162 ntBASIC1.62□□□□□ -2.15
MT-ND4P03905 AL353705.4-201ENST00000449661 238 ntBASIC1.62□□□□□ -2.15
MT-ND4P03905 AC003071.1-201ENST00000451219 789 ntBASIC1.62□□□□□ -2.15
MT-ND4P03905 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC1.62□□□□□ -2.15
MT-ND4P03905 AC010587.1-201ENST00000505809 469 ntBASIC1.62□□□□□ -2.15
MT-ND4P03905 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC1.62□□□□□ -2.15
MT-ND4P03905 RNU6-415P-201ENST00000516252 97 ntBASIC1.62□□□□□ -2.15
MT-ND4P03905 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC1.62□□□□□ -2.15
MT-ND4P03905 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.62□□□□□ -2.15
MT-ND4P03905 AP001372.4-201ENST00000524889 472 ntBASIC1.62□□□□□ -2.15
MT-ND4P03905 AC092325.1-201ENST00000566449 554 ntBASIC1.62□□□□□ -2.15
MT-ND4P03905 AL713866.2-201ENST00000603579 219 ntBASIC1.62□□□□□ -2.15
MT-ND4P03905 AL022154.1-201ENST00000604698 785 ntBASIC1.62□□□□□ -2.15
MT-ND4P03905 AC126118.1-201ENST00000607744 628 ntBASIC1.62□□□□□ -2.15
MT-ND4P03905 U2.15-201ENST00000611544 191 ntBASIC1.62□□□□□ -2.15
MT-ND4P03905 U2.16-201ENST00000613119 191 ntBASIC1.62□□□□□ -2.15
MT-ND4P03905 AC022202.1-201ENST00000613515 211 ntBASIC1.62□□□□□ -2.15
MT-ND4P03905 U2.12-201ENST00000613778 191 ntBASIC1.62□□□□□ -2.15
MT-ND4P03905 U2.20-201ENST00000613956 192 ntBASIC1.62□□□□□ -2.15
MT-ND4P03905 U2.9-201ENST00000615427 191 ntBASIC1.62□□□□□ -2.15
MT-ND4P03905 AC027807.2-201ENST00000616099 408 ntBASIC1.62□□□□□ -2.15
MT-ND4P03905 U2.11-201ENST00000616345 191 ntBASIC1.62□□□□□ -2.15
MT-ND4P03905 U2.2-201ENST00000616535 191 ntBASIC1.62□□□□□ -2.15
MT-ND4P03905 U2.3-201ENST00000617785 191 ntBASIC1.62□□□□□ -2.15
MT-ND4P03905 AC092140.2-201ENST00000618027 521 ntBASIC1.62□□□□□ -2.15
MT-ND4P03905 U2.19-201ENST00000618602 191 ntBASIC1.62□□□□□ -2.15
MT-ND4P03905 RNU2-1-201ENST00000618664 191 ntBASIC1.62□□□□□ -2.15
MT-ND4P03905 U2.6-201ENST00000619225 191 ntBASIC1.62□□□□□ -2.15
MT-ND4P03905 U2.5-201ENST00000619465 191 ntBASIC1.62□□□□□ -2.15
MT-ND4P03905 U2.10-201ENST00000620268 191 ntBASIC1.62□□□□□ -2.15
MT-ND4P03905 MIR6852-201ENST00000621699 66 ntBASIC1.62□□□□□ -2.15
MT-ND4P03905 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.62□□□□□ -2.15
MT-ND4P03905 AC068787.1-201ENST00000623908 691 ntBASIC1.62□□□□□ -2.15
MT-ND4P03905 AC064859.1-201ENST00000624741 174 ntBASIC1.62□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms