Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 AF250324.2-201ENST00000608299 610 ntBASIC2.7□□□□□ -1.98
O00370 AP001596.2-201ENST00000608410 312 ntBASIC2.7□□□□□ -1.98
O00370 AC013562.2-201ENST00000611632 603 ntBASIC2.7□□□□□ -1.98
O00370 AC087241.4-201ENST00000612441 480 ntBASIC2.7□□□□□ -1.98
O00370 AC073534.2-201ENST00000620377 381 ntBASIC2.7□□□□□ -1.98
O00370 AC011155.2-201ENST00000623202 216 ntBASIC2.7□□□□□ -1.98
O00370 AC124864.2-201ENST00000624736 186 ntBASIC2.7□□□□□ -1.98
O00370 AC027514.1-201ENST00000588561 1603 ntBASIC2.7□□□□□ -1.98
O00370 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.7□□□□□ -1.98
O00370 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.7□□□□□ -1.98
O00370 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC2.69□□□□□ -1.98
O00370 AC103710.2-202ENST00000641454 2853 ntBASIC2.69□□□□□ -1.98
O00370 MTND5P17-201ENST00000418405 1603 ntBASIC2.69□□□□□ -1.98
O00370 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.69□□□□□ -1.98
O00370 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
O00370 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.69□□□□□ -1.98
O00370 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC2.69□□□□□ -1.98
O00370 Y_RNA.516-201ENST00000384541 124 ntBASIC2.69□□□□□ -1.98
O00370 Y_RNA.534-201ENST00000384599 112 ntBASIC2.69□□□□□ -1.98
O00370 MIR196B-201ENST00000384852 84 ntBASIC2.69□□□□□ -1.98
O00370 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.69□□□□□ -1.98
O00370 OR51A5P-201ENST00000415429 942 ntBASIC2.69□□□□□ -1.98
O00370 MTCYBP8-201ENST00000422855 651 ntBASIC2.69□□□□□ -1.98
O00370 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC2.69□□□□□ -1.98
O00370 C8orf59P1-201ENST00000429930 303 ntBASIC2.69□□□□□ -1.98
O00370 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.69□□□□□ -1.98
O00370 AC104058.1-201ENST00000448028 297 ntBASIC2.69□□□□□ -1.98
O00370 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
O00370 RNU4-29P-201ENST00000515943 174 ntBASIC2.69□□□□□ -1.98
O00370 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.69□□□□□ -1.98
O00370 SCARNA17.1-201ENST00000516211 143 ntBASIC2.69□□□□□ -1.98
O00370 SCARNA17.2-201ENST00000516334 143 ntBASIC2.69□□□□□ -1.98
O00370 Y_RNA.704-201ENST00000516851 102 ntBASIC2.69□□□□□ -1.98
O00370 AC025755.1-201ENST00000521306 278 ntBASIC2.69□□□□□ -1.98
O00370 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC2.69□□□□□ -1.98
O00370 AP003122.3-201ENST00000526316 255 ntBASIC2.69□□□□□ -1.98
O00370 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC2.69□□□□□ -1.98
O00370 AP003072.2-201ENST00000527756 676 ntBASIC2.69□□□□□ -1.98
O00370 AC084851.1-201ENST00000529105 249 ntBASIC2.69□□□□□ -1.98
O00370 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.69□□□□□ -1.98
O00370 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.69□□□□□ -1.98
O00370 MTATP6P3-201ENST00000581686 676 ntBASIC2.69□□□□□ -1.98
O00370 MIR3162-201ENST00000581818 82 ntBASIC2.69□□□□□ -1.98
O00370 MIR5092-201ENST00000583139 88 ntBASIC2.69□□□□□ -1.98
O00370 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2.69□□□□□ -1.98
O00370 AC146944.4-201ENST00000602697 718 ntBASIC2.69□□□□□ -1.98
O00370 AC174048.1-201ENST00000603389 144 ntBASIC2.69□□□□□ -1.98
O00370 AL138889.2-201ENST00000603883 242 ntBASIC2.69□□□□□ -1.98
O00370 AC084782.3-201ENST00000612282 578 ntBASIC2.69□□□□□ -1.98
O00370 DUSP12P1-201ENST00000612874 516 ntBASIC2.69□□□□□ -1.98
O00370 SCARNA17.4-201ENST00000614296 143 ntBASIC2.69□□□□□ -1.98
O00370 AL354950.2-201ENST00000617939 290 ntBASIC2.69□□□□□ -1.98
O00370 AC068792.1-201ENST00000621354 417 ntBASIC2.69□□□□□ -1.98
O00370 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.69□□□□□ -1.98
O00370 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC2.69□□□□□ -1.98
O00370 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.69□□□□□ -1.98
O00370 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.69□□□□□ -1.98
O00370 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.69□□□□□ -1.98
O00370 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.69□□□□□ -1.98
O00370 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
O00370 Y_RNA.33-201ENST00000362591 102 ntBASIC2.68□□□□□ -1.98
O00370 RNU6-1103P-201ENST00000384150 107 ntBASIC2.68□□□□□ -1.98
O00370 MIR27B-201ENST00000385129 97 ntBASIC2.68□□□□□ -1.98
O00370 RNU6-550P-201ENST00000391057 101 ntBASIC2.68□□□□□ -1.98
O00370 CALM2P3-201ENST00000400429 449 ntBASIC2.68□□□□□ -1.98
O00370 MIR888-201ENST00000401186 77 ntBASIC2.68□□□□□ -1.98
O00370 OR6C66P-201ENST00000414917 930 ntBASIC2.68□□□□□ -1.98
O00370 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC2.68□□□□□ -1.98
O00370 AC000111.3-201ENST00000433478 193 ntBASIC2.68□□□□□ -1.98
O00370 AL606489.2-201ENST00000433886 234 ntBASIC2.68□□□□□ -1.98
O00370 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.68□□□□□ -1.98
O00370 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.68□□□□□ -1.98
O00370 AC104389.3-201ENST00000445629 235 ntBASIC2.68□□□□□ -1.98
O00370 AC090096.1-201ENST00000489168 390 ntBASIC2.68□□□□□ -1.98
O00370 AC092436.1-201ENST00000506450 503 ntBASIC2.68□□□□□ -1.98
O00370 AC098591.2-201ENST00000510152 315 ntBASIC2.68□□□□□ -1.98
O00370 AC008716.1-201ENST00000511084 513 ntBASIC2.68□□□□□ -1.98
O00370 RNA5SP320-201ENST00000516263 124 ntBASIC2.68□□□□□ -1.98
O00370 RNU6-572P-201ENST00000516724 80 ntBASIC2.68□□□□□ -1.98
O00370 SNORA31.19-201ENST00000517079 126 ntBASIC2.68□□□□□ -1.98
O00370 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC2.68□□□□□ -1.98
O00370 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC2.68□□□□□ -1.98
O00370 MIR4703-201ENST00000577728 79 ntBASIC2.68□□□□□ -1.98
O00370 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC2.68□□□□□ -1.98
O00370 MIR4775-201ENST00000581168 75 ntBASIC2.68□□□□□ -1.98
O00370 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC2.68□□□□□ -1.98
O00370 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.68□□□□□ -1.98
O00370 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC2.68□□□□□ -1.98
O00370 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.68□□□□□ -1.98
O00370 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
O00370 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.67□□□□□ -1.98
O00370 AL359693.1-201ENST00000614959 2407 ntBASIC2.67□□□□□ -1.98
O00370 MIR449A-201ENST00000362113 91 ntBASIC2.67□□□□□ -1.98
O00370 RNU6-1085P-201ENST00000363576 107 ntBASIC2.67□□□□□ -1.98
O00370 RNA5SP68-201ENST00000363885 119 ntBASIC2.67□□□□□ -1.98
O00370 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.67□□□□□ -1.98
O00370 RNU1-73P-201ENST00000383971 164 ntBASIC2.67□□□□□ -1.98
O00370 RNU6-1179P-201ENST00000384667 107 ntBASIC2.67□□□□□ -1.98
O00370 MIR518C-201ENST00000384822 101 ntBASIC2.67□□□□□ -1.98
O00370 RPS4XP8-201ENST00000402039 771 ntBASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms