Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 Y_RNA.1-201ENST00000352915 104 ntBASIC2.12□□□□□ -2.07
TRIM49D1C9J1S8 RNA5SP289-201ENST00000362332 137 ntBASIC2.12□□□□□ -2.07
TRIM49D1C9J1S8 RNU6-1167P-201ENST00000363227 94 ntBASIC2.12□□□□□ -2.07
TRIM49D1C9J1S8 RNA5SP126-201ENST00000365092 109 ntBASIC2.12□□□□□ -2.07
TRIM49D1C9J1S8 SNORA4.3-201ENST00000365564 137 ntBASIC2.12□□□□□ -2.07
TRIM49D1C9J1S8 RNU6-301P-201ENST00000384277 107 ntBASIC2.12□□□□□ -2.07
TRIM49D1C9J1S8 Y_RNA.576-201ENST00000384781 102 ntBASIC2.12□□□□□ -2.07
TRIM49D1C9J1S8 RNU6-1158P-201ENST00000391167 107 ntBASIC2.12□□□□□ -2.07
TRIM49D1C9J1S8 CISD1P1-201ENST00000393907 327 ntBASIC2.12□□□□□ -2.07
TRIM49D1C9J1S8 RNU2-33P-201ENST00000410344 192 ntBASIC2.12□□□□□ -2.07
TRIM49D1C9J1S8 Y_RNA.619-201ENST00000410951 90 ntBASIC2.12□□□□□ -2.07
TRIM49D1C9J1S8 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC2.12□□□□□ -2.07
TRIM49D1C9J1S8 PIGFP2-201ENST00000421400 651 ntBASIC2.12□□□□□ -2.07
TRIM49D1C9J1S8 MTCO3P30-201ENST00000426425 670 ntBASIC2.12□□□□□ -2.07
TRIM49D1C9J1S8 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC2.12□□□□□ -2.07
TRIM49D1C9J1S8 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC2.12□□□□□ -2.07
TRIM49D1C9J1S8 GPR143P-201ENST00000434155 205 ntBASIC2.12□□□□□ -2.07
TRIM49D1C9J1S8 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC2.12□□□□□ -2.07
TRIM49D1C9J1S8 AL121871.1-201ENST00000443413 436 ntBASIC2.12□□□□□ -2.07
TRIM49D1C9J1S8 AC009237.8-201ENST00000445492 379 ntBASIC2.12□□□□□ -2.07
TRIM49D1C9J1S8 FABP5P13-201ENST00000452144 328 ntBASIC2.12□□□□□ -2.07
TRIM49D1C9J1S8 MTCO2P29-201ENST00000465212 189 ntBASIC2.12□□□□□ -2.07
TRIM49D1C9J1S8 AC079804.2-201ENST00000490376 200 ntBASIC2.12□□□□□ -2.07
TRIM49D1C9J1S8 RPL23AP49-201ENST00000492925 468 ntBASIC2.12□□□□□ -2.07
TRIM49D1C9J1S8 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC2.12□□□□□ -2.07
TRIM49D1C9J1S8 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC2.12□□□□□ -2.07
TRIM49D1C9J1S8 SCARNA16.3-201ENST00000516595 184 ntBASIC2.12□□□□□ -2.07
TRIM49D1C9J1S8 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC2.12□□□□□ -2.07
TRIM49D1C9J1S8 OR5AL2P-201ENST00000532185 920 ntBASIC2.12□□□□□ -2.07
TRIM49D1C9J1S8 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC2.12□□□□□ -2.07
TRIM49D1C9J1S8 TPRKBP2-201ENST00000565969 475 ntBASIC2.12□□□□□ -2.07
TRIM49D1C9J1S8 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC2.12□□□□□ -2.07
TRIM49D1C9J1S8 EIF1P4-201ENST00000572664 335 ntBASIC2.12□□□□□ -2.07
TRIM49D1C9J1S8 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.12□□□□□ -2.07
TRIM49D1C9J1S8 MTATP6P3-201ENST00000581686 676 ntBASIC2.12□□□□□ -2.07
TRIM49D1C9J1S8 AC002984.1-201ENST00000591692 448 ntBASIC2.12□□□□□ -2.07
TRIM49D1C9J1S8 AL158032.1-201ENST00000605401 106 ntBASIC2.12□□□□□ -2.07
TRIM49D1C9J1S8 AC022893.3-201ENST00000607665 437 ntBASIC2.12□□□□□ -2.07
TRIM49D1C9J1S8 AC126118.1-201ENST00000607744 628 ntBASIC2.12□□□□□ -2.07
TRIM49D1C9J1S8 AC109347.2-201ENST00000610220 349 ntBASIC2.12□□□□□ -2.07
TRIM49D1C9J1S8 AC087241.4-201ENST00000612441 480 ntBASIC2.12□□□□□ -2.07
TRIM49D1C9J1S8 DUSP12P1-201ENST00000612874 516 ntBASIC2.12□□□□□ -2.07
TRIM49D1C9J1S8 AC025034.2-201ENST00000623264 286 ntBASIC2.12□□□□□ -2.07
TRIM49D1C9J1S8 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.12□□□□□ -2.07
TRIM49D1C9J1S8 Z99571.1-201ENST00000636677 394 ntBASIC2.12□□□□□ -2.07
TRIM49D1C9J1S8 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
TRIM49D1C9J1S8 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
TRIM49D1C9J1S8 RNU6-461P-201ENST00000364195 107 ntBASIC2.11□□□□□ -2.07
TRIM49D1C9J1S8 SNORA67.1-201ENST00000364749 141 ntBASIC2.11□□□□□ -2.07
TRIM49D1C9J1S8 Y_RNA.505-201ENST00000384489 102 ntBASIC2.11□□□□□ -2.07
TRIM49D1C9J1S8 RNA5SP354-201ENST00000391247 136 ntBASIC2.11□□□□□ -2.07
TRIM49D1C9J1S8 RNU2-39P-201ENST00000410604 198 ntBASIC2.11□□□□□ -2.07
TRIM49D1C9J1S8 RNU2-62P-201ENST00000410868 191 ntBASIC2.11□□□□□ -2.07
TRIM49D1C9J1S8 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.11□□□□□ -2.07
TRIM49D1C9J1S8 AL139413.1-201ENST00000421309 217 ntBASIC2.11□□□□□ -2.07
TRIM49D1C9J1S8 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC2.11□□□□□ -2.07
TRIM49D1C9J1S8 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC2.11□□□□□ -2.07
TRIM49D1C9J1S8 AC002486.1-201ENST00000435098 391 ntBASIC2.11□□□□□ -2.07
TRIM49D1C9J1S8 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC2.11□□□□□ -2.07
TRIM49D1C9J1S8 EEF1B2P7-201ENST00000451177 676 ntBASIC2.11□□□□□ -2.07
TRIM49D1C9J1S8 RPL31P41-201ENST00000477967 372 ntBASIC2.11□□□□□ -2.07
TRIM49D1C9J1S8 RPS15AP34-201ENST00000487776 387 ntBASIC2.11□□□□□ -2.07
TRIM49D1C9J1S8 RPL30P5-201ENST00000494923 336 ntBASIC2.11□□□□□ -2.07
TRIM49D1C9J1S8 HMGB3P3-201ENST00000510526 400 ntBASIC2.11□□□□□ -2.07
TRIM49D1C9J1S8 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC2.11□□□□□ -2.07
TRIM49D1C9J1S8 RNU6-718P-201ENST00000516166 105 ntBASIC2.11□□□□□ -2.07
TRIM49D1C9J1S8 SNORD27.1-201ENST00000516319 72 ntBASIC2.11□□□□□ -2.07
TRIM49D1C9J1S8 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC2.11□□□□□ -2.07
TRIM49D1C9J1S8 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC2.11□□□□□ -2.07
TRIM49D1C9J1S8 AC027807.1-201ENST00000559921 996 ntBASIC2.11□□□□□ -2.07
TRIM49D1C9J1S8 MIR3921-201ENST00000577308 85 ntBASIC2.11□□□□□ -2.07
TRIM49D1C9J1S8 MIR3682-201ENST00000581338 84 ntBASIC2.11□□□□□ -2.07
TRIM49D1C9J1S8 NRBF2P1-201ENST00000587407 859 ntBASIC2.11□□□□□ -2.07
TRIM49D1C9J1S8 AC008521.1-201ENST00000587471 187 ntBASIC2.11□□□□□ -2.07
TRIM49D1C9J1S8 MIR15A-201ENST00000607334 83 ntBASIC2.11□□□□□ -2.07
TRIM49D1C9J1S8 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2.11□□□□□ -2.07
TRIM49D1C9J1S8 AC072046.2-201ENST00000618366 268 ntBASIC2.11□□□□□ -2.07
TRIM49D1C9J1S8 AC005858.4-201ENST00000623191 700 ntBASIC2.11□□□□□ -2.07
TRIM49D1C9J1S8 AC011155.2-201ENST00000623202 216 ntBASIC2.11□□□□□ -2.07
TRIM49D1C9J1S8 MTND5P42-201ENST00000637720 498 ntBASIC2.11□□□□□ -2.07
TRIM49D1C9J1S8 MTND4P1-201ENST00000457501 1466 ntBASIC2.11□□□□□ -2.07
TRIM49D1C9J1S8 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.11□□□□□ -2.07
TRIM49D1C9J1S8 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.1□□□□□ -2.07
TRIM49D1C9J1S8 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
TRIM49D1C9J1S8 RNU6-223P-201ENST00000362830 107 ntBASIC2.1□□□□□ -2.07
TRIM49D1C9J1S8 RNU6-1303P-201ENST00000364841 107 ntBASIC2.1□□□□□ -2.07
TRIM49D1C9J1S8 RNU6-1029P-201ENST00000384109 107 ntBASIC2.1□□□□□ -2.07
TRIM49D1C9J1S8 RNU6-517P-201ENST00000384362 110 ntBASIC2.1□□□□□ -2.07
TRIM49D1C9J1S8 Y_RNA.534-201ENST00000384599 112 ntBASIC2.1□□□□□ -2.07
TRIM49D1C9J1S8 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
TRIM49D1C9J1S8 AL445529.1-201ENST00000398713 389 ntBASIC2.1□□□□□ -2.07
TRIM49D1C9J1S8 AC007064.1-201ENST00000412238 351 ntBASIC2.1□□□□□ -2.07
TRIM49D1C9J1S8 RPS12P24-201ENST00000412619 387 ntBASIC2.1□□□□□ -2.07
TRIM49D1C9J1S8 EEF1A1P40-201ENST00000412883 573 ntBASIC2.1□□□□□ -2.07
TRIM49D1C9J1S8 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC2.1□□□□□ -2.07
TRIM49D1C9J1S8 MTATP6P18-201ENST00000417994 673 ntBASIC2.1□□□□□ -2.07
TRIM49D1C9J1S8 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC2.1□□□□□ -2.07
TRIM49D1C9J1S8 SKA2P1-201ENST00000425592 390 ntBASIC2.1□□□□□ -2.07
TRIM49D1C9J1S8 AC009414.1-201ENST00000427200 443 ntBASIC2.1□□□□□ -2.07
TRIM49D1C9J1S8 MED13P1-201ENST00000428342 171 ntBASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 114 ms