Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 AL031183.1-201ENST00000457667 207 ntBASIC2.72□□□□□ -1.97
IGHV4-28A0A0C4DH34 U8.18-201ENST00000459285 133 ntBASIC2.72□□□□□ -1.97
IGHV4-28A0A0C4DH34 AC133134.1-201ENST00000466800 359 ntBASIC2.72□□□□□ -1.97
IGHV4-28A0A0C4DH34 MRPL42P6-201ENST00000486397 371 ntBASIC2.72□□□□□ -1.97
IGHV4-28A0A0C4DH34 AC116655.1-201ENST00000508324 901 ntBASIC2.72□□□□□ -1.97
IGHV4-28A0A0C4DH34 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC2.72□□□□□ -1.97
IGHV4-28A0A0C4DH34 VWA8P1-201ENST00000510889 176 ntBASIC2.72□□□□□ -1.97
IGHV4-28A0A0C4DH34 RAC1P2-201ENST00000511164 579 ntBASIC2.72□□□□□ -1.97
IGHV4-28A0A0C4DH34 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.72□□□□□ -1.97
IGHV4-28A0A0C4DH34 RNA5SP208-201ENST00000516156 78 ntBASIC2.72□□□□□ -1.97
IGHV4-28A0A0C4DH34 RNU6-612P-201ENST00000516909 102 ntBASIC2.72□□□□□ -1.97
IGHV4-28A0A0C4DH34 AP005902.1-201ENST00000521358 186 ntBASIC2.72□□□□□ -1.97
IGHV4-28A0A0C4DH34 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC2.72□□□□□ -1.97
IGHV4-28A0A0C4DH34 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC2.72□□□□□ -1.97
IGHV4-28A0A0C4DH34 AC010186.2-204ENST00000537668 439 ntBASIC2.72□□□□□ -1.97
IGHV4-28A0A0C4DH34 AC006199.1-201ENST00000548728 219 ntBASIC2.72□□□□□ -1.97
IGHV4-28A0A0C4DH34 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.72□□□□□ -1.97
IGHV4-28A0A0C4DH34 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC2.72□□□□□ -1.97
IGHV4-28A0A0C4DH34 AC022432.1-201ENST00000595739 310 ntBASIC2.72□□□□□ -1.97
IGHV4-28A0A0C4DH34 AC018889.1-201ENST00000605372 397 ntBASIC2.72□□□□□ -1.97
IGHV4-28A0A0C4DH34 AC005046.1-201ENST00000608515 625 ntBASIC2.72□□□□□ -1.97
IGHV4-28A0A0C4DH34 Y_RNA.812-201ENST00000610788 101 ntBASIC2.72□□□□□ -1.97
IGHV4-28A0A0C4DH34 Y_RNA.784-201ENST00000613803 101 ntBASIC2.72□□□□□ -1.97
IGHV4-28A0A0C4DH34 Y_RNA.787-201ENST00000616522 101 ntBASIC2.72□□□□□ -1.97
IGHV4-28A0A0C4DH34 Y_RNA.780-201ENST00000617336 101 ntBASIC2.72□□□□□ -1.97
IGHV4-28A0A0C4DH34 Y_RNA.801-201ENST00000619005 101 ntBASIC2.72□□□□□ -1.97
IGHV4-28A0A0C4DH34 uc_338.22-201ENST00000622722 187 ntBASIC2.72□□□□□ -1.97
IGHV4-28A0A0C4DH34 MIR3199-2-201ENST00000636243 86 ntBASIC2.72□□□□□ -1.97
IGHV4-28A0A0C4DH34 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
IGHV4-28A0A0C4DH34 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC2.72□□□□□ -1.97
IGHV4-28A0A0C4DH34 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC2.72□□□□□ -1.97
IGHV4-28A0A0C4DH34 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
IGHV4-28A0A0C4DH34 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
IGHV4-28A0A0C4DH34 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC2.72□□□□□ -1.97
IGHV4-28A0A0C4DH34 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
IGHV4-28A0A0C4DH34 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.71□□□□□ -1.98
IGHV4-28A0A0C4DH34 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
IGHV4-28A0A0C4DH34 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC2.71□□□□□ -1.98
IGHV4-28A0A0C4DH34 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.71□□□□□ -1.98
IGHV4-28A0A0C4DH34 Y_RNA.31-201ENST00000362574 102 ntBASIC2.71□□□□□ -1.98
IGHV4-28A0A0C4DH34 Y_RNA.48-201ENST00000362710 103 ntBASIC2.71□□□□□ -1.98
IGHV4-28A0A0C4DH34 U8.8-201ENST00000365399 135 ntBASIC2.71□□□□□ -1.98
IGHV4-28A0A0C4DH34 Y_RNA.395-201ENST00000383945 109 ntBASIC2.71□□□□□ -1.98
IGHV4-28A0A0C4DH34 RPS29P13-201ENST00000402041 169 ntBASIC2.71□□□□□ -1.98
IGHV4-28A0A0C4DH34 RNU6-174P-201ENST00000410406 106 ntBASIC2.71□□□□□ -1.98
IGHV4-28A0A0C4DH34 AC023141.4-201ENST00000412031 328 ntBASIC2.71□□□□□ -1.98
IGHV4-28A0A0C4DH34 BX276092.3-201ENST00000424182 230 ntBASIC2.71□□□□□ -1.98
IGHV4-28A0A0C4DH34 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.71□□□□□ -1.98
IGHV4-28A0A0C4DH34 GOT2P5-201ENST00000433995 546 ntBASIC2.71□□□□□ -1.98
IGHV4-28A0A0C4DH34 RPS15AP5-201ENST00000436276 388 ntBASIC2.71□□□□□ -1.98
IGHV4-28A0A0C4DH34 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.71□□□□□ -1.98
IGHV4-28A0A0C4DH34 RPL21P23-201ENST00000446654 460 ntBASIC2.71□□□□□ -1.98
IGHV4-28A0A0C4DH34 RPL23AP62-201ENST00000463396 453 ntBASIC2.71□□□□□ -1.98
IGHV4-28A0A0C4DH34 FO393415.2-201ENST00000480085 343 ntBASIC2.71□□□□□ -1.98
IGHV4-28A0A0C4DH34 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.71□□□□□ -1.98
IGHV4-28A0A0C4DH34 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC2.71□□□□□ -1.98
IGHV4-28A0A0C4DH34 AC022493.2-201ENST00000506122 481 ntBASIC2.71□□□□□ -1.98
IGHV4-28A0A0C4DH34 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC2.71□□□□□ -1.98
IGHV4-28A0A0C4DH34 AC010265.1-201ENST00000513509 211 ntBASIC2.71□□□□□ -1.98
IGHV4-28A0A0C4DH34 SNORA31.1-201ENST00000515993 133 ntBASIC2.71□□□□□ -1.98
IGHV4-28A0A0C4DH34 SNORA31.5-201ENST00000516190 133 ntBASIC2.71□□□□□ -1.98
IGHV4-28A0A0C4DH34 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC2.71□□□□□ -1.98
IGHV4-28A0A0C4DH34 ELOCP31-201ENST00000540463 467 ntBASIC2.71□□□□□ -1.98
IGHV4-28A0A0C4DH34 SNRPGP18-201ENST00000553000 214 ntBASIC2.71□□□□□ -1.98
IGHV4-28A0A0C4DH34 AC090877.1-201ENST00000561418 344 ntBASIC2.71□□□□□ -1.98
IGHV4-28A0A0C4DH34 MTCO3P13-201ENST00000577757 781 ntBASIC2.71□□□□□ -1.98
IGHV4-28A0A0C4DH34 MIR4429-201ENST00000580105 73 ntBASIC2.71□□□□□ -1.98
IGHV4-28A0A0C4DH34 MIR4273-201ENST00000582824 84 ntBASIC2.71□□□□□ -1.98
IGHV4-28A0A0C4DH34 MIR5187-201ENST00000583479 76 ntBASIC2.71□□□□□ -1.98
IGHV4-28A0A0C4DH34 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC2.71□□□□□ -1.98
IGHV4-28A0A0C4DH34 BNIP3P22-201ENST00000593399 556 ntBASIC2.71□□□□□ -1.98
IGHV4-28A0A0C4DH34 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.71□□□□□ -1.98
IGHV4-28A0A0C4DH34 SNORA62.6-201ENST00000606322 83 ntBASIC2.71□□□□□ -1.98
IGHV4-28A0A0C4DH34 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC2.71□□□□□ -1.98
IGHV4-28A0A0C4DH34 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.71□□□□□ -1.98
IGHV4-28A0A0C4DH34 AC244205.2-202ENST00000635781 342 ntBASIC2.71□□□□□ -1.98
IGHV4-28A0A0C4DH34 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC2.71□□□□□ -1.98
IGHV4-28A0A0C4DH34 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
IGHV4-28A0A0C4DH34 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
IGHV4-28A0A0C4DH34 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
IGHV4-28A0A0C4DH34 AC008725.1-201ENST00000605123 2263 ntBASIC2.71□□□□□ -1.98
IGHV4-28A0A0C4DH34 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.71□□□□□ -1.98
IGHV4-28A0A0C4DH34 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.71□□□□□ -1.98
IGHV4-28A0A0C4DH34 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC2.71□□□□□ -1.98
IGHV4-28A0A0C4DH34 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.71□□□□□ -1.98
IGHV4-28A0A0C4DH34 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
IGHV4-28A0A0C4DH34 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
IGHV4-28A0A0C4DH34 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
IGHV4-28A0A0C4DH34 RNU6-1115P-201ENST00000362490 106 ntBASIC2.7□□□□□ -1.98
IGHV4-28A0A0C4DH34 RNA5SP502-201ENST00000362694 119 ntBASIC2.7□□□□□ -1.98
IGHV4-28A0A0C4DH34 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.7□□□□□ -1.98
IGHV4-28A0A0C4DH34 MIR670-201ENST00000390142 98 ntBASIC2.7□□□□□ -1.98
IGHV4-28A0A0C4DH34 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
IGHV4-28A0A0C4DH34 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
IGHV4-28A0A0C4DH34 RNU2-49P-201ENST00000410666 184 ntBASIC2.7□□□□□ -1.98
IGHV4-28A0A0C4DH34 AC096664.2-201ENST00000411843 406 ntBASIC2.7□□□□□ -1.98
IGHV4-28A0A0C4DH34 AL035423.1-201ENST00000420331 213 ntBASIC2.7□□□□□ -1.98
IGHV4-28A0A0C4DH34 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC2.7□□□□□ -1.98
IGHV4-28A0A0C4DH34 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC2.7□□□□□ -1.98
IGHV4-28A0A0C4DH34 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms