Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 Z75746.1-201ENST00000440243 2080 ntBASIC2.22□□□□□ -2.05
RNF6Q9Y252 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
RNF6Q9Y252 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.05
RNF6Q9Y252 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
RNF6Q9Y252 ZNF720P1-201ENST00000562403 1939 ntBASIC2.21□□□□□ -2.06
RNF6Q9Y252 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
RNF6Q9Y252 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
RNF6Q9Y252 RNA5SP125-201ENST00000364843 120 ntBASIC2.21□□□□□ -2.06
RNF6Q9Y252 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.21□□□□□ -2.06
RNF6Q9Y252 MIR144-201ENST00000384886 86 ntBASIC2.21□□□□□ -2.06
RNF6Q9Y252 MIR518D-201ENST00000385014 87 ntBASIC2.21□□□□□ -2.06
RNF6Q9Y252 SNORA40.3-201ENST00000390964 122 ntBASIC2.21□□□□□ -2.06
RNF6Q9Y252 MIR1302-8-201ENST00000408342 128 ntBASIC2.21□□□□□ -2.06
RNF6Q9Y252 RNA5SP425-201ENST00000410336 112 ntBASIC2.21□□□□□ -2.06
RNF6Q9Y252 AL135786.1-201ENST00000415892 214 ntBASIC2.21□□□□□ -2.06
RNF6Q9Y252 AC016831.2-201ENST00000417179 352 ntBASIC2.21□□□□□ -2.06
RNF6Q9Y252 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.21□□□□□ -2.06
RNF6Q9Y252 AL160275.3-201ENST00000423876 471 ntBASIC2.21□□□□□ -2.06
RNF6Q9Y252 MED13P1-201ENST00000428342 171 ntBASIC2.21□□□□□ -2.06
RNF6Q9Y252 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC2.21□□□□□ -2.06
RNF6Q9Y252 RPL7P34-201ENST00000433316 712 ntBASIC2.21□□□□□ -2.06
RNF6Q9Y252 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
RNF6Q9Y252 AC003071.1-201ENST00000451219 789 ntBASIC2.21□□□□□ -2.06
RNF6Q9Y252 snoU109.2-201ENST00000459316 135 ntBASIC2.21□□□□□ -2.06
RNF6Q9Y252 AC112771.1-201ENST00000463581 102 ntBASIC2.21□□□□□ -2.06
RNF6Q9Y252 RPL23AP45-201ENST00000476406 468 ntBASIC2.21□□□□□ -2.06
RNF6Q9Y252 RAP1BP2-201ENST00000478270 544 ntBASIC2.21□□□□□ -2.06
RNF6Q9Y252 RPS29P21-201ENST00000496272 170 ntBASIC2.21□□□□□ -2.06
RNF6Q9Y252 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC2.21□□□□□ -2.06
RNF6Q9Y252 Vault.3-201ENST00000516676 95 ntBASIC2.21□□□□□ -2.06
RNF6Q9Y252 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC2.21□□□□□ -2.06
RNF6Q9Y252 AP000873.5-201ENST00000533906 236 ntBASIC2.21□□□□□ -2.06
RNF6Q9Y252 AC092325.1-201ENST00000566449 554 ntBASIC2.21□□□□□ -2.06
RNF6Q9Y252 AL451064.1-201ENST00000607718 471 ntBASIC2.21□□□□□ -2.06
RNF6Q9Y252 AC005332.10-201ENST00000612725 619 ntBASIC2.21□□□□□ -2.06
RNF6Q9Y252 AC120349.3-201ENST00000624377 529 ntBASIC2.21□□□□□ -2.06
RNF6Q9Y252 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
RNF6Q9Y252 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
RNF6Q9Y252 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
RNF6Q9Y252 AC069528.2-201ENST00000624849 1991 ntBASIC2.2□□□□□ -2.06
RNF6Q9Y252 MIRLET7G-201ENST00000362280 84 ntBASIC2.2□□□□□ -2.06
RNF6Q9Y252 SNORD3E-201ENST00000362899 217 ntBASIC2.2□□□□□ -2.06
RNF6Q9Y252 U8.3-201ENST00000363321 132 ntBASIC2.2□□□□□ -2.06
RNF6Q9Y252 SNORA75B-201ENST00000384053 137 ntBASIC2.2□□□□□ -2.06
RNF6Q9Y252 MIR504-201ENST00000385065 83 ntBASIC2.2□□□□□ -2.06
RNF6Q9Y252 SNORA26.8-201ENST00000391306 124 ntBASIC2.2□□□□□ -2.06
RNF6Q9Y252 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC2.2□□□□□ -2.06
RNF6Q9Y252 AL359511.1-201ENST00000402970 211 ntBASIC2.2□□□□□ -2.06
RNF6Q9Y252 HMGN1P14-201ENST00000412459 517 ntBASIC2.2□□□□□ -2.06
RNF6Q9Y252 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.2□□□□□ -2.06
RNF6Q9Y252 AC097463.2-201ENST00000421074 142 ntBASIC2.2□□□□□ -2.06
RNF6Q9Y252 PGBD4P3-201ENST00000440731 581 ntBASIC2.2□□□□□ -2.06
RNF6Q9Y252 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC2.2□□□□□ -2.06
RNF6Q9Y252 RPL7P12-201ENST00000446719 750 ntBASIC2.2□□□□□ -2.06
RNF6Q9Y252 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC2.2□□□□□ -2.06
RNF6Q9Y252 AC012308.1-201ENST00000451232 178 ntBASIC2.2□□□□□ -2.06
RNF6Q9Y252 SNRPGP9-201ENST00000456025 225 ntBASIC2.2□□□□□ -2.06
RNF6Q9Y252 snoU109.1-201ENST00000459339 135 ntBASIC2.2□□□□□ -2.06
RNF6Q9Y252 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC2.2□□□□□ -2.06
RNF6Q9Y252 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC2.2□□□□□ -2.06
RNF6Q9Y252 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC2.2□□□□□ -2.06
RNF6Q9Y252 RBBP4P6-201ENST00000508098 202 ntBASIC2.2□□□□□ -2.06
RNF6Q9Y252 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.2□□□□□ -2.06
RNF6Q9Y252 SCARNA24.1-201ENST00000516465 137 ntBASIC2.2□□□□□ -2.06
RNF6Q9Y252 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.2□□□□□ -2.06
RNF6Q9Y252 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC2.2□□□□□ -2.06
RNF6Q9Y252 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC2.2□□□□□ -2.06
RNF6Q9Y252 AC060788.1-201ENST00000521318 469 ntBASIC2.2□□□□□ -2.06
RNF6Q9Y252 OR4R1P-201ENST00000529879 463 ntBASIC2.2□□□□□ -2.06
RNF6Q9Y252 AC009063.1-201ENST00000563342 702 ntBASIC2.2□□□□□ -2.06
RNF6Q9Y252 MIR3682-201ENST00000581338 84 ntBASIC2.2□□□□□ -2.06
RNF6Q9Y252 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.2□□□□□ -2.06
RNF6Q9Y252 U6.42-201ENST00000618440 107 ntBASIC2.2□□□□□ -2.06
RNF6Q9Y252 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC2.2□□□□□ -2.06
RNF6Q9Y252 AL157786.1-207ENST00000627771 695 ntBASIC2.2□□□□□ -2.06
RNF6Q9Y252 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.2□□□□□ -2.06
RNF6Q9Y252 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.2□□□□□ -2.06
RNF6Q9Y252 ANKRD20A17P-201ENST00000511745 1330 ntBASIC2.19□□□□□ -2.06
RNF6Q9Y252 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
RNF6Q9Y252 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.19□□□□□ -2.06
RNF6Q9Y252 AC103710.2-202ENST00000641454 2853 ntBASIC2.19□□□□□ -2.06
RNF6Q9Y252 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
RNF6Q9Y252 RNU4-21P-201ENST00000362802 126 ntBASIC2.19□□□□□ -2.06
RNF6Q9Y252 RNU6-1179P-201ENST00000384667 107 ntBASIC2.19□□□□□ -2.06
RNF6Q9Y252 RNY3P10-201ENST00000384764 102 ntBASIC2.19□□□□□ -2.06
RNF6Q9Y252 FTH1P15-201ENST00000406984 280 ntBASIC2.19□□□□□ -2.06
RNF6Q9Y252 U6atac.2-201ENST00000408644 118 ntBASIC2.19□□□□□ -2.06
RNF6Q9Y252 Y_RNA.623-201ENST00000411128 95 ntBASIC2.19□□□□□ -2.06
RNF6Q9Y252 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC2.19□□□□□ -2.06
RNF6Q9Y252 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC2.19□□□□□ -2.06
RNF6Q9Y252 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.19□□□□□ -2.06
RNF6Q9Y252 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC2.19□□□□□ -2.06
RNF6Q9Y252 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.19□□□□□ -2.06
RNF6Q9Y252 AC073614.1-201ENST00000438690 650 ntBASIC2.19□□□□□ -2.06
RNF6Q9Y252 AL353705.4-201ENST00000449661 238 ntBASIC2.19□□□□□ -2.06
RNF6Q9Y252 AL033528.1-201ENST00000453780 140 ntBASIC2.19□□□□□ -2.06
RNF6Q9Y252 snoU13.15-201ENST00000459407 104 ntBASIC2.19□□□□□ -2.06
RNF6Q9Y252 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.19□□□□□ -2.06
RNF6Q9Y252 DYNLL1P5-201ENST00000467158 270 ntBASIC2.19□□□□□ -2.06
RNF6Q9Y252 AC022493.1-201ENST00000492984 337 ntBASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms