Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.44□□□□□ -2.18
SND1-IT1Q9HBX3 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC1.44□□□□□ -2.18
SND1-IT1Q9HBX3 AL365400.1-201ENST00000431854 640 ntBASIC1.44□□□□□ -2.18
SND1-IT1Q9HBX3 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC1.44□□□□□ -2.18
SND1-IT1Q9HBX3 MTND2P29-201ENST00000438595 412 ntBASIC1.44□□□□□ -2.18
SND1-IT1Q9HBX3 AL353689.1-201ENST00000438895 199 ntBASIC1.44□□□□□ -2.18
SND1-IT1Q9HBX3 DNAJC19P4-201ENST00000440115 345 ntBASIC1.44□□□□□ -2.18
SND1-IT1Q9HBX3 USP9YP15-201ENST00000442391 422 ntBASIC1.44□□□□□ -2.18
SND1-IT1Q9HBX3 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.44□□□□□ -2.18
SND1-IT1Q9HBX3 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.44□□□□□ -2.18
SND1-IT1Q9HBX3 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.44□□□□□ -2.18
SND1-IT1Q9HBX3 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.44□□□□□ -2.18
SND1-IT1Q9HBX3 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC1.44□□□□□ -2.18
SND1-IT1Q9HBX3 AC010587.1-201ENST00000505809 469 ntBASIC1.44□□□□□ -2.18
SND1-IT1Q9HBX3 AC114781.4-201ENST00000513707 639 ntBASIC1.44□□□□□ -2.18
SND1-IT1Q9HBX3 RNA5SP148-201ENST00000516527 94 ntBASIC1.44□□□□□ -2.18
SND1-IT1Q9HBX3 RPL7P20-201ENST00000520308 745 ntBASIC1.44□□□□□ -2.18
SND1-IT1Q9HBX3 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC1.44□□□□□ -2.18
SND1-IT1Q9HBX3 ELOCP32-201ENST00000548625 324 ntBASIC1.44□□□□□ -2.18
SND1-IT1Q9HBX3 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC1.44□□□□□ -2.18
SND1-IT1Q9HBX3 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC1.44□□□□□ -2.18
SND1-IT1Q9HBX3 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.44□□□□□ -2.18
SND1-IT1Q9HBX3 MIR5697-201ENST00000578045 78 ntBASIC1.44□□□□□ -2.18
SND1-IT1Q9HBX3 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC1.44□□□□□ -2.18
SND1-IT1Q9HBX3 AC008749.1-201ENST00000597650 306 ntBASIC1.44□□□□□ -2.18
SND1-IT1Q9HBX3 BNIP3P33-201ENST00000598912 569 ntBASIC1.44□□□□□ -2.18
SND1-IT1Q9HBX3 BNIP3P39-201ENST00000601077 554 ntBASIC1.44□□□□□ -2.18
SND1-IT1Q9HBX3 AC009314.1-201ENST00000603871 304 ntBASIC1.44□□□□□ -2.18
SND1-IT1Q9HBX3 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1.44□□□□□ -2.18
SND1-IT1Q9HBX3 AL356266.1-201ENST00000623311 483 ntBASIC1.44□□□□□ -2.18
SND1-IT1Q9HBX3 AC091932.3-201ENST00000624223 323 ntBASIC1.44□□□□□ -2.18
SND1-IT1Q9HBX3 AC007671.2-201ENST00000637344 619 ntBASIC1.44□□□□□ -2.18
SND1-IT1Q9HBX3 DLD-214ENST00000639772 421 ntTSL 5 BASIC1.44□□□□□ -2.18
SND1-IT1Q9HBX3 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
SND1-IT1Q9HBX3 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
SND1-IT1Q9HBX3 AP006437.1-201ENST00000641440 3685 ntBASIC1.44□□□□□ -2.18
SND1-IT1Q9HBX3 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC1.44□□□□□ -2.18
SND1-IT1Q9HBX3 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC1.43□□□□□ -2.18
SND1-IT1Q9HBX3 KPNA2P1-201ENST00000458289 1591 ntBASIC1.43□□□□□ -2.18
SND1-IT1Q9HBX3 AL359851.1-201ENST00000569460 4997 ntBASIC1.43□□□□□ -2.18
SND1-IT1Q9HBX3 AC062016.1-201ENST00000355719 319 ntBASIC1.43□□□□□ -2.18
SND1-IT1Q9HBX3 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
SND1-IT1Q9HBX3 RNU6-655P-201ENST00000362858 107 ntBASIC1.43□□□□□ -2.18
SND1-IT1Q9HBX3 RNA5SP68-201ENST00000363885 119 ntBASIC1.43□□□□□ -2.18
SND1-IT1Q9HBX3 SNORD46.1-201ENST00000364139 104 ntBASIC1.43□□□□□ -2.18
SND1-IT1Q9HBX3 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC1.43□□□□□ -2.18
SND1-IT1Q9HBX3 MIR558-201ENST00000384920 94 ntBASIC1.43□□□□□ -2.18
SND1-IT1Q9HBX3 MIR128-1-201ENST00000384921 82 ntBASIC1.43□□□□□ -2.18
SND1-IT1Q9HBX3 MIR518A2-201ENST00000384966 87 ntBASIC1.43□□□□□ -2.18
SND1-IT1Q9HBX3 SNORA48.3-201ENST00000391081 134 ntBASIC1.43□□□□□ -2.18
SND1-IT1Q9HBX3 RNA5SP338-201ENST00000410495 85 ntBASIC1.43□□□□□ -2.18
SND1-IT1Q9HBX3 RN7SKP27-201ENST00000410684 333 ntBASIC1.43□□□□□ -2.18
SND1-IT1Q9HBX3 RNA5SP184-201ENST00000411071 108 ntBASIC1.43□□□□□ -2.18
SND1-IT1Q9HBX3 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC1.43□□□□□ -2.18
SND1-IT1Q9HBX3 UBE2Q2P12-201ENST00000414573 204 ntBASIC1.43□□□□□ -2.18
SND1-IT1Q9HBX3 AL158823.1-201ENST00000418441 478 ntBASIC1.43□□□□□ -2.18
SND1-IT1Q9HBX3 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.43□□□□□ -2.18
SND1-IT1Q9HBX3 AC018634.1-201ENST00000437554 401 ntBASIC1.43□□□□□ -2.18
SND1-IT1Q9HBX3 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC1.43□□□□□ -2.18
SND1-IT1Q9HBX3 MTND5P2-201ENST00000442927 1142 ntBASIC1.43□□□□□ -2.18
SND1-IT1Q9HBX3 RPS3AP12-201ENST00000443616 753 ntBASIC1.43□□□□□ -2.18
SND1-IT1Q9HBX3 AL137159.1-201ENST00000452808 512 ntBASIC1.43□□□□□ -2.18
SND1-IT1Q9HBX3 RPL23AP3-201ENST00000453844 468 ntBASIC1.43□□□□□ -2.18
SND1-IT1Q9HBX3 snoU13.14-201ENST00000459372 104 ntBASIC1.43□□□□□ -2.18
SND1-IT1Q9HBX3 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.43□□□□□ -2.18
SND1-IT1Q9HBX3 RN7SL636P-201ENST00000497504 294 ntBASIC1.43□□□□□ -2.18
SND1-IT1Q9HBX3 AC108078.2-201ENST00000510750 236 ntBASIC1.43□□□□□ -2.18
SND1-IT1Q9HBX3 RN7SKP256-201ENST00000517201 314 ntBASIC1.43□□□□□ -2.18
SND1-IT1Q9HBX3 MRPS36P3-201ENST00000519284 130 ntBASIC1.43□□□□□ -2.18
SND1-IT1Q9HBX3 AP000763.2-201ENST00000540641 163 ntBASIC1.43□□□□□ -2.18
SND1-IT1Q9HBX3 ANP32BP3-201ENST00000559213 706 ntBASIC1.43□□□□□ -2.18
SND1-IT1Q9HBX3 AC025678.1-201ENST00000567861 338 ntBASIC1.43□□□□□ -2.18
SND1-IT1Q9HBX3 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC1.43□□□□□ -2.18
SND1-IT1Q9HBX3 MTCYBP33-201ENST00000575007 1130 ntBASIC1.43□□□□□ -2.18
SND1-IT1Q9HBX3 MIR4319-201ENST00000577285 85 ntBASIC1.43□□□□□ -2.18
SND1-IT1Q9HBX3 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC1.43□□□□□ -2.18
SND1-IT1Q9HBX3 APOOP1-201ENST00000604695 592 ntBASIC1.43□□□□□ -2.18
SND1-IT1Q9HBX3 ELOCP5-201ENST00000604924 333 ntBASIC1.43□□□□□ -2.18
SND1-IT1Q9HBX3 AL451064.1-201ENST00000607718 471 ntBASIC1.43□□□□□ -2.18
SND1-IT1Q9HBX3 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.43□□□□□ -2.18
SND1-IT1Q9HBX3 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC1.43□□□□□ -2.18
SND1-IT1Q9HBX3 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC1.43□□□□□ -2.18
SND1-IT1Q9HBX3 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC1.43□□□□□ -2.18
SND1-IT1Q9HBX3 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC1.42□□□□□ -2.18
SND1-IT1Q9HBX3 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC1.42□□□□□ -2.18
SND1-IT1Q9HBX3 ZNF702P-202ENST00000434269 1966 ntBASIC1.42□□□□□ -2.18
SND1-IT1Q9HBX3 RNU6-1214P-201ENST00000363650 109 ntBASIC1.42□□□□□ -2.18
SND1-IT1Q9HBX3 RNU6-1210P-201ENST00000363775 107 ntBASIC1.42□□□□□ -2.18
SND1-IT1Q9HBX3 U3.13-201ENST00000364804 214 ntBASIC1.42□□□□□ -2.18
SND1-IT1Q9HBX3 RNA5SP160-201ENST00000364866 120 ntBASIC1.42□□□□□ -2.18
SND1-IT1Q9HBX3 MIR23B-201ENST00000384832 97 ntBASIC1.42□□□□□ -2.18
SND1-IT1Q9HBX3 MIR29C-201ENST00000385231 88 ntBASIC1.42□□□□□ -2.18
SND1-IT1Q9HBX3 RNA5SP390-201ENST00000410191 113 ntBASIC1.42□□□□□ -2.18
SND1-IT1Q9HBX3 RNU2-23P-201ENST00000410545 195 ntBASIC1.42□□□□□ -2.18
SND1-IT1Q9HBX3 RNU6-387P-201ENST00000411331 105 ntBASIC1.42□□□□□ -2.18
SND1-IT1Q9HBX3 AC092017.2-201ENST00000427600 362 ntBASIC1.42□□□□□ -2.18
SND1-IT1Q9HBX3 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC1.42□□□□□ -2.18
SND1-IT1Q9HBX3 AL512286.1-201ENST00000439244 400 ntBASIC1.42□□□□□ -2.18
SND1-IT1Q9HBX3 CALM1P1-201ENST00000442082 433 ntBASIC1.42□□□□□ -2.18
SND1-IT1Q9HBX3 MTND6P13-201ENST00000443510 523 ntBASIC1.42□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 196.8 ms