Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 YME1L1P1-201ENST00000429435 297 ntBASIC3.1□□□□□ -1.91
NPAS1Q99742 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.1□□□□□ -1.91
NPAS1Q99742 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC3.1□□□□□ -1.91
NPAS1Q99742 HIGD1AP2-201ENST00000446367 280 ntBASIC3.1□□□□□ -1.91
NPAS1Q99742 AL358232.1-201ENST00000448030 501 ntBASIC3.1□□□□□ -1.91
NPAS1Q99742 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC3.1□□□□□ -1.91
NPAS1Q99742 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC3.1□□□□□ -1.91
NPAS1Q99742 RNU7-23P-201ENST00000459465 62 ntBASIC3.1□□□□□ -1.91
NPAS1Q99742 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.1□□□□□ -1.91
NPAS1Q99742 RPL7P43-201ENST00000478876 753 ntBASIC3.1□□□□□ -1.91
NPAS1Q99742 AC093663.1-201ENST00000497190 394 ntBASIC3.1□□□□□ -1.91
NPAS1Q99742 RPL39P5-202ENST00000512505 151 ntBASIC3.1□□□□□ -1.91
NPAS1Q99742 SNORD59.2-201ENST00000516873 68 ntBASIC3.1□□□□□ -1.91
NPAS1Q99742 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
NPAS1Q99742 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.1□□□□□ -1.91
NPAS1Q99742 AP000889.2-201ENST00000532684 490 ntBASIC3.1□□□□□ -1.91
NPAS1Q99742 AL121821.2-201ENST00000556081 394 ntBASIC3.1□□□□□ -1.91
NPAS1Q99742 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC3.1□□□□□ -1.91
NPAS1Q99742 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.1□□□□□ -1.91
NPAS1Q99742 AC104237.2-201ENST00000612456 443 ntBASIC3.1□□□□□ -1.91
NPAS1Q99742 TPTEP1-208ENST00000636884 213 ntBASIC3.1□□□□□ -1.91
NPAS1Q99742 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
NPAS1Q99742 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
NPAS1Q99742 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
NPAS1Q99742 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.1□□□□□ -1.91
NPAS1Q99742 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.09□□□□□ -1.91
NPAS1Q99742 MTCO1P12-201ENST00000414273 1543 ntBASIC3.09□□□□□ -1.91
NPAS1Q99742 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
NPAS1Q99742 AC032011.1-201ENST00000611703 1549 ntBASIC3.09□□□□□ -1.91
NPAS1Q99742 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.09□□□□□ -1.91
NPAS1Q99742 AC110491.1-201ENST00000562191 2010 ntBASIC3.09□□□□□ -1.91
NPAS1Q99742 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.09□□□□□ -1.91
NPAS1Q99742 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
NPAS1Q99742 RNU5E-7P-201ENST00000365290 117 ntBASIC3.09□□□□□ -1.91
NPAS1Q99742 RNU6-128P-201ENST00000383976 107 ntBASIC3.09□□□□□ -1.91
NPAS1Q99742 RNA5SP354-201ENST00000391247 136 ntBASIC3.09□□□□□ -1.91
NPAS1Q99742 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
NPAS1Q99742 U3.37-201ENST00000408528 213 ntBASIC3.09□□□□□ -1.91
NPAS1Q99742 RNA5SP31-201ENST00000411144 127 ntBASIC3.09□□□□□ -1.91
NPAS1Q99742 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.09□□□□□ -1.91
NPAS1Q99742 PDCL2P1-201ENST00000419302 352 ntBASIC3.09□□□□□ -1.91
NPAS1Q99742 RPS15AP5-201ENST00000436276 388 ntBASIC3.09□□□□□ -1.91
NPAS1Q99742 AL714022.1-201ENST00000439897 151 ntBASIC3.09□□□□□ -1.91
NPAS1Q99742 AL359672.1-201ENST00000442302 409 ntBASIC3.09□□□□□ -1.91
NPAS1Q99742 AL357552.1-201ENST00000445254 415 ntBASIC3.09□□□□□ -1.91
NPAS1Q99742 MRPL50P4-201ENST00000446432 475 ntBASIC3.09□□□□□ -1.91
NPAS1Q99742 NIPA2P5-201ENST00000452282 464 ntBASIC3.09□□□□□ -1.91
NPAS1Q99742 AC006026.2-201ENST00000457376 180 ntBASIC3.09□□□□□ -1.91
NPAS1Q99742 RPS4XP2-201ENST00000458402 793 ntBASIC3.09□□□□□ -1.91
NPAS1Q99742 RNU7-66P-201ENST00000459469 62 ntBASIC3.09□□□□□ -1.91
NPAS1Q99742 RN7SL283P-201ENST00000489055 303 ntBASIC3.09□□□□□ -1.91
NPAS1Q99742 RNU6-581P-201ENST00000516214 105 ntBASIC3.09□□□□□ -1.91
NPAS1Q99742 MIR2276-201ENST00000516886 89 ntBASIC3.09□□□□□ -1.91
NPAS1Q99742 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC3.09□□□□□ -1.91
NPAS1Q99742 AC104576.1-201ENST00000524225 88 ntBASIC3.09□□□□□ -1.91
NPAS1Q99742 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.09□□□□□ -1.91
NPAS1Q99742 AC021739.1-201ENST00000559631 174 ntBASIC3.09□□□□□ -1.91
NPAS1Q99742 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.09□□□□□ -1.91
NPAS1Q99742 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC3.09□□□□□ -1.91
NPAS1Q99742 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.09□□□□□ -1.91
NPAS1Q99742 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC3.09□□□□□ -1.91
NPAS1Q99742 AC138761.3-201ENST00000579993 334 ntBASIC3.09□□□□□ -1.91
NPAS1Q99742 MIR3672-201ENST00000584290 82 ntBASIC3.09□□□□□ -1.91
NPAS1Q99742 AC008739.3-201ENST00000603262 127 ntBASIC3.09□□□□□ -1.91
NPAS1Q99742 AC011890.2-201ENST00000613393 294 ntBASIC3.09□□□□□ -1.91
NPAS1Q99742 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.09□□□□□ -1.91
NPAS1Q99742 USP12-203ENST00000620323 349 ntTSL 3 BASIC3.09□□□□□ -1.91
NPAS1Q99742 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.09□□□□□ -1.91
NPAS1Q99742 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
NPAS1Q99742 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
NPAS1Q99742 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.09□□□□□ -1.91
NPAS1Q99742 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.09□□□□□ -1.92
NPAS1Q99742 AL356274.2-201ENST00000624379 3752 ntBASIC3.09□□□□□ -1.92
NPAS1Q99742 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
NPAS1Q99742 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.08□□□□□ -1.92
NPAS1Q99742 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.08□□□□□ -1.92
NPAS1Q99742 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.08□□□□□ -1.92
NPAS1Q99742 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
NPAS1Q99742 RNU6-562P-201ENST00000362731 107 ntBASIC3.08□□□□□ -1.92
NPAS1Q99742 Y_RNA.166-201ENST00000363730 102 ntBASIC3.08□□□□□ -1.92
NPAS1Q99742 RNU6-72P-201ENST00000384285 79 ntBASIC3.08□□□□□ -1.92
NPAS1Q99742 SNORD73A-201ENST00000386062 65 ntBASIC3.08□□□□□ -1.92
NPAS1Q99742 AL445529.1-201ENST00000398713 389 ntBASIC3.08□□□□□ -1.92
NPAS1Q99742 AL356432.1-201ENST00000405809 419 ntBASIC3.08□□□□□ -1.92
NPAS1Q99742 AL096701.2-201ENST00000416920 238 ntBASIC3.08□□□□□ -1.92
NPAS1Q99742 AC097713.2-201ENST00000430199 356 ntBASIC3.08□□□□□ -1.92
NPAS1Q99742 AC098831.1-201ENST00000440661 216 ntBASIC3.08□□□□□ -1.92
NPAS1Q99742 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC3.08□□□□□ -1.92
NPAS1Q99742 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.08□□□□□ -1.92
NPAS1Q99742 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC3.08□□□□□ -1.92
NPAS1Q99742 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC3.08□□□□□ -1.92
NPAS1Q99742 AC092001.1-201ENST00000453012 261 ntBASIC3.08□□□□□ -1.92
NPAS1Q99742 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC3.08□□□□□ -1.92
NPAS1Q99742 MTND1P11-201ENST00000456661 876 ntBASIC3.08□□□□□ -1.92
NPAS1Q99742 AC026801.1-201ENST00000497178 464 ntBASIC3.08□□□□□ -1.92
NPAS1Q99742 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.08□□□□□ -1.92
NPAS1Q99742 RNU6-377P-201ENST00000515965 102 ntBASIC3.08□□□□□ -1.92
NPAS1Q99742 SNORA31.21-201ENST00000517180 77 ntBASIC3.08□□□□□ -1.92
NPAS1Q99742 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
NPAS1Q99742 MIR4790-201ENST00000577799 79 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms