Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 RNU6-778P-201ENST00000363269 103 ntBASIC2.66□□□□□ -1.98
CDCA3Q99618 RNU6-799P-201ENST00000363567 107 ntBASIC2.66□□□□□ -1.98
CDCA3Q99618 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
CDCA3Q99618 Y_RNA.409-201ENST00000383990 98 ntBASIC2.66□□□□□ -1.98
CDCA3Q99618 HMGN2P35-201ENST00000412164 270 ntBASIC2.66□□□□□ -1.98
CDCA3Q99618 USP9YP6-201ENST00000413550 854 ntBASIC2.66□□□□□ -1.98
CDCA3Q99618 OR51A5P-201ENST00000415429 942 ntBASIC2.66□□□□□ -1.98
CDCA3Q99618 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC2.66□□□□□ -1.98
CDCA3Q99618 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC2.66□□□□□ -1.98
CDCA3Q99618 AL160275.3-201ENST00000423876 471 ntBASIC2.66□□□□□ -1.98
CDCA3Q99618 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC2.66□□□□□ -1.98
CDCA3Q99618 RPS29P6-201ENST00000438196 145 ntBASIC2.66□□□□□ -1.98
CDCA3Q99618 DNAJC19P4-201ENST00000440115 345 ntBASIC2.66□□□□□ -1.98
CDCA3Q99618 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC2.66□□□□□ -1.98
CDCA3Q99618 AL162395.1-201ENST00000457882 422 ntBASIC2.66□□□□□ -1.98
CDCA3Q99618 RNU7-23P-201ENST00000459465 62 ntBASIC2.66□□□□□ -1.98
CDCA3Q99618 AC092436.1-201ENST00000506450 503 ntBASIC2.66□□□□□ -1.98
CDCA3Q99618 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
CDCA3Q99618 RNU6-1315P-201ENST00000517187 99 ntBASIC2.66□□□□□ -1.98
CDCA3Q99618 AC025755.1-201ENST00000521306 278 ntBASIC2.66□□□□□ -1.98
CDCA3Q99618 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC2.66□□□□□ -1.98
CDCA3Q99618 AC084851.1-201ENST00000529105 249 ntBASIC2.66□□□□□ -1.98
CDCA3Q99618 RANP3-201ENST00000530970 276 ntBASIC2.66□□□□□ -1.98
CDCA3Q99618 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC2.66□□□□□ -1.98
CDCA3Q99618 MIR1273D-201ENST00000577266 86 ntBASIC2.66□□□□□ -1.98
CDCA3Q99618 DEFB131E-202ENST00000602581 683 ntBASIC2.66□□□□□ -1.98
CDCA3Q99618 AC024940.5-201ENST00000622889 474 ntBASIC2.66□□□□□ -1.98
CDCA3Q99618 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
CDCA3Q99618 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.65□□□□□ -1.99
CDCA3Q99618 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.65□□□□□ -1.99
CDCA3Q99618 RNU6-1287P-201ENST00000362914 107 ntBASIC2.65□□□□□ -1.99
CDCA3Q99618 Y_RNA.381-201ENST00000365666 102 ntBASIC2.65□□□□□ -1.99
CDCA3Q99618 RNU6-116P-201ENST00000384042 109 ntBASIC2.65□□□□□ -1.99
CDCA3Q99618 RNU6-1029P-201ENST00000384109 107 ntBASIC2.65□□□□□ -1.99
CDCA3Q99618 RNU6-1060P-201ENST00000384664 107 ntBASIC2.65□□□□□ -1.99
CDCA3Q99618 AL591416.1-201ENST00000404015 867 ntBASIC2.65□□□□□ -1.99
CDCA3Q99618 RNU6-387P-201ENST00000411331 105 ntBASIC2.65□□□□□ -1.99
CDCA3Q99618 AC007064.1-201ENST00000412238 351 ntBASIC2.65□□□□□ -1.99
CDCA3Q99618 USP9YP20-201ENST00000419224 558 ntBASIC2.65□□□□□ -1.99
CDCA3Q99618 AL353193.1-201ENST00000421444 268 ntBASIC2.65□□□□□ -1.99
CDCA3Q99618 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC2.65□□□□□ -1.99
CDCA3Q99618 MTND1P1-201ENST00000445453 368 ntBASIC2.65□□□□□ -1.99
CDCA3Q99618 AC104389.3-201ENST00000445629 235 ntBASIC2.65□□□□□ -1.99
CDCA3Q99618 GSTA11P-201ENST00000452866 669 ntBASIC2.65□□□□□ -1.99
CDCA3Q99618 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC2.65□□□□□ -1.99
CDCA3Q99618 AP004217.1-201ENST00000480579 346 ntBASIC2.65□□□□□ -1.99
CDCA3Q99618 AC082651.2-201ENST00000496833 166 ntBASIC2.65□□□□□ -1.99
CDCA3Q99618 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC2.65□□□□□ -1.99
CDCA3Q99618 AC234781.5-201ENST00000508429 271 ntBASIC2.65□□□□□ -1.99
CDCA3Q99618 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC2.65□□□□□ -1.99
CDCA3Q99618 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.65□□□□□ -1.99
CDCA3Q99618 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC2.65□□□□□ -1.99
CDCA3Q99618 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.65□□□□□ -1.99
CDCA3Q99618 MIR1273C-201ENST00000578669 77 ntBASIC2.65□□□□□ -1.99
CDCA3Q99618 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC2.65□□□□□ -1.99
CDCA3Q99618 AC012507.3-201ENST00000603556 477 ntBASIC2.65□□□□□ -1.99
CDCA3Q99618 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.65□□□□□ -1.99
CDCA3Q99618 AC107871.2-201ENST00000612894 502 ntBASIC2.65□□□□□ -1.99
CDCA3Q99618 AC004852.3-201ENST00000614131 326 ntBASIC2.65□□□□□ -1.99
CDCA3Q99618 AL359740.1-201ENST00000624340 592 ntBASIC2.65□□□□□ -1.99
CDCA3Q99618 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC2.65□□□□□ -1.99
CDCA3Q99618 U6.99-201ENST00000637524 83 ntBASIC2.65□□□□□ -1.99
CDCA3Q99618 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
CDCA3Q99618 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
CDCA3Q99618 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.64□□□□□ -1.99
CDCA3Q99618 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.64□□□□□ -1.99
CDCA3Q99618 NACAP2-201ENST00000318548 624 ntBASIC2.64□□□□□ -1.99
CDCA3Q99618 OR4G2P-201ENST00000328113 903 ntBASIC2.64□□□□□ -1.99
CDCA3Q99618 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.64□□□□□ -1.99
CDCA3Q99618 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
CDCA3Q99618 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC2.64□□□□□ -1.99
CDCA3Q99618 RNU1-109P-201ENST00000383960 147 ntBASIC2.64□□□□□ -1.99
CDCA3Q99618 RNU6-658P-201ENST00000384606 106 ntBASIC2.64□□□□□ -1.99
CDCA3Q99618 RNU6-606P-201ENST00000384721 111 ntBASIC2.64□□□□□ -1.99
CDCA3Q99618 RNU6-1025P-201ENST00000410629 104 ntBASIC2.64□□□□□ -1.99
CDCA3Q99618 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC2.64□□□□□ -1.99
CDCA3Q99618 AL353729.1-201ENST00000425044 720 ntBASIC2.64□□□□□ -1.99
CDCA3Q99618 AL365496.1-201ENST00000426885 215 ntBASIC2.64□□□□□ -1.99
CDCA3Q99618 RPL23AP45-201ENST00000476406 468 ntBASIC2.64□□□□□ -1.99
CDCA3Q99618 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.64□□□□□ -1.99
CDCA3Q99618 RPL36AP51-201ENST00000487216 318 ntBASIC2.64□□□□□ -1.99
CDCA3Q99618 RPS27AP10-201ENST00000496103 208 ntBASIC2.64□□□□□ -1.99
CDCA3Q99618 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC2.64□□□□□ -1.99
CDCA3Q99618 AC114786.4-201ENST00000508771 728 ntBASIC2.64□□□□□ -1.99
CDCA3Q99618 RNU6-720P-201ENST00000516363 108 ntBASIC2.64□□□□□ -1.99
CDCA3Q99618 RNA5SP503-201ENST00000517047 117 ntBASIC2.64□□□□□ -1.99
CDCA3Q99618 AC009902.1-201ENST00000519351 183 ntBASIC2.64□□□□□ -1.99
CDCA3Q99618 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.64□□□□□ -1.99
CDCA3Q99618 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.64□□□□□ -1.99
CDCA3Q99618 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC2.64□□□□□ -1.99
CDCA3Q99618 AL157871.3-201ENST00000557231 293 ntBASIC2.64□□□□□ -1.99
CDCA3Q99618 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC2.64□□□□□ -1.99
CDCA3Q99618 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.64□□□□□ -1.99
CDCA3Q99618 AC073534.2-201ENST00000620377 381 ntBASIC2.64□□□□□ -1.99
CDCA3Q99618 AC099654.12-201ENST00000639868 649 ntBASIC2.64□□□□□ -1.99
CDCA3Q99618 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.64□□□□□ -1.99
CDCA3Q99618 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.64□□□□□ -1.99
CDCA3Q99618 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.64□□□□□ -1.99
CDCA3Q99618 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
CDCA3Q99618 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms