Protein–RNA interactions for Protein: Q6ZMZ3

SYNE3, Nesprin-3, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3Q6ZMZ3 AP000907.4-201ENST00000604143 237 ntBASIC3.32□□□□□ -1.88
SYNE3Q6ZMZ3 AL670379.4-201ENST00000605279 254 ntBASIC3.32□□□□□ -1.88
SYNE3Q6ZMZ3 AC005000.2-201ENST00000605468 310 ntBASIC3.32□□□□□ -1.88
SYNE3Q6ZMZ3 RMST_4.1-201ENST00000616886 107 ntBASIC3.32□□□□□ -1.88
SYNE3Q6ZMZ3 uc_338.34-201ENST00000617467 174 ntBASIC3.32□□□□□ -1.88
SYNE3Q6ZMZ3 AC006111.3-201ENST00000622137 383 ntBASIC3.32□□□□□ -1.88
SYNE3Q6ZMZ3 AP003122.6-201ENST00000623831 495 ntBASIC3.32□□□□□ -1.88
SYNE3Q6ZMZ3 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SYNE3Q6ZMZ3 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.31□□□□□ -1.88
SYNE3Q6ZMZ3 OR4G1P-203ENST00000641984 1631 ntBASIC3.31□□□□□ -1.88
SYNE3Q6ZMZ3 Y_RNA.167-201ENST00000363735 109 ntBASIC3.31□□□□□ -1.88
SYNE3Q6ZMZ3 RNU6-522P-201ENST00000364497 107 ntBASIC3.31□□□□□ -1.88
SYNE3Q6ZMZ3 RNU6-715P-201ENST00000365204 103 ntBASIC3.31□□□□□ -1.88
SYNE3Q6ZMZ3 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
SYNE3Q6ZMZ3 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
SYNE3Q6ZMZ3 SNORA16.2-201ENST00000390991 127 ntBASIC3.31□□□□□ -1.88
SYNE3Q6ZMZ3 SNORA40C-201ENST00000391285 128 ntBASIC3.31□□□□□ -1.88
SYNE3Q6ZMZ3 AL606923.1-201ENST00000406616 190 ntBASIC3.31□□□□□ -1.88
SYNE3Q6ZMZ3 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC3.31□□□□□ -1.88
SYNE3Q6ZMZ3 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC3.31□□□□□ -1.88
SYNE3Q6ZMZ3 AC099548.1-201ENST00000421443 426 ntBASIC3.31□□□□□ -1.88
SYNE3Q6ZMZ3 SKA2P1-201ENST00000425592 390 ntBASIC3.31□□□□□ -1.88
SYNE3Q6ZMZ3 AC098614.2-201ENST00000426040 255 ntBASIC3.31□□□□□ -1.88
SYNE3Q6ZMZ3 RPS29P6-201ENST00000438196 145 ntBASIC3.31□□□□□ -1.88
SYNE3Q6ZMZ3 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.31□□□□□ -1.88
SYNE3Q6ZMZ3 AL714022.1-201ENST00000439897 151 ntBASIC3.31□□□□□ -1.88
SYNE3Q6ZMZ3 AC010099.1-201ENST00000455434 375 ntBASIC3.31□□□□□ -1.88
SYNE3Q6ZMZ3 RPL12P25-201ENST00000455592 494 ntBASIC3.31□□□□□ -1.88
SYNE3Q6ZMZ3 RPS29P26-201ENST00000477483 171 ntBASIC3.31□□□□□ -1.88
SYNE3Q6ZMZ3 AC069439.1-201ENST00000494739 167 ntBASIC3.31□□□□□ -1.88
SYNE3Q6ZMZ3 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC3.31□□□□□ -1.88
SYNE3Q6ZMZ3 AC008716.1-201ENST00000511084 513 ntBASIC3.31□□□□□ -1.88
SYNE3Q6ZMZ3 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC3.31□□□□□ -1.88
SYNE3Q6ZMZ3 RNU2-69P-201ENST00000516061 100 ntBASIC3.31□□□□□ -1.88
SYNE3Q6ZMZ3 RNU6-358P-201ENST00000516564 75 ntBASIC3.31□□□□□ -1.88
SYNE3Q6ZMZ3 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC3.31□□□□□ -1.88
SYNE3Q6ZMZ3 AL391261.3-201ENST00000557194 520 ntBASIC3.31□□□□□ -1.88
SYNE3Q6ZMZ3 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.31□□□□□ -1.88
SYNE3Q6ZMZ3 LRRC37A5P-203ENST00000580181 585 ntBASIC3.31□□□□□ -1.88
SYNE3Q6ZMZ3 AC060780.3-201ENST00000589464 80 ntBASIC3.31□□□□□ -1.88
SYNE3Q6ZMZ3 NRBF2P5-201ENST00000603087 788 ntBASIC3.31□□□□□ -1.88
SYNE3Q6ZMZ3 AL355598.1-201ENST00000604169 202 ntBASIC3.31□□□□□ -1.88
SYNE3Q6ZMZ3 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3.31□□□□□ -1.88
SYNE3Q6ZMZ3 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
SYNE3Q6ZMZ3 AL161431.1-201ENST00000618966 4205 ntBASIC3.31□□□□□ -1.88
SYNE3Q6ZMZ3 AC092593.1-201ENST00000515413 1815 ntBASIC3.3□□□□□ -1.88
SYNE3Q6ZMZ3 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SYNE3Q6ZMZ3 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
SYNE3Q6ZMZ3 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC3.3□□□□□ -1.88
SYNE3Q6ZMZ3 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.3□□□□□ -1.88
SYNE3Q6ZMZ3 RNU6-373P-201ENST00000411247 98 ntBASIC3.3□□□□□ -1.88
SYNE3Q6ZMZ3 AL353621.1-201ENST00000418219 243 ntBASIC3.3□□□□□ -1.88
SYNE3Q6ZMZ3 AL139132.1-201ENST00000431587 344 ntBASIC3.3□□□□□ -1.88
SYNE3Q6ZMZ3 MTND3P16-201ENST00000452205 344 ntBASIC3.3□□□□□ -1.88
SYNE3Q6ZMZ3 SCARNA18-201ENST00000459004 134 ntBASIC3.3□□□□□ -1.88
SYNE3Q6ZMZ3 HMGN2P26-201ENST00000463169 339 ntBASIC3.3□□□□□ -1.88
SYNE3Q6ZMZ3 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC3.3□□□□□ -1.88
SYNE3Q6ZMZ3 AC112206.3-201ENST00000514578 389 ntBASIC3.3□□□□□ -1.88
SYNE3Q6ZMZ3 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.3□□□□□ -1.88
SYNE3Q6ZMZ3 MTND4P7-201ENST00000523876 130 ntBASIC3.3□□□□□ -1.88
SYNE3Q6ZMZ3 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.3□□□□□ -1.88
SYNE3Q6ZMZ3 AP000867.2-201ENST00000532468 320 ntBASIC3.3□□□□□ -1.88
SYNE3Q6ZMZ3 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.3□□□□□ -1.88
SYNE3Q6ZMZ3 OR11H5P-201ENST00000554039 926 ntBASIC3.3□□□□□ -1.88
SYNE3Q6ZMZ3 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC3.3□□□□□ -1.88
SYNE3Q6ZMZ3 ZNF861P-201ENST00000588126 639 ntBASIC3.3□□□□□ -1.88
SYNE3Q6ZMZ3 AC010525.2-201ENST00000590920 195 ntBASIC3.3□□□□□ -1.88
SYNE3Q6ZMZ3 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.3□□□□□ -1.88
SYNE3Q6ZMZ3 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.3□□□□□ -1.88
SYNE3Q6ZMZ3 AC022418.1-201ENST00000624118 445 ntBASIC3.3□□□□□ -1.88
SYNE3Q6ZMZ3 AP003400.5-201ENST00000624827 617 ntBASIC3.3□□□□□ -1.88
SYNE3Q6ZMZ3 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SYNE3Q6ZMZ3 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.3□□□□□ -1.88
SYNE3Q6ZMZ3 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC3.3□□□□□ -1.88
SYNE3Q6ZMZ3 MTND4P14-201ENST00000435799 1354 ntBASIC3.29□□□□□ -1.88
SYNE3Q6ZMZ3 MIR412-201ENST00000362142 91 ntBASIC3.29□□□□□ -1.88
SYNE3Q6ZMZ3 MIR26A1-201ENST00000362205 77 ntBASIC3.29□□□□□ -1.88
SYNE3Q6ZMZ3 MIR181A2-201ENST00000384863 110 ntBASIC3.29□□□□□ -1.88
SYNE3Q6ZMZ3 RPL21P75-201ENST00000396599 483 ntBASIC3.29□□□□□ -1.88
SYNE3Q6ZMZ3 RPL21P28-201ENST00000401418 483 ntBASIC3.29□□□□□ -1.88
SYNE3Q6ZMZ3 RNU6-1025P-201ENST00000410629 104 ntBASIC3.29□□□□□ -1.88
SYNE3Q6ZMZ3 RNA5SP492-201ENST00000411330 114 ntBASIC3.29□□□□□ -1.88
SYNE3Q6ZMZ3 RNA5SP111-201ENST00000411386 101 ntBASIC3.29□□□□□ -1.88
SYNE3Q6ZMZ3 NDUFS5P4-201ENST00000412983 318 ntBASIC3.29□□□□□ -1.88
SYNE3Q6ZMZ3 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC3.29□□□□□ -1.88
SYNE3Q6ZMZ3 MTND1P23-201ENST00000416931 372 ntBASIC3.29□□□□□ -1.88
SYNE3Q6ZMZ3 ARL5AP1-201ENST00000418991 388 ntBASIC3.29□□□□□ -1.88
SYNE3Q6ZMZ3 SAR1AP4-201ENST00000429225 591 ntBASIC3.29□□□□□ -1.88
SYNE3Q6ZMZ3 HMGB1P9-201ENST00000429856 646 ntBASIC3.29□□□□□ -1.88
SYNE3Q6ZMZ3 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.29□□□□□ -1.88
SYNE3Q6ZMZ3 HMGB1P31-201ENST00000437242 427 ntBASIC3.29□□□□□ -1.88
SYNE3Q6ZMZ3 AL513043.1-201ENST00000439124 535 ntBASIC3.29□□□□□ -1.88
SYNE3Q6ZMZ3 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.29□□□□□ -1.88
SYNE3Q6ZMZ3 NFU1P2-201ENST00000448700 469 ntBASIC3.29□□□□□ -1.88
SYNE3Q6ZMZ3 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.29□□□□□ -1.88
SYNE3Q6ZMZ3 RPL21P39-201ENST00000463605 483 ntBASIC3.29□□□□□ -1.88
SYNE3Q6ZMZ3 RPL21P93-201ENST00000480465 489 ntBASIC3.29□□□□□ -1.88
SYNE3Q6ZMZ3 AC087190.1-201ENST00000484462 480 ntBASIC3.29□□□□□ -1.88
SYNE3Q6ZMZ3 AC093591.1-201ENST00000491435 481 ntBASIC3.29□□□□□ -1.88
SYNE3Q6ZMZ3 AC139453.3-201ENST00000493276 369 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 132.4 ms