Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 BTF3P7-201ENST00000407097 488 ntBASIC2.23□□□□□ -2.05
XRCC1P18887 OOSP1P1-201ENST00000423265 274 ntBASIC2.23□□□□□ -2.05
XRCC1P18887 AC007560.1-201ENST00000426912 237 ntBASIC2.23□□□□□ -2.05
XRCC1P18887 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC2.23□□□□□ -2.05
XRCC1P18887 AC073614.1-201ENST00000438690 650 ntBASIC2.23□□□□□ -2.05
XRCC1P18887 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.23□□□□□ -2.05
XRCC1P18887 BTF3P15-201ENST00000455606 336 ntBASIC2.23□□□□□ -2.05
XRCC1P18887 SNORD42A-201ENST00000459584 64 ntBASIC2.23□□□□□ -2.05
XRCC1P18887 RAP1BP2-201ENST00000478270 544 ntBASIC2.23□□□□□ -2.05
XRCC1P18887 AC116655.1-201ENST00000508324 901 ntBASIC2.23□□□□□ -2.05
XRCC1P18887 AC108078.2-201ENST00000510750 236 ntBASIC2.23□□□□□ -2.05
XRCC1P18887 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC2.23□□□□□ -2.05
XRCC1P18887 SNORA31.6-201ENST00000516241 130 ntBASIC2.23□□□□□ -2.05
XRCC1P18887 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC2.23□□□□□ -2.05
XRCC1P18887 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC2.23□□□□□ -2.05
XRCC1P18887 AC087883.1-201ENST00000551882 391 ntBASIC2.23□□□□□ -2.05
XRCC1P18887 AC026464.5-201ENST00000562497 722 ntBASIC2.23□□□□□ -2.05
XRCC1P18887 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.23□□□□□ -2.05
XRCC1P18887 MIR1273D-201ENST00000577266 86 ntBASIC2.23□□□□□ -2.05
XRCC1P18887 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC2.23□□□□□ -2.05
XRCC1P18887 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.23□□□□□ -2.05
XRCC1P18887 Z94722.1-201ENST00000604328 474 ntBASIC2.23□□□□□ -2.05
XRCC1P18887 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.23□□□□□ -2.05
XRCC1P18887 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.23□□□□□ -2.05
XRCC1P18887 AC019226.2-201ENST00000625973 424 ntBASIC2.23□□□□□ -2.05
XRCC1P18887 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.23□□□□□ -2.05
XRCC1P18887 U8.2-201ENST00000363156 134 ntBASIC2.22□□□□□ -2.05
XRCC1P18887 RNU6-641P-201ENST00000384006 107 ntBASIC2.22□□□□□ -2.05
XRCC1P18887 RNU1-52P-201ENST00000384190 164 ntBASIC2.22□□□□□ -2.05
XRCC1P18887 SNORA40.3-201ENST00000390964 122 ntBASIC2.22□□□□□ -2.05
XRCC1P18887 AL591416.1-201ENST00000404015 867 ntBASIC2.22□□□□□ -2.05
XRCC1P18887 RN7SKP223-201ENST00000410582 62 ntBASIC2.22□□□□□ -2.05
XRCC1P18887 RNU6-1328P-201ENST00000410938 106 ntBASIC2.22□□□□□ -2.05
XRCC1P18887 RNU6-387P-201ENST00000411331 105 ntBASIC2.22□□□□□ -2.05
XRCC1P18887 MTND1P23-201ENST00000416931 372 ntBASIC2.22□□□□□ -2.05
XRCC1P18887 NPM1P11-201ENST00000417106 855 ntBASIC2.22□□□□□ -2.05
XRCC1P18887 DPH3P2-201ENST00000422618 250 ntBASIC2.22□□□□□ -2.05
XRCC1P18887 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.22□□□□□ -2.05
XRCC1P18887 AL139415.2-201ENST00000431968 163 ntBASIC2.22□□□□□ -2.05
XRCC1P18887 RPS15AP28-201ENST00000435088 386 ntBASIC2.22□□□□□ -2.05
XRCC1P18887 AC018634.1-201ENST00000437554 401 ntBASIC2.22□□□□□ -2.05
XRCC1P18887 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.22□□□□□ -2.05
XRCC1P18887 AC092001.1-201ENST00000453012 261 ntBASIC2.22□□□□□ -2.05
XRCC1P18887 SNRPGP9-201ENST00000456025 225 ntBASIC2.22□□□□□ -2.05
XRCC1P18887 MTND3P7-201ENST00000474435 343 ntBASIC2.22□□□□□ -2.05
XRCC1P18887 AC023194.1-201ENST00000493084 308 ntBASIC2.22□□□□□ -2.05
XRCC1P18887 ANXA2P1-201ENST00000505539 926 ntBASIC2.22□□□□□ -2.05
XRCC1P18887 SCARNA3-201ENST00000517097 143 ntBASIC2.22□□□□□ -2.05
XRCC1P18887 MTCYBP20-201ENST00000524239 1129 ntBASIC2.22□□□□□ -2.05
XRCC1P18887 AP003072.2-201ENST00000527756 676 ntBASIC2.22□□□□□ -2.05
XRCC1P18887 AL158211.1-201ENST00000566763 763 ntBASIC2.22□□□□□ -2.05
XRCC1P18887 MIR5694-201ENST00000581190 76 ntBASIC2.22□□□□□ -2.05
XRCC1P18887 MIR4765-201ENST00000585007 77 ntBASIC2.22□□□□□ -2.05
XRCC1P18887 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.22□□□□□ -2.05
XRCC1P18887 AC087045.1-201ENST00000605856 382 ntBASIC2.22□□□□□ -2.05
XRCC1P18887 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.22□□□□□ -2.05
XRCC1P18887 AC012409.4-201ENST00000612923 249 ntBASIC2.22□□□□□ -2.05
XRCC1P18887 AC138649.3-201ENST00000622154 254 ntBASIC2.22□□□□□ -2.05
XRCC1P18887 MIR6766-201ENST00000622641 72 ntBASIC2.22□□□□□ -2.05
XRCC1P18887 AC024940.5-201ENST00000622889 474 ntBASIC2.22□□□□□ -2.05
XRCC1P18887 MTND5P6-201ENST00000422338 1798 ntBASIC2.22□□□□□ -2.05
XRCC1P18887 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.22□□□□□ -2.05
XRCC1P18887 AL359854.1-201ENST00000614203 1594 ntBASIC2.22□□□□□ -2.05
XRCC1P18887 AL109809.4-201ENST00000603520 2185 ntBASIC2.22□□□□□ -2.05
XRCC1P18887 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
XRCC1P18887 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
XRCC1P18887 MIR412-201ENST00000362142 91 ntBASIC2.21□□□□□ -2.06
XRCC1P18887 RNU1-91P-201ENST00000364746 163 ntBASIC2.21□□□□□ -2.06
XRCC1P18887 RNY4P34-201ENST00000364779 95 ntBASIC2.21□□□□□ -2.06
XRCC1P18887 RNU6-169P-201ENST00000365336 107 ntBASIC2.21□□□□□ -2.06
XRCC1P18887 RNU6-166P-201ENST00000384371 107 ntBASIC2.21□□□□□ -2.06
XRCC1P18887 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.21□□□□□ -2.06
XRCC1P18887 AC114491.1-201ENST00000416095 246 ntBASIC2.21□□□□□ -2.06
XRCC1P18887 AC009518.2-201ENST00000418056 731 ntBASIC2.21□□□□□ -2.06
XRCC1P18887 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.21□□□□□ -2.06
XRCC1P18887 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC2.21□□□□□ -2.06
XRCC1P18887 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.21□□□□□ -2.06
XRCC1P18887 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.21□□□□□ -2.06
XRCC1P18887 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC2.21□□□□□ -2.06
XRCC1P18887 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.21□□□□□ -2.06
XRCC1P18887 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC2.21□□□□□ -2.06
XRCC1P18887 CETN4P-201ENST00000432407 469 ntBASIC2.21□□□□□ -2.06
XRCC1P18887 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.21□□□□□ -2.06
XRCC1P18887 AC009961.2-201ENST00000435771 251 ntBASIC2.21□□□□□ -2.06
XRCC1P18887 AC104850.1-201ENST00000435940 476 ntBASIC2.21□□□□□ -2.06
XRCC1P18887 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC2.21□□□□□ -2.06
XRCC1P18887 FABP5P14-201ENST00000437273 393 ntBASIC2.21□□□□□ -2.06
XRCC1P18887 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
XRCC1P18887 AC079781.2-201ENST00000446424 169 ntBASIC2.21□□□□□ -2.06
XRCC1P18887 AL353705.4-201ENST00000449661 238 ntBASIC2.21□□□□□ -2.06
XRCC1P18887 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.21□□□□□ -2.06
XRCC1P18887 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC2.21□□□□□ -2.06
XRCC1P18887 AC080013.2-201ENST00000460866 323 ntBASIC2.21□□□□□ -2.06
XRCC1P18887 RPL22P13-201ENST00000493291 347 ntBASIC2.21□□□□□ -2.06
XRCC1P18887 AC023141.11-201ENST00000508864 202 ntBASIC2.21□□□□□ -2.06
XRCC1P18887 RNA5SP112-201ENST00000515937 99 ntBASIC2.21□□□□□ -2.06
XRCC1P18887 RNU6-581P-201ENST00000516214 105 ntBASIC2.21□□□□□ -2.06
XRCC1P18887 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC2.21□□□□□ -2.06
XRCC1P18887 EMP1-206ENST00000537612 505 ntTSL 3 BASIC2.21□□□□□ -2.06
XRCC1P18887 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC2.21□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 123.2 ms