Protein–RNA interactions for Protein: O95639

CPSF4, Cleavage and polyadenylation specificity factor subunit 4, humanhuman

Known RBP Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4O95639 NRBF2P1-201ENST00000587407 859 ntBASIC1.48□□□□□ -2.17
CPSF4O95639 AC121334.2-201ENST00000605387 271 ntBASIC1.48□□□□□ -2.17
CPSF4O95639 AL365204.3-201ENST00000612448 685 ntBASIC1.48□□□□□ -2.17
CPSF4O95639 AL512643.1-201ENST00000635735 524 ntBASIC1.48□□□□□ -2.17
CPSF4O95639 MTND5P42-201ENST00000637720 498 ntBASIC1.48□□□□□ -2.17
CPSF4O95639 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
CPSF4O95639 AL445523.1-201ENST00000451184 1362 ntBASIC1.47□□□□□ -2.17
CPSF4O95639 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC1.47□□□□□ -2.17
CPSF4O95639 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC1.47□□□□□ -2.17
CPSF4O95639 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.47□□□□□ -2.17
CPSF4O95639 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
CPSF4O95639 RNU6-500P-201ENST00000362349 107 ntBASIC1.47□□□□□ -2.17
CPSF4O95639 RNU6-501P-201ENST00000364072 100 ntBASIC1.47□□□□□ -2.17
CPSF4O95639 RNU6-533P-201ENST00000384144 107 ntBASIC1.47□□□□□ -2.17
CPSF4O95639 Y_RNA.534-201ENST00000384599 112 ntBASIC1.47□□□□□ -2.17
CPSF4O95639 USP9YP6-201ENST00000413550 854 ntBASIC1.47□□□□□ -2.17
CPSF4O95639 AC092809.3-201ENST00000415453 231 ntBASIC1.47□□□□□ -2.17
CPSF4O95639 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC1.47□□□□□ -2.17
CPSF4O95639 CYCSP48-201ENST00000417124 323 ntBASIC1.47□□□□□ -2.17
CPSF4O95639 RPS15AP12-201ENST00000419498 388 ntBASIC1.47□□□□□ -2.17
CPSF4O95639 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC1.47□□□□□ -2.17
CPSF4O95639 AL593851.1-201ENST00000426171 157 ntBASIC1.47□□□□□ -2.17
CPSF4O95639 PTGES3P4-201ENST00000426243 356 ntBASIC1.47□□□□□ -2.17
CPSF4O95639 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC1.47□□□□□ -2.17
CPSF4O95639 RPL30P4-201ENST00000429309 333 ntBASIC1.47□□□□□ -2.17
CPSF4O95639 AL365184.2-201ENST00000431139 435 ntBASIC1.47□□□□□ -2.17
CPSF4O95639 FABP5P14-201ENST00000437273 393 ntBASIC1.47□□□□□ -2.17
CPSF4O95639 MTCYBP39-201ENST00000437562 491 ntBASIC1.47□□□□□ -2.17
CPSF4O95639 AC004383.1-201ENST00000438135 289 ntBASIC1.47□□□□□ -2.17
CPSF4O95639 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC1.47□□□□□ -2.17
CPSF4O95639 AP001324.2-201ENST00000461163 319 ntBASIC1.47□□□□□ -2.17
CPSF4O95639 DYNLL1P5-201ENST00000467158 270 ntBASIC1.47□□□□□ -2.17
CPSF4O95639 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
CPSF4O95639 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC1.47□□□□□ -2.17
CPSF4O95639 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC1.47□□□□□ -2.17
CPSF4O95639 AF131216.2-201ENST00000512316 564 ntBASIC1.47□□□□□ -2.17
CPSF4O95639 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC1.47□□□□□ -2.17
CPSF4O95639 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC1.47□□□□□ -2.17
CPSF4O95639 RN7SKP265-201ENST00000516448 223 ntBASIC1.47□□□□□ -2.17
CPSF4O95639 RNU6-295P-201ENST00000516901 104 ntBASIC1.47□□□□□ -2.17
CPSF4O95639 RNU6-1092P-201ENST00000516955 87 ntBASIC1.47□□□□□ -2.17
CPSF4O95639 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1.47□□□□□ -2.17
CPSF4O95639 CBX3P4-201ENST00000538909 354 ntBASIC1.47□□□□□ -2.17
CPSF4O95639 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC1.47□□□□□ -2.17
CPSF4O95639 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC1.47□□□□□ -2.17
CPSF4O95639 MIR5571-201ENST00000577998 113 ntBASIC1.47□□□□□ -2.17
CPSF4O95639 MIR4765-201ENST00000585007 77 ntBASIC1.47□□□□□ -2.17
CPSF4O95639 AC008749.1-201ENST00000597650 306 ntBASIC1.47□□□□□ -2.17
CPSF4O95639 AC234772.3-201ENST00000602277 528 ntBASIC1.47□□□□□ -2.17
CPSF4O95639 AC105129.3-201ENST00000605455 485 ntBASIC1.47□□□□□ -2.17
CPSF4O95639 AC130324.3-201ENST00000614165 542 ntBASIC1.47□□□□□ -2.17
CPSF4O95639 AC091834.1-201ENST00000614543 472 ntBASIC1.47□□□□□ -2.17
CPSF4O95639 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC1.47□□□□□ -2.17
CPSF4O95639 AC104010.1-201ENST00000616889 150 ntBASIC1.47□□□□□ -2.17
CPSF4O95639 MIR6134-201ENST00000617606 109 ntBASIC1.47□□□□□ -2.17
CPSF4O95639 FRG1KP-201ENST00000623592 341 ntBASIC1.47□□□□□ -2.17
CPSF4O95639 MIR7157-201ENST00000635801 60 ntBASIC1.47□□□□□ -2.17
CPSF4O95639 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC1.47□□□□□ -2.17
CPSF4O95639 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC1.47□□□□□ -2.17
CPSF4O95639 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.47□□□□□ -2.17
CPSF4O95639 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
CPSF4O95639 RNU5F-6P-201ENST00000362979 116 ntBASIC1.46□□□□□ -2.18
CPSF4O95639 SNORA4.3-201ENST00000365564 137 ntBASIC1.46□□□□□ -2.18
CPSF4O95639 MIR147B-201ENST00000390185 80 ntBASIC1.46□□□□□ -2.18
CPSF4O95639 AC011233.1-201ENST00000422812 283 ntBASIC1.46□□□□□ -2.18
CPSF4O95639 BX510359.4-201ENST00000423750 193 ntBASIC1.46□□□□□ -2.18
CPSF4O95639 EIF4EP4-201ENST00000424916 578 ntBASIC1.46□□□□□ -2.18
CPSF4O95639 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC1.46□□□□□ -2.18
CPSF4O95639 AL591212.2-201ENST00000433923 257 ntBASIC1.46□□□□□ -2.18
CPSF4O95639 AL008629.1-201ENST00000438615 184 ntBASIC1.46□□□□□ -2.18
CPSF4O95639 AL512286.1-201ENST00000439244 400 ntBASIC1.46□□□□□ -2.18
CPSF4O95639 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.46□□□□□ -2.18
CPSF4O95639 AL139824.2-201ENST00000458731 1095 ntBASIC1.46□□□□□ -2.18
CPSF4O95639 AC112204.1-201ENST00000502591 103 ntBASIC1.46□□□□□ -2.18
CPSF4O95639 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC1.46□□□□□ -2.18
CPSF4O95639 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.46□□□□□ -2.18
CPSF4O95639 RNU6-572P-201ENST00000516724 80 ntBASIC1.46□□□□□ -2.18
CPSF4O95639 RNU6-914P-201ENST00000516749 109 ntBASIC1.46□□□□□ -2.18
CPSF4O95639 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.46□□□□□ -2.18
CPSF4O95639 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC1.46□□□□□ -2.18
CPSF4O95639 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC1.46□□□□□ -2.18
CPSF4O95639 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC1.46□□□□□ -2.18
CPSF4O95639 PCMTD1P2-201ENST00000565017 355 ntBASIC1.46□□□□□ -2.18
CPSF4O95639 MIR4782-201ENST00000577987 79 ntBASIC1.46□□□□□ -2.18
CPSF4O95639 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC1.46□□□□□ -2.18
CPSF4O95639 MTCYBP22-201ENST00000603788 447 ntBASIC1.46□□□□□ -2.18
CPSF4O95639 AC022893.3-201ENST00000607665 437 ntBASIC1.46□□□□□ -2.18
CPSF4O95639 uc_338.14-201ENST00000613162 166 ntBASIC1.46□□□□□ -2.18
CPSF4O95639 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC1.46□□□□□ -2.18
CPSF4O95639 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
CPSF4O95639 AC091932.3-201ENST00000624223 323 ntBASIC1.46□□□□□ -2.18
CPSF4O95639 AC006927.3-201ENST00000638789 384 ntBASIC1.46□□□□□ -2.18
CPSF4O95639 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
CPSF4O95639 MTND5P30-201ENST00000452896 1731 ntBASIC1.46□□□□□ -2.18
CPSF4O95639 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
CPSF4O95639 AP000648.3-201ENST00000623539 4507 ntBASIC1.45□□□□□ -2.18
CPSF4O95639 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC1.45□□□□□ -2.18
CPSF4O95639 CDC27P3-201ENST00000635418 1910 ntBASIC1.45□□□□□ -2.18
CPSF4O95639 RNU6-960P-201ENST00000364056 120 ntBASIC1.45□□□□□ -2.18
CPSF4O95639 RNA5SP125-201ENST00000364843 120 ntBASIC1.45□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms