Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC2.05□□□□□ -2.08
TMX2-CTNND1H3BSU7 AC105313.1-201ENST00000509121 353 ntBASIC2.05□□□□□ -2.08
TMX2-CTNND1H3BSU7 HMGB3P3-201ENST00000510526 400 ntBASIC2.05□□□□□ -2.08
TMX2-CTNND1H3BSU7 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC2.05□□□□□ -2.08
TMX2-CTNND1H3BSU7 SCARNA24.1-201ENST00000516465 137 ntBASIC2.05□□□□□ -2.08
TMX2-CTNND1H3BSU7 RNU6-295P-201ENST00000516901 104 ntBASIC2.05□□□□□ -2.08
TMX2-CTNND1H3BSU7 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
TMX2-CTNND1H3BSU7 AP003072.2-201ENST00000527756 676 ntBASIC2.05□□□□□ -2.08
TMX2-CTNND1H3BSU7 HMGB1P14-201ENST00000557424 591 ntBASIC2.05□□□□□ -2.08
TMX2-CTNND1H3BSU7 MIR3609-201ENST00000582661 80 ntBASIC2.05□□□□□ -2.08
TMX2-CTNND1H3BSU7 SEPT7P9-203ENST00000604116 343 ntBASIC2.05□□□□□ -2.08
TMX2-CTNND1H3BSU7 AL161798.1-201ENST00000604630 131 ntBASIC2.05□□□□□ -2.08
TMX2-CTNND1H3BSU7 AC103710.1-201ENST00000610003 901 ntBASIC2.05□□□□□ -2.08
TMX2-CTNND1H3BSU7 DLEU2_1.1-201ENST00000612089 120 ntBASIC2.05□□□□□ -2.08
TMX2-CTNND1H3BSU7 DLEU2_1.2-201ENST00000614667 120 ntBASIC2.05□□□□□ -2.08
TMX2-CTNND1H3BSU7 AC008250.2-201ENST00000615261 205 ntBASIC2.05□□□□□ -2.08
TMX2-CTNND1H3BSU7 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC2.05□□□□□ -2.08
TMX2-CTNND1H3BSU7 AC099842.1-201ENST00000619919 596 ntBASIC2.05□□□□□ -2.08
TMX2-CTNND1H3BSU7 U2.21-201ENST00000637295 81 ntBASIC2.05□□□□□ -2.08
TMX2-CTNND1H3BSU7 AL109809.4-201ENST00000603520 2185 ntBASIC2.05□□□□□ -2.08
TMX2-CTNND1H3BSU7 HSPE1P11-201ENST00000339579 310 ntBASIC2.04□□□□□ -2.08
TMX2-CTNND1H3BSU7 RNY4P34-201ENST00000364779 95 ntBASIC2.04□□□□□ -2.08
TMX2-CTNND1H3BSU7 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.04□□□□□ -2.08
TMX2-CTNND1H3BSU7 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.04□□□□□ -2.08
TMX2-CTNND1H3BSU7 RNU6-1035P-201ENST00000384477 107 ntBASIC2.04□□□□□ -2.08
TMX2-CTNND1H3BSU7 RPS3AP36-201ENST00000398190 775 ntBASIC2.04□□□□□ -2.08
TMX2-CTNND1H3BSU7 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.04□□□□□ -2.08
TMX2-CTNND1H3BSU7 RNU6-193P-201ENST00000410977 107 ntBASIC2.04□□□□□ -2.08
TMX2-CTNND1H3BSU7 BTF3L4P1-201ENST00000413813 468 ntBASIC2.04□□□□□ -2.08
TMX2-CTNND1H3BSU7 AC114491.1-201ENST00000416095 246 ntBASIC2.04□□□□□ -2.08
TMX2-CTNND1H3BSU7 MORF4L1P6-201ENST00000418771 268 ntBASIC2.04□□□□□ -2.08
TMX2-CTNND1H3BSU7 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.04□□□□□ -2.08
TMX2-CTNND1H3BSU7 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.04□□□□□ -2.08
TMX2-CTNND1H3BSU7 TMEM167AP1-201ENST00000423409 219 ntBASIC2.04□□□□□ -2.08
TMX2-CTNND1H3BSU7 AL365496.1-201ENST00000426885 215 ntBASIC2.04□□□□□ -2.08
TMX2-CTNND1H3BSU7 RPL7L1P10-201ENST00000427790 463 ntBASIC2.04□□□□□ -2.08
TMX2-CTNND1H3BSU7 ELOCP14-201ENST00000428070 331 ntBASIC2.04□□□□□ -2.08
TMX2-CTNND1H3BSU7 USP9YP14-201ENST00000430663 563 ntBASIC2.04□□□□□ -2.08
TMX2-CTNND1H3BSU7 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC2.04□□□□□ -2.08
TMX2-CTNND1H3BSU7 AL512844.2-201ENST00000433990 593 ntBASIC2.04□□□□□ -2.08
TMX2-CTNND1H3BSU7 FARSBP1-201ENST00000435808 1778 ntBASIC2.04□□□□□ -2.08
TMX2-CTNND1H3BSU7 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC2.04□□□□□ -2.08
TMX2-CTNND1H3BSU7 ELOCP7-201ENST00000439968 331 ntBASIC2.04□□□□□ -2.08
TMX2-CTNND1H3BSU7 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC2.04□□□□□ -2.08
TMX2-CTNND1H3BSU7 AC013267.1-201ENST00000458227 267 ntBASIC2.04□□□□□ -2.08
TMX2-CTNND1H3BSU7 snoU109.1-201ENST00000459339 135 ntBASIC2.04□□□□□ -2.08
TMX2-CTNND1H3BSU7 RNA5SP182-201ENST00000516064 82 ntBASIC2.04□□□□□ -2.08
TMX2-CTNND1H3BSU7 RNU6-991P-201ENST00000516168 107 ntBASIC2.04□□□□□ -2.08
TMX2-CTNND1H3BSU7 SNORA18.6-201ENST00000516792 115 ntBASIC2.04□□□□□ -2.08
TMX2-CTNND1H3BSU7 RNU6-1092P-201ENST00000516955 87 ntBASIC2.04□□□□□ -2.08
TMX2-CTNND1H3BSU7 ATP5F1P5-201ENST00000526403 760 ntBASIC2.04□□□□□ -2.08
TMX2-CTNND1H3BSU7 OR5B19P-201ENST00000531766 928 ntBASIC2.04□□□□□ -2.08
TMX2-CTNND1H3BSU7 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC2.04□□□□□ -2.08
TMX2-CTNND1H3BSU7 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.04□□□□□ -2.08
TMX2-CTNND1H3BSU7 AC068135.2-201ENST00000569293 1028 ntBASIC2.04□□□□□ -2.08
TMX2-CTNND1H3BSU7 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC2.04□□□□□ -2.08
TMX2-CTNND1H3BSU7 NBR2-204ENST00000587322 63 ntBASIC2.04□□□□□ -2.08
TMX2-CTNND1H3BSU7 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC2.04□□□□□ -2.08
TMX2-CTNND1H3BSU7 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.04□□□□□ -2.08
TMX2-CTNND1H3BSU7 AL161729.4-201ENST00000604650 476 ntBASIC2.04□□□□□ -2.08
TMX2-CTNND1H3BSU7 FTX_3.1-201ENST00000610451 147 ntBASIC2.04□□□□□ -2.08
TMX2-CTNND1H3BSU7 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
TMX2-CTNND1H3BSU7 AC010378.1-201ENST00000619270 362 ntBASIC2.04□□□□□ -2.08
TMX2-CTNND1H3BSU7 AC136475.10-201ENST00000620253 385 ntBASIC2.04□□□□□ -2.08
TMX2-CTNND1H3BSU7 AP003399.1-201ENST00000637534 361 ntBASIC2.04□□□□□ -2.08
TMX2-CTNND1H3BSU7 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.04□□□□□ -2.08
TMX2-CTNND1H3BSU7 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
TMX2-CTNND1H3BSU7 AL356292.1-201ENST00000283110 373 ntBASIC2.03□□□□□ -2.08
TMX2-CTNND1H3BSU7 RNU6-1167P-201ENST00000363227 94 ntBASIC2.03□□□□□ -2.08
TMX2-CTNND1H3BSU7 RNU6-282P-201ENST00000365357 103 ntBASIC2.03□□□□□ -2.08
TMX2-CTNND1H3BSU7 RNU6-1119P-201ENST00000384349 108 ntBASIC2.03□□□□□ -2.08
TMX2-CTNND1H3BSU7 SNORA67.3-201ENST00000384366 140 ntBASIC2.03□□□□□ -2.08
TMX2-CTNND1H3BSU7 Y_RNA.534-201ENST00000384599 112 ntBASIC2.03□□□□□ -2.08
TMX2-CTNND1H3BSU7 AL031779.1-201ENST00000415663 330 ntBASIC2.03□□□□□ -2.08
TMX2-CTNND1H3BSU7 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.03□□□□□ -2.08
TMX2-CTNND1H3BSU7 AC099548.1-201ENST00000421443 426 ntBASIC2.03□□□□□ -2.08
TMX2-CTNND1H3BSU7 ISCA1P6-201ENST00000427740 390 ntBASIC2.03□□□□□ -2.08
TMX2-CTNND1H3BSU7 AC007919.1-201ENST00000429380 217 ntBASIC2.03□□□□□ -2.08
TMX2-CTNND1H3BSU7 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC2.03□□□□□ -2.08
TMX2-CTNND1H3BSU7 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.03□□□□□ -2.08
TMX2-CTNND1H3BSU7 RPS15AP9-201ENST00000439856 381 ntBASIC2.03□□□□□ -2.08
TMX2-CTNND1H3BSU7 AC007677.1-201ENST00000445757 515 ntBASIC2.03□□□□□ -2.08
TMX2-CTNND1H3BSU7 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC2.03□□□□□ -2.08
TMX2-CTNND1H3BSU7 AL021397.1-201ENST00000451806 248 ntBASIC2.03□□□□□ -2.08
TMX2-CTNND1H3BSU7 SNORD97-201ENST00000459187 142 ntBASIC2.03□□□□□ -2.08
TMX2-CTNND1H3BSU7 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC2.03□□□□□ -2.08
TMX2-CTNND1H3BSU7 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC2.03□□□□□ -2.08
TMX2-CTNND1H3BSU7 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC2.03□□□□□ -2.08
TMX2-CTNND1H3BSU7 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC2.03□□□□□ -2.08
TMX2-CTNND1H3BSU7 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC2.03□□□□□ -2.08
TMX2-CTNND1H3BSU7 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC2.03□□□□□ -2.08
TMX2-CTNND1H3BSU7 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.03□□□□□ -2.08
TMX2-CTNND1H3BSU7 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC2.03□□□□□ -2.08
TMX2-CTNND1H3BSU7 AC040904.1-201ENST00000590850 223 ntBASIC2.03□□□□□ -2.08
TMX2-CTNND1H3BSU7 AL365204.3-201ENST00000612448 685 ntBASIC2.03□□□□□ -2.08
TMX2-CTNND1H3BSU7 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
TMX2-CTNND1H3BSU7 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
TMX2-CTNND1H3BSU7 TPTE2P4-201ENST00000258589 1605 ntBASIC2.02□□□□□ -2.09
TMX2-CTNND1H3BSU7 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
TMX2-CTNND1H3BSU7 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms