Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 IPO8P1-201ENST00000455509 3109 ntBASIC4.24□□□□□ -1.73
PDLIM7Q9NR12 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.24□□□□□ -1.73
PDLIM7Q9NR12 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
PDLIM7Q9NR12 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
PDLIM7Q9NR12 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
PDLIM7Q9NR12 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.23□□□□□ -1.73
PDLIM7Q9NR12 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
PDLIM7Q9NR12 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
PDLIM7Q9NR12 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
PDLIM7Q9NR12 AC008669.1-201ENST00000565823 2178 ntBASIC4.23□□□□□ -1.73
PDLIM7Q9NR12 MTND5P7-201ENST00000413558 1798 ntBASIC4.23□□□□□ -1.73
PDLIM7Q9NR12 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
PDLIM7Q9NR12 RNY3P11-201ENST00000364153 102 ntBASIC4.23□□□□□ -1.73
PDLIM7Q9NR12 Y_RNA.324-201ENST00000365165 102 ntBASIC4.23□□□□□ -1.73
PDLIM7Q9NR12 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
PDLIM7Q9NR12 Y_RNA.447-201ENST00000384184 113 ntBASIC4.23□□□□□ -1.73
PDLIM7Q9NR12 RNU6-1179P-201ENST00000384667 107 ntBASIC4.23□□□□□ -1.73
PDLIM7Q9NR12 RNU6-713P-201ENST00000384761 107 ntBASIC4.23□□□□□ -1.73
PDLIM7Q9NR12 Y_RNA.577-201ENST00000384794 101 ntBASIC4.23□□□□□ -1.73
PDLIM7Q9NR12 RPL21P1-201ENST00000399532 476 ntBASIC4.23□□□□□ -1.73
PDLIM7Q9NR12 AL353621.1-201ENST00000418219 243 ntBASIC4.23□□□□□ -1.73
PDLIM7Q9NR12 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC4.23□□□□□ -1.73
PDLIM7Q9NR12 DAP3P1-201ENST00000441522 278 ntBASIC4.23□□□□□ -1.73
PDLIM7Q9NR12 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC4.23□□□□□ -1.73
PDLIM7Q9NR12 RPL32P34-201ENST00000486380 400 ntBASIC4.23□□□□□ -1.73
PDLIM7Q9NR12 RPS15AP34-201ENST00000487776 387 ntBASIC4.23□□□□□ -1.73
PDLIM7Q9NR12 AC113155.1-201ENST00000511141 769 ntBASIC4.23□□□□□ -1.73
PDLIM7Q9NR12 APOOP4-201ENST00000513530 597 ntBASIC4.23□□□□□ -1.73
PDLIM7Q9NR12 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.23□□□□□ -1.73
PDLIM7Q9NR12 AC022695.1-201ENST00000522089 237 ntBASIC4.23□□□□□ -1.73
PDLIM7Q9NR12 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
PDLIM7Q9NR12 AC040926.1-201ENST00000530195 238 ntBASIC4.23□□□□□ -1.73
PDLIM7Q9NR12 CBX3P8-201ENST00000532412 525 ntBASIC4.23□□□□□ -1.73
PDLIM7Q9NR12 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.23□□□□□ -1.73
PDLIM7Q9NR12 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.23□□□□□ -1.73
PDLIM7Q9NR12 MIR4273-201ENST00000582824 84 ntBASIC4.23□□□□□ -1.73
PDLIM7Q9NR12 AC078899.3-201ENST00000599065 212 ntBASIC4.23□□□□□ -1.73
PDLIM7Q9NR12 AL109918.3-201ENST00000603072 338 ntBASIC4.23□□□□□ -1.73
PDLIM7Q9NR12 SNORA62.6-201ENST00000606322 83 ntBASIC4.23□□□□□ -1.73
PDLIM7Q9NR12 AC015813.4-201ENST00000610469 179 ntBASIC4.23□□□□□ -1.73
PDLIM7Q9NR12 AC034102.8-201ENST00000615146 484 ntBASIC4.23□□□□□ -1.73
PDLIM7Q9NR12 AC078938.1-201ENST00000620993 318 ntBASIC4.23□□□□□ -1.73
PDLIM7Q9NR12 AC048347.1-201ENST00000624621 427 ntBASIC4.23□□□□□ -1.73
PDLIM7Q9NR12 AL512643.1-201ENST00000635735 524 ntBASIC4.23□□□□□ -1.73
PDLIM7Q9NR12 Z99571.1-201ENST00000636677 394 ntBASIC4.23□□□□□ -1.73
PDLIM7Q9NR12 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
PDLIM7Q9NR12 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
PDLIM7Q9NR12 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
PDLIM7Q9NR12 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
PDLIM7Q9NR12 AC009812.4-201ENST00000569134 1805 ntBASIC4.23□□□□□ -1.73
PDLIM7Q9NR12 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.23□□□□□ -1.73
PDLIM7Q9NR12 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.22□□□□□ -1.73
PDLIM7Q9NR12 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
PDLIM7Q9NR12 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.22□□□□□ -1.73
PDLIM7Q9NR12 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
PDLIM7Q9NR12 UBE2L2-201ENST00000254302 429 ntBASIC4.22□□□□□ -1.73
PDLIM7Q9NR12 RNU4-42P-201ENST00000364738 142 ntBASIC4.22□□□□□ -1.73
PDLIM7Q9NR12 Y_RNA.288-201ENST00000364854 92 ntBASIC4.22□□□□□ -1.73
PDLIM7Q9NR12 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
PDLIM7Q9NR12 MIR128-1-201ENST00000384921 82 ntBASIC4.22□□□□□ -1.73
PDLIM7Q9NR12 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
PDLIM7Q9NR12 AL138885.1-201ENST00000405921 675 ntBASIC4.22□□□□□ -1.73
PDLIM7Q9NR12 RNU6-325P-201ENST00000411132 105 ntBASIC4.22□□□□□ -1.73
PDLIM7Q9NR12 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC4.22□□□□□ -1.73
PDLIM7Q9NR12 MTCO1P39-201ENST00000426148 480 ntBASIC4.22□□□□□ -1.73
PDLIM7Q9NR12 AC073587.1-201ENST00000447093 876 ntBASIC4.22□□□□□ -1.73
PDLIM7Q9NR12 AL049873.1-201ENST00000480540 376 ntBASIC4.22□□□□□ -1.73
PDLIM7Q9NR12 RAC1P2-201ENST00000511164 579 ntBASIC4.22□□□□□ -1.73
PDLIM7Q9NR12 RNU6-408P-201ENST00000515910 100 ntBASIC4.22□□□□□ -1.73
PDLIM7Q9NR12 RNA5SP468-201ENST00000516782 93 ntBASIC4.22□□□□□ -1.73
PDLIM7Q9NR12 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC4.22□□□□□ -1.73
PDLIM7Q9NR12 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC4.22□□□□□ -1.73
PDLIM7Q9NR12 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC4.22□□□□□ -1.73
PDLIM7Q9NR12 AC125232.2-201ENST00000592457 143 ntBASIC4.22□□□□□ -1.73
PDLIM7Q9NR12 AL355810.1-201ENST00000614629 552 ntBASIC4.22□□□□□ -1.73
PDLIM7Q9NR12 AL591424.2-201ENST00000617023 128 ntBASIC4.22□□□□□ -1.73
PDLIM7Q9NR12 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC4.22□□□□□ -1.73
PDLIM7Q9NR12 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.22□□□□□ -1.73
PDLIM7Q9NR12 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
PDLIM7Q9NR12 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
PDLIM7Q9NR12 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
PDLIM7Q9NR12 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.22□□□□□ -1.73
PDLIM7Q9NR12 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.21□□□□□ -1.73
PDLIM7Q9NR12 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.73
PDLIM7Q9NR12 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
PDLIM7Q9NR12 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
PDLIM7Q9NR12 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC4.21□□□□□ -1.74
PDLIM7Q9NR12 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
PDLIM7Q9NR12 AC007685.1-201ENST00000329806 452 ntBASIC4.21□□□□□ -1.74
PDLIM7Q9NR12 RNY1P16-201ENST00000363063 111 ntBASIC4.21□□□□□ -1.74
PDLIM7Q9NR12 Y_RNA.222-201ENST00000364264 102 ntBASIC4.21□□□□□ -1.74
PDLIM7Q9NR12 RNU6-472P-201ENST00000384299 107 ntBASIC4.21□□□□□ -1.74
PDLIM7Q9NR12 RNU6ATAC10P-201ENST00000408635 111 ntBASIC4.21□□□□□ -1.74
PDLIM7Q9NR12 RNU2-37P-201ENST00000410695 177 ntBASIC4.21□□□□□ -1.74
PDLIM7Q9NR12 AL356968.1-201ENST00000416622 474 ntBASIC4.21□□□□□ -1.74
PDLIM7Q9NR12 AC079780.1-201ENST00000428259 207 ntBASIC4.21□□□□□ -1.74
PDLIM7Q9NR12 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC4.21□□□□□ -1.74
PDLIM7Q9NR12 AC008155.2-201ENST00000464337 397 ntBASIC4.21□□□□□ -1.74
PDLIM7Q9NR12 FO393415.2-201ENST00000480085 343 ntBASIC4.21□□□□□ -1.74
PDLIM7Q9NR12 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms