Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
VPS11Q9H270 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC3.93□□□□□ -1.78
VPS11Q9H270 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.93□□□□□ -1.78
VPS11Q9H270 AC090877.1-201ENST00000561418 344 ntBASIC3.93□□□□□ -1.78
VPS11Q9H270 MIR3941-201ENST00000582572 103 ntBASIC3.93□□□□□ -1.78
VPS11Q9H270 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
VPS11Q9H270 MIR6868-201ENST00000611215 58 ntBASIC3.93□□□□□ -1.78
VPS11Q9H270 AC004792.1-201ENST00000614523 137 ntBASIC3.93□□□□□ -1.78
VPS11Q9H270 AL391261.4-201ENST00000616012 481 ntBASIC3.93□□□□□ -1.78
VPS11Q9H270 MIR3653-201ENST00000625572 110 ntBASIC3.93□□□□□ -1.78
VPS11Q9H270 AP001148.1-201ENST00000624124 2359 ntBASIC3.93□□□□□ -1.78
VPS11Q9H270 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
VPS11Q9H270 AL137003.2-201ENST00000606924 2538 ntBASIC3.93□□□□□ -1.78
VPS11Q9H270 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.93□□□□□ -1.78
VPS11Q9H270 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
VPS11Q9H270 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
VPS11Q9H270 AC103710.2-202ENST00000641454 2853 ntBASIC3.92□□□□□ -1.78
VPS11Q9H270 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
VPS11Q9H270 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.92□□□□□ -1.78
VPS11Q9H270 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.92□□□□□ -1.78
VPS11Q9H270 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
VPS11Q9H270 OR56A5-201ENST00000340110 738 ntBASIC3.92□□□□□ -1.78
VPS11Q9H270 RNA5SP399-201ENST00000364003 117 ntBASIC3.92□□□□□ -1.78
VPS11Q9H270 RNY3P11-201ENST00000364153 102 ntBASIC3.92□□□□□ -1.78
VPS11Q9H270 RNU6-338P-201ENST00000383888 105 ntBASIC3.92□□□□□ -1.78
VPS11Q9H270 Y_RNA.399-201ENST00000383955 105 ntBASIC3.92□□□□□ -1.78
VPS11Q9H270 RNU6-1197P-201ENST00000391183 107 ntBASIC3.92□□□□□ -1.78
VPS11Q9H270 PTMAP5-201ENST00000393073 333 ntBASIC3.92□□□□□ -1.78
VPS11Q9H270 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.92□□□□□ -1.78
VPS11Q9H270 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC3.92□□□□□ -1.78
VPS11Q9H270 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.92□□□□□ -1.78
VPS11Q9H270 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.92□□□□□ -1.78
VPS11Q9H270 AC009237.8-201ENST00000445492 379 ntBASIC3.92□□□□□ -1.78
VPS11Q9H270 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC3.92□□□□□ -1.78
VPS11Q9H270 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC3.92□□□□□ -1.78
VPS11Q9H270 RPS20P22-201ENST00000473700 357 ntBASIC3.92□□□□□ -1.78
VPS11Q9H270 AC026979.1-201ENST00000492525 396 ntBASIC3.92□□□□□ -1.78
VPS11Q9H270 UBE2CP3-201ENST00000502715 450 ntBASIC3.92□□□□□ -1.78
VPS11Q9H270 RNU6-927P-201ENST00000516199 100 ntBASIC3.92□□□□□ -1.78
VPS11Q9H270 SNORA40.14-201ENST00000516543 86 ntBASIC3.92□□□□□ -1.78
VPS11Q9H270 RNU6-570P-201ENST00000517051 105 ntBASIC3.92□□□□□ -1.78
VPS11Q9H270 RAB9BP1-201ENST00000519581 626 ntBASIC3.92□□□□□ -1.78
VPS11Q9H270 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
VPS11Q9H270 AC090517.1-201ENST00000569307 266 ntBASIC3.92□□□□□ -1.78
VPS11Q9H270 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.92□□□□□ -1.78
VPS11Q9H270 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
VPS11Q9H270 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC3.92□□□□□ -1.78
VPS11Q9H270 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
VPS11Q9H270 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.92□□□□□ -1.78
VPS11Q9H270 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.92□□□□□ -1.78
VPS11Q9H270 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
VPS11Q9H270 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
VPS11Q9H270 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
VPS11Q9H270 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
VPS11Q9H270 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
VPS11Q9H270 AF117829.1-206ENST00000621883 3802 ntBASIC3.91□□□□□ -1.78
VPS11Q9H270 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
VPS11Q9H270 Y_RNA.105-201ENST00000363182 111 ntBASIC3.91□□□□□ -1.78
VPS11Q9H270 RNU4-42P-201ENST00000364738 142 ntBASIC3.91□□□□□ -1.78
VPS11Q9H270 Y_RNA.314-201ENST00000365114 102 ntBASIC3.91□□□□□ -1.78
VPS11Q9H270 U1.1-201ENST00000384101 164 ntBASIC3.91□□□□□ -1.78
VPS11Q9H270 Y_RNA.478-201ENST00000384358 107 ntBASIC3.91□□□□□ -1.78
VPS11Q9H270 RNU6-125P-201ENST00000384505 107 ntBASIC3.91□□□□□ -1.78
VPS11Q9H270 RN7SKP53-201ENST00000411337 315 ntBASIC3.91□□□□□ -1.78
VPS11Q9H270 AC108032.1-201ENST00000416706 207 ntBASIC3.91□□□□□ -1.78
VPS11Q9H270 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.91□□□□□ -1.78
VPS11Q9H270 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC3.91□□□□□ -1.78
VPS11Q9H270 FCF1P4-201ENST00000448326 183 ntBASIC3.91□□□□□ -1.78
VPS11Q9H270 RNU7-167P-201ENST00000459160 62 ntBASIC3.91□□□□□ -1.78
VPS11Q9H270 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.91□□□□□ -1.78
VPS11Q9H270 MED28P2-201ENST00000475771 317 ntBASIC3.91□□□□□ -1.78
VPS11Q9H270 AC091167.1-201ENST00000492017 396 ntBASIC3.91□□□□□ -1.78
VPS11Q9H270 RPL30P5-201ENST00000494923 336 ntBASIC3.91□□□□□ -1.78
VPS11Q9H270 RNU2-69P-201ENST00000516061 100 ntBASIC3.91□□□□□ -1.78
VPS11Q9H270 RNU6-323P-201ENST00000521915 107 ntBASIC3.91□□□□□ -1.78
VPS11Q9H270 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC3.91□□□□□ -1.78
VPS11Q9H270 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC3.91□□□□□ -1.78
VPS11Q9H270 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC3.91□□□□□ -1.78
VPS11Q9H270 MIR4277-201ENST00000578298 84 ntBASIC3.91□□□□□ -1.78
VPS11Q9H270 AC093227.2-201ENST00000589357 285 ntBASIC3.91□□□□□ -1.78
VPS11Q9H270 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
VPS11Q9H270 AC002545.1-201ENST00000592511 181 ntBASIC3.91□□□□□ -1.78
VPS11Q9H270 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.91□□□□□ -1.78
VPS11Q9H270 AC068790.4-201ENST00000602474 263 ntBASIC3.91□□□□□ -1.78
VPS11Q9H270 ARF4P1-201ENST00000605447 541 ntBASIC3.91□□□□□ -1.78
VPS11Q9H270 AC009570.1-201ENST00000609599 745 ntBASIC3.91□□□□□ -1.78
VPS11Q9H270 U2.17-201ENST00000611454 95 ntBASIC3.91□□□□□ -1.78
VPS11Q9H270 MIR8059-201ENST00000620427 81 ntBASIC3.91□□□□□ -1.78
VPS11Q9H270 MIR7641-1-201ENST00000627518 61 ntBASIC3.91□□□□□ -1.78
VPS11Q9H270 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.91□□□□□ -1.78
VPS11Q9H270 U6.98-201ENST00000637157 84 ntBASIC3.91□□□□□ -1.78
VPS11Q9H270 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
VPS11Q9H270 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
VPS11Q9H270 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
VPS11Q9H270 CUL1P1-201ENST00000509510 2425 ntBASIC3.91□□□□□ -1.78
VPS11Q9H270 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
VPS11Q9H270 OTUD4P1-201ENST00000237841 3067 ntBASIC3.91□□□□□ -1.78
VPS11Q9H270 AC008669.1-201ENST00000565823 2178 ntBASIC3.9□□□□□ -1.78
VPS11Q9H270 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.9□□□□□ -1.78
VPS11Q9H270 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC3.9□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 167.5 ms