Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
SSX3Q99909 MTCYBP5-201ENST00000423752 1135 ntBASIC2.42□□□□□ -2.02
SSX3Q99909 MICF-203ENST00000432679 129 ntBASIC2.42□□□□□ -2.02
SSX3Q99909 AC236972.1-201ENST00000433225 199 ntBASIC2.42□□□□□ -2.02
SSX3Q99909 MTCO3P5-201ENST00000433620 714 ntBASIC2.42□□□□□ -2.02
SSX3Q99909 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC2.42□□□□□ -2.02
SSX3Q99909 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC2.42□□□□□ -2.02
SSX3Q99909 AC104058.1-201ENST00000448028 297 ntBASIC2.42□□□□□ -2.02
SSX3Q99909 AC132479.1-201ENST00000449160 144 ntBASIC2.42□□□□□ -2.02
SSX3Q99909 EEF1B2P7-201ENST00000451177 676 ntBASIC2.42□□□□□ -2.02
SSX3Q99909 OFD1P4Y-201ENST00000455273 1179 ntBASIC2.42□□□□□ -2.02
SSX3Q99909 AL139109.1-201ENST00000455491 297 ntBASIC2.42□□□□□ -2.02
SSX3Q99909 RNU7-182P-201ENST00000459009 62 ntBASIC2.42□□□□□ -2.02
SSX3Q99909 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC2.42□□□□□ -2.02
SSX3Q99909 AP001324.2-201ENST00000461163 319 ntBASIC2.42□□□□□ -2.02
SSX3Q99909 AC073901.1-201ENST00000462471 408 ntBASIC2.42□□□□□ -2.02
SSX3Q99909 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC2.42□□□□□ -2.02
SSX3Q99909 RN7SL633P-201ENST00000488974 297 ntBASIC2.42□□□□□ -2.02
SSX3Q99909 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC2.42□□□□□ -2.02
SSX3Q99909 AC116655.1-201ENST00000508324 901 ntBASIC2.42□□□□□ -2.02
SSX3Q99909 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC2.42□□□□□ -2.02
SSX3Q99909 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.42□□□□□ -2.02
SSX3Q99909 TBCAP3-201ENST00000512475 312 ntBASIC2.42□□□□□ -2.02
SSX3Q99909 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC2.42□□□□□ -2.02
SSX3Q99909 AC112206.3-201ENST00000514578 389 ntBASIC2.42□□□□□ -2.02
SSX3Q99909 SCGB1D5P-201ENST00000515134 247 ntBASIC2.42□□□□□ -2.02
SSX3Q99909 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.42□□□□□ -2.02
SSX3Q99909 AP002963.1-201ENST00000530590 184 ntBASIC2.42□□□□□ -2.02
SSX3Q99909 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC2.42□□□□□ -2.02
SSX3Q99909 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.42□□□□□ -2.02
SSX3Q99909 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC2.42□□□□□ -2.02
SSX3Q99909 AL138889.2-201ENST00000603883 242 ntBASIC2.42□□□□□ -2.02
SSX3Q99909 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
SSX3Q99909 AC011155.2-201ENST00000623202 216 ntBASIC2.42□□□□□ -2.02
SSX3Q99909 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC2.42□□□□□ -2.02
SSX3Q99909 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.42□□□□□ -2.02
SSX3Q99909 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.42□□□□□ -2.02
SSX3Q99909 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
SSX3Q99909 Y_RNA.51-201ENST00000362725 102 ntBASIC2.41□□□□□ -2.02
SSX3Q99909 SNORD3E-201ENST00000362899 217 ntBASIC2.41□□□□□ -2.02
SSX3Q99909 RNU4-48P-201ENST00000365559 182 ntBASIC2.41□□□□□ -2.02
SSX3Q99909 MIR578-201ENST00000384828 96 ntBASIC2.41□□□□□ -2.02
SSX3Q99909 MIR518D-201ENST00000385014 87 ntBASIC2.41□□□□□ -2.02
SSX3Q99909 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
SSX3Q99909 DEFB108C-201ENST00000400154 252 ntBASIC2.41□□□□□ -2.02
SSX3Q99909 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.41□□□□□ -2.02
SSX3Q99909 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC2.41□□□□□ -2.02
SSX3Q99909 OR6C66P-201ENST00000414917 930 ntBASIC2.41□□□□□ -2.02
SSX3Q99909 AL031779.1-201ENST00000415663 330 ntBASIC2.41□□□□□ -2.02
SSX3Q99909 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC2.41□□□□□ -2.02
SSX3Q99909 AL365338.1-201ENST00000422282 858 ntBASIC2.41□□□□□ -2.02
SSX3Q99909 BX276092.3-201ENST00000424182 230 ntBASIC2.41□□□□□ -2.02
SSX3Q99909 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
SSX3Q99909 MTCO2P11-201ENST00000431069 680 ntBASIC2.41□□□□□ -2.02
SSX3Q99909 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC2.41□□□□□ -2.02
SSX3Q99909 RPS29P6-201ENST00000438196 145 ntBASIC2.41□□□□□ -2.02
SSX3Q99909 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC2.41□□□□□ -2.02
SSX3Q99909 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.41□□□□□ -2.02
SSX3Q99909 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC2.41□□□□□ -2.02
SSX3Q99909 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.41□□□□□ -2.02
SSX3Q99909 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC2.41□□□□□ -2.02
SSX3Q99909 AL441985.1-201ENST00000457727 251 ntBASIC2.41□□□□□ -2.02
SSX3Q99909 AC117522.3-201ENST00000507974 584 ntBASIC2.41□□□□□ -2.02
SSX3Q99909 AC117522.2-201ENST00000510049 657 ntBASIC2.41□□□□□ -2.02
SSX3Q99909 AC010493.1-201ENST00000513479 292 ntBASIC2.41□□□□□ -2.02
SSX3Q99909 SNORA25.11-201ENST00000515935 105 ntBASIC2.41□□□□□ -2.02
SSX3Q99909 RNA5SP503-201ENST00000517047 117 ntBASIC2.41□□□□□ -2.02
SSX3Q99909 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.41□□□□□ -2.02
SSX3Q99909 AC107016.2-201ENST00000547968 190 ntBASIC2.41□□□□□ -2.02
SSX3Q99909 AC234778.2-201ENST00000566241 354 ntBASIC2.41□□□□□ -2.02
SSX3Q99909 MIR5692A1-201ENST00000580523 69 ntBASIC2.41□□□□□ -2.02
SSX3Q99909 MIR4775-201ENST00000581168 75 ntBASIC2.41□□□□□ -2.02
SSX3Q99909 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
SSX3Q99909 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC2.41□□□□□ -2.02
SSX3Q99909 AC069294.1-201ENST00000608397 350 ntBASIC2.41□□□□□ -2.02
SSX3Q99909 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.41□□□□□ -2.02
SSX3Q99909 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.41□□□□□ -2.02
SSX3Q99909 AL449363.1-201ENST00000617815 186 ntBASIC2.41□□□□□ -2.02
SSX3Q99909 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
SSX3Q99909 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.41□□□□□ -2.02
SSX3Q99909 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
SSX3Q99909 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.41□□□□□ -2.02
SSX3Q99909 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.41□□□□□ -2.02
SSX3Q99909 AL359854.1-201ENST00000614203 1594 ntBASIC2.4□□□□□ -2.02
SSX3Q99909 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.4□□□□□ -2.02
SSX3Q99909 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.4□□□□□ -2.03
SSX3Q99909 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.4□□□□□ -2.03
SSX3Q99909 EEF1A1P40-201ENST00000412883 573 ntBASIC2.4□□□□□ -2.03
SSX3Q99909 RPL21P90-201ENST00000415692 466 ntBASIC2.4□□□□□ -2.03
SSX3Q99909 AL627311.1-201ENST00000431514 115 ntBASIC2.4□□□□□ -2.03
SSX3Q99909 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.4□□□□□ -2.03
SSX3Q99909 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC2.4□□□□□ -2.03
SSX3Q99909 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.4□□□□□ -2.03
SSX3Q99909 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
SSX3Q99909 RPS29P15-201ENST00000458329 171 ntBASIC2.4□□□□□ -2.03
SSX3Q99909 AP001486.1-201ENST00000463339 476 ntBASIC2.4□□□□□ -2.03
SSX3Q99909 RPS3AP17-201ENST00000472594 777 ntBASIC2.4□□□□□ -2.03
SSX3Q99909 AC117440.1-201ENST00000474107 571 ntBASIC2.4□□□□□ -2.03
SSX3Q99909 RN7SL20P-201ENST00000488827 297 ntBASIC2.4□□□□□ -2.03
SSX3Q99909 AC083906.5-201ENST00000503722 328 ntBASIC2.4□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 141 ms