Protein–RNA interactions for Protein: Q99250

SCN2A, Sodium channel protein type 2 subunit alpha, humanhuman

Predictions only

Length 2,005 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2AQ99250 BPY2DP-201ENST00000422208 265 ntBASIC2.02□□□□□ -2.09
SCN2AQ99250 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC2.02□□□□□ -2.09
SCN2AQ99250 AL627311.1-201ENST00000431514 115 ntBASIC2.02□□□□□ -2.09
SCN2AQ99250 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC2.02□□□□□ -2.09
SCN2AQ99250 AL591806.2-201ENST00000433122 173 ntBASIC2.02□□□□□ -2.09
SCN2AQ99250 AC096638.1-201ENST00000444678 216 ntBASIC2.02□□□□□ -2.09
SCN2AQ99250 Z96811.1-201ENST00000445880 108 ntBASIC2.02□□□□□ -2.09
SCN2AQ99250 RAP1BP2-201ENST00000478270 544 ntBASIC2.02□□□□□ -2.09
SCN2AQ99250 AC079382.1-201ENST00000493346 557 ntBASIC2.02□□□□□ -2.09
SCN2AQ99250 AC109927.2-201ENST00000506416 303 ntBASIC2.02□□□□□ -2.09
SCN2AQ99250 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.02□□□□□ -2.09
SCN2AQ99250 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
SCN2AQ99250 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC2.02□□□□□ -2.09
SCN2AQ99250 AC093012.1-202ENST00000549403 582 ntBASIC2.02□□□□□ -2.09
SCN2AQ99250 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.02□□□□□ -2.09
SCN2AQ99250 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC2.02□□□□□ -2.09
SCN2AQ99250 AP005136.1-201ENST00000579765 429 ntBASIC2.02□□□□□ -2.09
SCN2AQ99250 AC064872.1-201ENST00000604823 1072 ntBASIC2.02□□□□□ -2.09
SCN2AQ99250 AC087752.4-201ENST00000605911 462 ntBASIC2.02□□□□□ -2.09
SCN2AQ99250 DLEU2_1.1-201ENST00000612089 120 ntBASIC2.02□□□□□ -2.09
SCN2AQ99250 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC2.02□□□□□ -2.09
SCN2AQ99250 DLEU2_1.2-201ENST00000614667 120 ntBASIC2.02□□□□□ -2.09
SCN2AQ99250 AC138649.3-201ENST00000622154 254 ntBASIC2.02□□□□□ -2.09
SCN2AQ99250 AC002064.3-201ENST00000623448 346 ntBASIC2.02□□□□□ -2.09
SCN2AQ99250 AC091953.2-201ENST00000623979 160 ntBASIC2.02□□□□□ -2.09
SCN2AQ99250 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC2.02□□□□□ -2.09
SCN2AQ99250 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.02□□□□□ -2.09
SCN2AQ99250 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.02□□□□□ -2.09
SCN2AQ99250 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.02□□□□□ -2.09
SCN2AQ99250 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
SCN2AQ99250 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
SCN2AQ99250 MIR221-201ENST00000385135 110 ntBASIC2.01□□□□□ -2.09
SCN2AQ99250 RNA5SP354-201ENST00000391247 136 ntBASIC2.01□□□□□ -2.09
SCN2AQ99250 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
SCN2AQ99250 AL139397.2-201ENST00000404529 772 ntBASIC2.01□□□□□ -2.09
SCN2AQ99250 AC127391.1-201ENST00000411737 98 ntBASIC2.01□□□□□ -2.09
SCN2AQ99250 MTND4P25-201ENST00000441039 533 ntBASIC2.01□□□□□ -2.09
SCN2AQ99250 USP9YP29-201ENST00000445112 563 ntBASIC2.01□□□□□ -2.09
SCN2AQ99250 RNA5SP269-201ENST00000459032 137 ntBASIC2.01□□□□□ -2.09
SCN2AQ99250 TRBV1-201ENST00000476502 284 ntBASIC2.01□□□□□ -2.09
SCN2AQ99250 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC2.01□□□□□ -2.09
SCN2AQ99250 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC2.01□□□□□ -2.09
SCN2AQ99250 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC2.01□□□□□ -2.09
SCN2AQ99250 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.01□□□□□ -2.09
SCN2AQ99250 AP002453.2-201ENST00000533503 320 ntBASIC2.01□□□□□ -2.09
SCN2AQ99250 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC2.01□□□□□ -2.09
SCN2AQ99250 MIR4528-201ENST00000577763 90 ntBASIC2.01□□□□□ -2.09
SCN2AQ99250 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC2.01□□□□□ -2.09
SCN2AQ99250 MIR548AB-201ENST00000584917 84 ntBASIC2.01□□□□□ -2.09
SCN2AQ99250 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.01□□□□□ -2.09
SCN2AQ99250 AC008498.1-201ENST00000613012 531 ntBASIC2.01□□□□□ -2.09
SCN2AQ99250 AL133173.2-201ENST00000614270 90 ntBASIC2.01□□□□□ -2.09
SCN2AQ99250 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC2.01□□□□□ -2.09
SCN2AQ99250 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
SCN2AQ99250 Y_RNA.194-201ENST00000363985 102 ntBASIC2.01□□□□□ -2.09
SCN2AQ99250 RNU6-641P-201ENST00000384006 107 ntBASIC2.01□□□□□ -2.09
SCN2AQ99250 RNU2-25P-201ENST00000411041 191 ntBASIC2.01□□□□□ -2.09
SCN2AQ99250 AF274854.1-201ENST00000413236 615 ntBASIC2.01□□□□□ -2.09
SCN2AQ99250 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC2.01□□□□□ -2.09
SCN2AQ99250 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.01□□□□□ -2.09
SCN2AQ99250 RPL7P54-201ENST00000438336 674 ntBASIC2.01□□□□□ -2.09
SCN2AQ99250 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC2.01□□□□□ -2.09
SCN2AQ99250 RPS15AP7-201ENST00000439294 405 ntBASIC2.01□□□□□ -2.09
SCN2AQ99250 OSTCP8-201ENST00000445117 448 ntBASIC2.01□□□□□ -2.09
SCN2AQ99250 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.01□□□□□ -2.09
SCN2AQ99250 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC2.01□□□□□ -2.09
SCN2AQ99250 KLF3P2-201ENST00000465138 268 ntBASIC2.01□□□□□ -2.09
SCN2AQ99250 RNA5SP200-201ENST00000516360 103 ntBASIC2.01□□□□□ -2.09
SCN2AQ99250 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC2.01□□□□□ -2.09
SCN2AQ99250 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC2.01□□□□□ -2.09
SCN2AQ99250 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.01□□□□□ -2.09
SCN2AQ99250 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.01□□□□□ -2.09
SCN2AQ99250 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
SCN2AQ99250 AC010678.1-201ENST00000614118 713 ntBASIC2.01□□□□□ -2.09
SCN2AQ99250 AC004696.1-201ENST00000614345 607 ntBASIC2.01□□□□□ -2.09
SCN2AQ99250 AC009509.4-201ENST00000619202 509 ntBASIC2.01□□□□□ -2.09
SCN2AQ99250 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.01□□□□□ -2.09
SCN2AQ99250 AC092656.1-203ENST00000624134 423 ntBASIC2.01□□□□□ -2.09
SCN2AQ99250 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
SCN2AQ99250 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.01□□□□□ -2.09
SCN2AQ99250 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2□□□□□ -2.09
SCN2AQ99250 CR848007.1-201ENST00000442354 1699 ntBASIC2□□□□□ -2.09
SCN2AQ99250 MTND4P35-201ENST00000604257 1375 ntBASIC2□□□□□ -2.09
SCN2AQ99250 RNU4-91P-201ENST00000364778 135 ntBASIC2□□□□□ -2.09
SCN2AQ99250 RNY4P34-201ENST00000364779 95 ntBASIC2□□□□□ -2.09
SCN2AQ99250 RNU6-533P-201ENST00000384144 107 ntBASIC2□□□□□ -2.09
SCN2AQ99250 MIR627-201ENST00000384979 97 ntBASIC2□□□□□ -2.09
SCN2AQ99250 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2□□□□□ -2.09
SCN2AQ99250 MTCYBP5-201ENST00000423752 1135 ntBASIC2□□□□□ -2.09
SCN2AQ99250 RPS15AP5-201ENST00000436276 388 ntBASIC2□□□□□ -2.09
SCN2AQ99250 AC073614.1-201ENST00000438690 650 ntBASIC2□□□□□ -2.09
SCN2AQ99250 AC132479.1-201ENST00000449160 144 ntBASIC2□□□□□ -2.09
SCN2AQ99250 AC007182.2-201ENST00000489251 402 ntBASIC2□□□□□ -2.09
SCN2AQ99250 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC2□□□□□ -2.09
SCN2AQ99250 AC117522.1-201ENST00000509821 380 ntBASIC2□□□□□ -2.09
SCN2AQ99250 MTCO3P28-201ENST00000513351 515 ntBASIC2□□□□□ -2.09
SCN2AQ99250 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC2□□□□□ -2.09
SCN2AQ99250 Y_RNA.676-201ENST00000516393 96 ntBASIC2□□□□□ -2.09
SCN2AQ99250 SNORA31.19-201ENST00000517079 126 ntBASIC2□□□□□ -2.09
SCN2AQ99250 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 171.8 ms