Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC3.99□□□□□ -1.77
PTCHD1Q96NR3 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC3.99□□□□□ -1.77
PTCHD1Q96NR3 AC023043.4-201ENST00000612081 449 ntBASIC3.99□□□□□ -1.77
PTCHD1Q96NR3 AC027309.3-201ENST00000623419 351 ntBASIC3.99□□□□□ -1.77
PTCHD1Q96NR3 U6.99-201ENST00000637524 83 ntBASIC3.99□□□□□ -1.77
PTCHD1Q96NR3 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.99□□□□□ -1.77
PTCHD1Q96NR3 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
PTCHD1Q96NR3 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
PTCHD1Q96NR3 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
PTCHD1Q96NR3 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC3.98□□□□□ -1.77
PTCHD1Q96NR3 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC3.98□□□□□ -1.77
PTCHD1Q96NR3 RNA5SP502-201ENST00000362694 119 ntBASIC3.98□□□□□ -1.77
PTCHD1Q96NR3 RNU6-78P-201ENST00000362897 107 ntBASIC3.98□□□□□ -1.77
PTCHD1Q96NR3 Y_RNA.105-201ENST00000363182 111 ntBASIC3.98□□□□□ -1.77
PTCHD1Q96NR3 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC3.98□□□□□ -1.77
PTCHD1Q96NR3 RNU6-72P-201ENST00000384285 79 ntBASIC3.98□□□□□ -1.77
PTCHD1Q96NR3 SNORA12.2-201ENST00000391040 156 ntBASIC3.98□□□□□ -1.77
PTCHD1Q96NR3 RNU6-1093P-201ENST00000391194 107 ntBASIC3.98□□□□□ -1.77
PTCHD1Q96NR3 MAP1LC3BP1-201ENST00000417653 379 ntBASIC3.98□□□□□ -1.77
PTCHD1Q96NR3 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC3.98□□□□□ -1.77
PTCHD1Q96NR3 RPL21P66-201ENST00000426566 466 ntBASIC3.98□□□□□ -1.77
PTCHD1Q96NR3 COX6B1P7-201ENST00000430845 235 ntBASIC3.98□□□□□ -1.77
PTCHD1Q96NR3 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC3.98□□□□□ -1.77
PTCHD1Q96NR3 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.98□□□□□ -1.77
PTCHD1Q96NR3 MTND4LP30-201ENST00000454092 297 ntBASIC3.98□□□□□ -1.77
PTCHD1Q96NR3 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.98□□□□□ -1.77
PTCHD1Q96NR3 AC025445.1-201ENST00000502728 300 ntBASIC3.98□□□□□ -1.77
PTCHD1Q96NR3 AC025465.3-201ENST00000510570 311 ntBASIC3.98□□□□□ -1.77
PTCHD1Q96NR3 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.98□□□□□ -1.77
PTCHD1Q96NR3 AC104581.2-201ENST00000572227 430 ntBASIC3.98□□□□□ -1.77
PTCHD1Q96NR3 AL355877.2-201ENST00000603670 358 ntBASIC3.98□□□□□ -1.77
PTCHD1Q96NR3 SMCR2_2.1-201ENST00000619783 161 ntBASIC3.98□□□□□ -1.77
PTCHD1Q96NR3 SDR42E1P4-201ENST00000620894 481 ntBASIC3.98□□□□□ -1.77
PTCHD1Q96NR3 SCARNA4-202ENST00000625402 129 ntBASIC3.98□□□□□ -1.77
PTCHD1Q96NR3 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
PTCHD1Q96NR3 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
PTCHD1Q96NR3 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.98□□□□□ -1.77
PTCHD1Q96NR3 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC3.97□□□□□ -1.77
PTCHD1Q96NR3 RLIMP1-201ENST00000339626 1680 ntBASIC3.97□□□□□ -1.77
PTCHD1Q96NR3 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC3.97□□□□□ -1.77
PTCHD1Q96NR3 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
PTCHD1Q96NR3 RNU6-212P-201ENST00000362642 104 ntBASIC3.97□□□□□ -1.77
PTCHD1Q96NR3 U3.13-201ENST00000364804 214 ntBASIC3.97□□□□□ -1.77
PTCHD1Q96NR3 Y_RNA.405-201ENST00000383979 100 ntBASIC3.97□□□□□ -1.77
PTCHD1Q96NR3 Y_RNA.451-201ENST00000384200 100 ntBASIC3.97□□□□□ -1.77
PTCHD1Q96NR3 Y_RNA.515-201ENST00000384535 112 ntBASIC3.97□□□□□ -1.77
PTCHD1Q96NR3 Y_RNA.524-201ENST00000384564 100 ntBASIC3.97□□□□□ -1.77
PTCHD1Q96NR3 Y_RNA.561-201ENST00000384694 100 ntBASIC3.97□□□□□ -1.77
PTCHD1Q96NR3 RNU6-121P-201ENST00000410525 99 ntBASIC3.97□□□□□ -1.77
PTCHD1Q96NR3 RNA5SP104-201ENST00000410989 118 ntBASIC3.97□□□□□ -1.77
PTCHD1Q96NR3 RPL21P38-201ENST00000418090 167 ntBASIC3.97□□□□□ -1.77
PTCHD1Q96NR3 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.97□□□□□ -1.77
PTCHD1Q96NR3 RPL23AP46-201ENST00000438548 490 ntBASIC3.97□□□□□ -1.77
PTCHD1Q96NR3 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC3.97□□□□□ -1.77
PTCHD1Q96NR3 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
PTCHD1Q96NR3 AC010186.2-204ENST00000537668 439 ntBASIC3.97□□□□□ -1.77
PTCHD1Q96NR3 TOMM20P2-201ENST00000540082 421 ntBASIC3.97□□□□□ -1.77
PTCHD1Q96NR3 AC007375.1-201ENST00000554513 578 ntBASIC3.97□□□□□ -1.77
PTCHD1Q96NR3 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.97□□□□□ -1.77
PTCHD1Q96NR3 B3GNTL1P2-201ENST00000603673 288 ntBASIC3.97□□□□□ -1.77
PTCHD1Q96NR3 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.97□□□□□ -1.77
PTCHD1Q96NR3 MIR8059-201ENST00000620427 81 ntBASIC3.97□□□□□ -1.77
PTCHD1Q96NR3 MIR7154-201ENST00000620673 73 ntBASIC3.97□□□□□ -1.77
PTCHD1Q96NR3 AC112200.1-201ENST00000625015 234 ntBASIC3.97□□□□□ -1.77
PTCHD1Q96NR3 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
PTCHD1Q96NR3 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.97□□□□□ -1.77
PTCHD1Q96NR3 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
PTCHD1Q96NR3 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC3.97□□□□□ -1.77
PTCHD1Q96NR3 MARK2P15-201ENST00000432204 2186 ntBASIC3.96□□□□□ -1.78
PTCHD1Q96NR3 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.96□□□□□ -1.78
PTCHD1Q96NR3 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.78
PTCHD1Q96NR3 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.96□□□□□ -1.78
PTCHD1Q96NR3 SNORA31-201ENST00000362607 130 ntBASIC3.96□□□□□ -1.78
PTCHD1Q96NR3 Y_RNA.358-201ENST00000365491 99 ntBASIC3.96□□□□□ -1.78
PTCHD1Q96NR3 Y_RNA.458-201ENST00000384240 102 ntBASIC3.96□□□□□ -1.78
PTCHD1Q96NR3 Y_RNA.478-201ENST00000384358 107 ntBASIC3.96□□□□□ -1.78
PTCHD1Q96NR3 SNORA70C-201ENST00000384538 135 ntBASIC3.96□□□□□ -1.78
PTCHD1Q96NR3 RNU4-70P-201ENST00000384579 139 ntBASIC3.96□□□□□ -1.78
PTCHD1Q96NR3 MIR325-201ENST00000385260 98 ntBASIC3.96□□□□□ -1.78
PTCHD1Q96NR3 RPS26P8-201ENST00000393490 348 ntBASIC3.96□□□□□ -1.78
PTCHD1Q96NR3 MIR1179-201ENST00000408703 91 ntBASIC3.96□□□□□ -1.78
PTCHD1Q96NR3 RNU2-64P-201ENST00000411315 191 ntBASIC3.96□□□□□ -1.78
PTCHD1Q96NR3 AC004552.1-201ENST00000419089 348 ntBASIC3.96□□□□□ -1.78
PTCHD1Q96NR3 AC139712.2-201ENST00000424302 339 ntBASIC3.96□□□□□ -1.78
PTCHD1Q96NR3 AC034236.1-201ENST00000469891 373 ntBASIC3.96□□□□□ -1.78
PTCHD1Q96NR3 RPS26P3-201ENST00000470205 348 ntBASIC3.96□□□□□ -1.78
PTCHD1Q96NR3 RPS26P28-201ENST00000470806 348 ntBASIC3.96□□□□□ -1.78
PTCHD1Q96NR3 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.96□□□□□ -1.78
PTCHD1Q96NR3 AC090543.2-201ENST00000483963 348 ntBASIC3.96□□□□□ -1.78
PTCHD1Q96NR3 AC004057.1-201ENST00000485827 348 ntBASIC3.96□□□□□ -1.78
PTCHD1Q96NR3 AC010265.1-201ENST00000513509 211 ntBASIC3.96□□□□□ -1.78
PTCHD1Q96NR3 AC099522.1-202ENST00000514718 367 ntBASIC3.96□□□□□ -1.78
PTCHD1Q96NR3 RNA5SP154-201ENST00000516193 111 ntBASIC3.96□□□□□ -1.78
PTCHD1Q96NR3 Y_RNA.673-201ENST00000516306 88 ntBASIC3.96□□□□□ -1.78
PTCHD1Q96NR3 SNORA31.18-201ENST00000517043 134 ntBASIC3.96□□□□□ -1.78
PTCHD1Q96NR3 TRAPPC2P2-201ENST00000517589 409 ntBASIC3.96□□□□□ -1.78
PTCHD1Q96NR3 AL442163.3-201ENST00000554110 156 ntBASIC3.96□□□□□ -1.78
PTCHD1Q96NR3 AC136624.4-201ENST00000573044 370 ntBASIC3.96□□□□□ -1.78
PTCHD1Q96NR3 MIR4782-201ENST00000577987 79 ntBASIC3.96□□□□□ -1.78
PTCHD1Q96NR3 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 127.2 ms