Protein–RNA interactions for Protein: Q96M19

LINC00477, Putative transmembrane protein encoded by LINC00477, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00477Q96M19 AC103710.1-201ENST00000610003 901 ntBASIC1.79□□□□□ -2.12
LINC00477Q96M19 AL589743.7-201ENST00000612637 233 ntBASIC1.79□□□□□ -2.12
LINC00477Q96M19 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
LINC00477Q96M19 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC1.79□□□□□ -2.12
LINC00477Q96M19 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
LINC00477Q96M19 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC1.79□□□□□ -2.12
LINC00477Q96M19 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
LINC00477Q96M19 AC016717.2-201ENST00000609089 5141 ntBASIC1.79□□□□□ -2.12
LINC00477Q96M19 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.78□□□□□ -2.12
LINC00477Q96M19 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.78□□□□□ -2.12
LINC00477Q96M19 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC1.78□□□□□ -2.12
LINC00477Q96M19 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC1.78□□□□□ -2.12
LINC00477Q96M19 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC1.78□□□□□ -2.12
LINC00477Q96M19 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC1.78□□□□□ -2.12
LINC00477Q96M19 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC1.78□□□□□ -2.12
LINC00477Q96M19 RNU6-960P-201ENST00000364056 120 ntBASIC1.78□□□□□ -2.12
LINC00477Q96M19 Y_RNA.245-201ENST00000364493 95 ntBASIC1.78□□□□□ -2.12
LINC00477Q96M19 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC1.78□□□□□ -2.12
LINC00477Q96M19 MIR34A-201ENST00000385130 110 ntBASIC1.78□□□□□ -2.12
LINC00477Q96M19 RNU6-780P-201ENST00000391030 104 ntBASIC1.78□□□□□ -2.12
LINC00477Q96M19 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC1.78□□□□□ -2.12
LINC00477Q96M19 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC1.78□□□□□ -2.12
LINC00477Q96M19 EEF1A1P40-201ENST00000412883 573 ntBASIC1.78□□□□□ -2.12
LINC00477Q96M19 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC1.78□□□□□ -2.12
LINC00477Q96M19 AL451074.3-201ENST00000437709 472 ntBASIC1.78□□□□□ -2.12
LINC00477Q96M19 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC1.78□□□□□ -2.12
LINC00477Q96M19 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC1.78□□□□□ -2.12
LINC00477Q96M19 C1DP4-201ENST00000455429 424 ntBASIC1.78□□□□□ -2.12
LINC00477Q96M19 MTCO2P18-201ENST00000457151 658 ntBASIC1.78□□□□□ -2.12
LINC00477Q96M19 MRPS17P3-201ENST00000465453 385 ntBASIC1.78□□□□□ -2.12
LINC00477Q96M19 RPL36AP51-201ENST00000487216 318 ntBASIC1.78□□□□□ -2.12
LINC00477Q96M19 AL160314.1-201ENST00000490836 438 ntBASIC1.78□□□□□ -2.12
LINC00477Q96M19 AC097462.2-201ENST00000504623 481 ntBASIC1.78□□□□□ -2.12
LINC00477Q96M19 MTND4P2-201ENST00000507767 1203 ntBASIC1.78□□□□□ -2.12
LINC00477Q96M19 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC1.78□□□□□ -2.12
LINC00477Q96M19 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC1.78□□□□□ -2.12
LINC00477Q96M19 RNU6-123P-201ENST00000516163 102 ntBASIC1.78□□□□□ -2.12
LINC00477Q96M19 RNA5SP320-201ENST00000516263 124 ntBASIC1.78□□□□□ -2.12
LINC00477Q96M19 Vault.3-201ENST00000516676 95 ntBASIC1.78□□□□□ -2.12
LINC00477Q96M19 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
LINC00477Q96M19 AP003122.3-201ENST00000526316 255 ntBASIC1.78□□□□□ -2.12
LINC00477Q96M19 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC1.78□□□□□ -2.12
LINC00477Q96M19 AP001646.1-201ENST00000527936 915 ntBASIC1.78□□□□□ -2.12
LINC00477Q96M19 AC084851.1-201ENST00000529105 249 ntBASIC1.78□□□□□ -2.12
LINC00477Q96M19 AP000873.5-201ENST00000533906 236 ntBASIC1.78□□□□□ -2.12
LINC00477Q96M19 AC022880.1-201ENST00000534017 973 ntBASIC1.78□□□□□ -2.12
LINC00477Q96M19 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC1.78□□□□□ -2.12
LINC00477Q96M19 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC1.78□□□□□ -2.12
LINC00477Q96M19 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC1.78□□□□□ -2.12
LINC00477Q96M19 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC1.78□□□□□ -2.12
LINC00477Q96M19 AC008521.1-201ENST00000587471 187 ntBASIC1.78□□□□□ -2.12
LINC00477Q96M19 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC1.78□□□□□ -2.12
LINC00477Q96M19 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.78□□□□□ -2.12
LINC00477Q96M19 AC025449.1-201ENST00000603896 529 ntBASIC1.78□□□□□ -2.12
LINC00477Q96M19 Z84480.1-201ENST00000605131 311 ntBASIC1.78□□□□□ -2.12
LINC00477Q96M19 AL365204.3-201ENST00000612448 685 ntBASIC1.78□□□□□ -2.12
LINC00477Q96M19 Z99129.1-201ENST00000612510 255 ntBASIC1.78□□□□□ -2.12
LINC00477Q96M19 AC091834.1-201ENST00000614543 472 ntBASIC1.78□□□□□ -2.12
LINC00477Q96M19 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
LINC00477Q96M19 AC092656.1-203ENST00000624134 423 ntBASIC1.78□□□□□ -2.12
LINC00477Q96M19 AL359740.1-201ENST00000624340 592 ntBASIC1.78□□□□□ -2.12
LINC00477Q96M19 AP003400.5-201ENST00000624827 617 ntBASIC1.78□□□□□ -2.12
LINC00477Q96M19 MIR1291-201ENST00000627649 87 ntBASIC1.78□□□□□ -2.12
LINC00477Q96M19 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC1.78□□□□□ -2.12
LINC00477Q96M19 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
LINC00477Q96M19 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC1.78□□□□□ -2.12
LINC00477Q96M19 AC080128.1-201ENST00000474389 1917 ntBASIC1.78□□□□□ -2.13
LINC00477Q96M19 FARSBP1-201ENST00000435808 1778 ntBASIC1.77□□□□□ -2.13
LINC00477Q96M19 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
LINC00477Q96M19 AK9-203ENST00000368948 2478 ntTSL 5 BASIC1.77□□□□□ -2.13
LINC00477Q96M19 AL109809.4-201ENST00000603520 2185 ntBASIC1.77□□□□□ -2.13
LINC00477Q96M19 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC1.77□□□□□ -2.13
LINC00477Q96M19 HSPE1P11-201ENST00000339579 310 ntBASIC1.77□□□□□ -2.13
LINC00477Q96M19 RNU4-24P-201ENST00000364565 139 ntBASIC1.77□□□□□ -2.13
LINC00477Q96M19 RNU6-1083P-201ENST00000384022 107 ntBASIC1.77□□□□□ -2.13
LINC00477Q96M19 MRPL42P2-201ENST00000403169 426 ntBASIC1.77□□□□□ -2.13
LINC00477Q96M19 RNU2-9P-201ENST00000410194 145 ntBASIC1.77□□□□□ -2.13
LINC00477Q96M19 RNU2-62P-201ENST00000410868 191 ntBASIC1.77□□□□□ -2.13
LINC00477Q96M19 RNA5SP184-201ENST00000411071 108 ntBASIC1.77□□□□□ -2.13
LINC00477Q96M19 AL356379.1-201ENST00000414105 126 ntBASIC1.77□□□□□ -2.13
LINC00477Q96M19 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC1.77□□□□□ -2.13
LINC00477Q96M19 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC1.77□□□□□ -2.13
LINC00477Q96M19 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC1.77□□□□□ -2.13
LINC00477Q96M19 HMGB1P9-201ENST00000429856 646 ntBASIC1.77□□□□□ -2.13
LINC00477Q96M19 MYL8P-204ENST00000431574 518 ntBASIC1.77□□□□□ -2.13
LINC00477Q96M19 RPL36AP53-201ENST00000432891 316 ntBASIC1.77□□□□□ -2.13
LINC00477Q96M19 AL591212.2-201ENST00000433923 257 ntBASIC1.77□□□□□ -2.13
LINC00477Q96M19 MTND4P25-201ENST00000441039 533 ntBASIC1.77□□□□□ -2.13
LINC00477Q96M19 AC016691.1-201ENST00000441321 413 ntBASIC1.77□□□□□ -2.13
LINC00477Q96M19 GPM6BP3-201ENST00000442797 145 ntBASIC1.77□□□□□ -2.13
LINC00477Q96M19 OSTCP8-201ENST00000445117 448 ntBASIC1.77□□□□□ -2.13
LINC00477Q96M19 AC093899.1-201ENST00000457984 376 ntBASIC1.77□□□□□ -2.13
LINC00477Q96M19 RNA5SP233-201ENST00000459153 113 ntBASIC1.77□□□□□ -2.13
LINC00477Q96M19 snoU109.1-201ENST00000459339 135 ntBASIC1.77□□□□□ -2.13
LINC00477Q96M19 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC1.77□□□□□ -2.13
LINC00477Q96M19 MTCO2P29-201ENST00000465212 189 ntBASIC1.77□□□□□ -2.13
LINC00477Q96M19 RN7SL432P-201ENST00000484057 298 ntBASIC1.77□□□□□ -2.13
LINC00477Q96M19 AC096576.1-201ENST00000489014 359 ntBASIC1.77□□□□□ -2.13
LINC00477Q96M19 AC022493.1-201ENST00000492984 337 ntBASIC1.77□□□□□ -2.13
LINC00477Q96M19 AC109927.2-201ENST00000506416 303 ntBASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms