Protein–RNA interactions for Protein: Q15858

SCN9A, Sodium channel protein type 9 subunit alpha, humanhuman

Predictions only

Length 1,988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9AQ15858 RNU6-748P-201ENST00000384648 107 ntBASIC1.39□□□□□ -2.19
SCN9AQ15858 RNU6-19P-201ENST00000384718 107 ntBASIC1.39□□□□□ -2.19
SCN9AQ15858 RNU6-278P-201ENST00000390945 109 ntBASIC1.39□□□□□ -2.19
SCN9AQ15858 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC1.39□□□□□ -2.19
SCN9AQ15858 MTCYBP38-201ENST00000417160 1123 ntBASIC1.39□□□□□ -2.19
SCN9AQ15858 AL109913.1-201ENST00000421173 514 ntBASIC1.39□□□□□ -2.19
SCN9AQ15858 SNRPEP7-201ENST00000438350 220 ntBASIC1.39□□□□□ -2.19
SCN9AQ15858 AC020550.1-201ENST00000447385 163 ntBASIC1.39□□□□□ -2.19
SCN9AQ15858 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC1.39□□□□□ -2.19
SCN9AQ15858 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC1.39□□□□□ -2.19
SCN9AQ15858 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC1.39□□□□□ -2.19
SCN9AQ15858 MRPS17P9-201ENST00000511924 393 ntBASIC1.39□□□□□ -2.19
SCN9AQ15858 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC1.39□□□□□ -2.19
SCN9AQ15858 AC009712.1-201ENST00000564938 316 ntBASIC1.39□□□□□ -2.19
SCN9AQ15858 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC1.39□□□□□ -2.19
SCN9AQ15858 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC1.39□□□□□ -2.19
SCN9AQ15858 AC025588.2-201ENST00000604851 466 ntBASIC1.39□□□□□ -2.19
SCN9AQ15858 AC092574.1-201ENST00000609771 420 ntBASIC1.39□□□□□ -2.19
SCN9AQ15858 AL158163.2-201ENST00000619110 700 ntBASIC1.39□□□□□ -2.19
SCN9AQ15858 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC1.38□□□□□ -2.19
SCN9AQ15858 RNU6-289P-201ENST00000364093 107 ntBASIC1.38□□□□□ -2.19
SCN9AQ15858 MIR520E-201ENST00000384867 87 ntBASIC1.38□□□□□ -2.19
SCN9AQ15858 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
SCN9AQ15858 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
SCN9AQ15858 AC083875.1-201ENST00000419509 405 ntBASIC1.38□□□□□ -2.19
SCN9AQ15858 AC013262.1-201ENST00000426710 252 ntBASIC1.38□□□□□ -2.19
SCN9AQ15858 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC1.38□□□□□ -2.19
SCN9AQ15858 RPL7P34-201ENST00000433316 712 ntBASIC1.38□□□□□ -2.19
SCN9AQ15858 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC1.38□□□□□ -2.19
SCN9AQ15858 AC117503.1-201ENST00000472241 394 ntBASIC1.38□□□□□ -2.19
SCN9AQ15858 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC1.38□□□□□ -2.19
SCN9AQ15858 AC114981.1-201ENST00000503897 678 ntBASIC1.38□□□□□ -2.19
SCN9AQ15858 RPF2P2-201ENST00000504693 896 ntBASIC1.38□□□□□ -2.19
SCN9AQ15858 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC1.38□□□□□ -2.19
SCN9AQ15858 RNY4P37-201ENST00000516225 96 ntBASIC1.38□□□□□ -2.19
SCN9AQ15858 DUXAP1-201ENST00000556632 463 ntBASIC1.38□□□□□ -2.19
SCN9AQ15858 AGGF1P5-201ENST00000567900 919 ntBASIC1.38□□□□□ -2.19
SCN9AQ15858 MTND3P13-201ENST00000574391 343 ntBASIC1.38□□□□□ -2.19
SCN9AQ15858 AC024619.4-201ENST00000580924 316 ntBASIC1.38□□□□□ -2.19
SCN9AQ15858 AL078603.1-201ENST00000603824 313 ntBASIC1.38□□□□□ -2.19
SCN9AQ15858 AC004908.2-201ENST00000609090 574 ntBASIC1.38□□□□□ -2.19
SCN9AQ15858 AP003476.1-201ENST00000623984 516 ntBASIC1.38□□□□□ -2.19
SCN9AQ15858 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
SCN9AQ15858 Y_RNA.472-201ENST00000384322 102 ntBASIC1.38□□□□□ -2.19
SCN9AQ15858 MIR613-201ENST00000385248 95 ntBASIC1.38□□□□□ -2.19
SCN9AQ15858 MIR1302-8-201ENST00000408342 128 ntBASIC1.38□□□□□ -2.19
SCN9AQ15858 CYCSP33-201ENST00000414485 327 ntBASIC1.38□□□□□ -2.19
SCN9AQ15858 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC1.38□□□□□ -2.19
SCN9AQ15858 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC1.38□□□□□ -2.19
SCN9AQ15858 DNAJA1P2-201ENST00000421360 1197 ntBASIC1.38□□□□□ -2.19
SCN9AQ15858 AC244035.1-201ENST00000430042 390 ntBASIC1.38□□□□□ -2.19
SCN9AQ15858 GPM6BP2-201ENST00000432046 144 ntBASIC1.38□□□□□ -2.19
SCN9AQ15858 TRBV26OR9-2-201ENST00000432077 293 ntBASIC1.38□□□□□ -2.19
SCN9AQ15858 GPM6BP1-201ENST00000446387 144 ntBASIC1.38□□□□□ -2.19
SCN9AQ15858 OARD1-209ENST00000471367 401 ntTSL 2 BASIC1.38□□□□□ -2.19
SCN9AQ15858 AC021382.1-201ENST00000483523 359 ntBASIC1.38□□□□□ -2.19
SCN9AQ15858 RPS27AP10-201ENST00000496103 208 ntBASIC1.38□□□□□ -2.19
SCN9AQ15858 MTCYBP35-201ENST00000503630 1137 ntBASIC1.38□□□□□ -2.19
SCN9AQ15858 MTND2P31-201ENST00000512602 616 ntBASIC1.38□□□□□ -2.19
SCN9AQ15858 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC1.38□□□□□ -2.19
SCN9AQ15858 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC1.38□□□□□ -2.19
SCN9AQ15858 AL133241.1-201ENST00000556832 487 ntBASIC1.38□□□□□ -2.19
SCN9AQ15858 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC1.38□□□□□ -2.19
SCN9AQ15858 AC090079.2-201ENST00000575289 768 ntBASIC1.38□□□□□ -2.19
SCN9AQ15858 AL096840.1-201ENST00000603287 93 ntBASIC1.38□□□□□ -2.19
SCN9AQ15858 AL021997.1-201ENST00000605757 193 ntBASIC1.38□□□□□ -2.19
SCN9AQ15858 RNU6-91P-201ENST00000607774 107 ntBASIC1.38□□□□□ -2.19
SCN9AQ15858 AC069294.1-201ENST00000608397 350 ntBASIC1.38□□□□□ -2.19
SCN9AQ15858 AL589743.7-201ENST00000612637 233 ntBASIC1.38□□□□□ -2.19
SCN9AQ15858 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC1.38□□□□□ -2.19
SCN9AQ15858 AC106858.1-201ENST00000637497 429 ntBASIC1.38□□□□□ -2.19
SCN9AQ15858 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.37□□□□□ -2.19
SCN9AQ15858 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.37□□□□□ -2.19
SCN9AQ15858 SNORD114-26-201ENST00000363543 72 ntBASIC1.37□□□□□ -2.19
SCN9AQ15858 MIR147B-201ENST00000390185 80 ntBASIC1.37□□□□□ -2.19
SCN9AQ15858 RNU6-516P-201ENST00000411381 104 ntBASIC1.37□□□□□ -2.19
SCN9AQ15858 UBE2FP1-201ENST00000416536 447 ntBASIC1.37□□□□□ -2.19
SCN9AQ15858 AL953862.1-201ENST00000423016 168 ntBASIC1.37□□□□□ -2.19
SCN9AQ15858 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC1.37□□□□□ -2.19
SCN9AQ15858 COX7BP2-201ENST00000437976 242 ntBASIC1.37□□□□□ -2.19
SCN9AQ15858 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC1.37□□□□□ -2.19
SCN9AQ15858 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC1.37□□□□□ -2.19
SCN9AQ15858 AC013267.1-201ENST00000458227 267 ntBASIC1.37□□□□□ -2.19
SCN9AQ15858 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC1.37□□□□□ -2.19
SCN9AQ15858 AC055731.1-201ENST00000474387 401 ntBASIC1.37□□□□□ -2.19
SCN9AQ15858 RPL36AP48-201ENST00000485521 314 ntBASIC1.37□□□□□ -2.19
SCN9AQ15858 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.37□□□□□ -2.19
SCN9AQ15858 LTV1P1-201ENST00000510683 1237 ntBASIC1.37□□□□□ -2.19
SCN9AQ15858 AC016957.1-201ENST00000534895 309 ntBASIC1.37□□□□□ -2.19
SCN9AQ15858 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC1.37□□□□□ -2.19
SCN9AQ15858 AC021739.1-201ENST00000559631 174 ntBASIC1.37□□□□□ -2.19
SCN9AQ15858 AC112220.2-201ENST00000605513 533 ntBASIC1.37□□□□□ -2.19
SCN9AQ15858 AC123767.1-202ENST00000620407 817 ntBASIC1.37□□□□□ -2.19
SCN9AQ15858 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC1.37□□□□□ -2.19
SCN9AQ15858 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.37□□□□□ -2.19
SCN9AQ15858 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
SCN9AQ15858 RNU6-778P-201ENST00000363269 103 ntBASIC1.36□□□□□ -2.19
SCN9AQ15858 RNY1-201ENST00000364228 113 ntBASIC1.36□□□□□ -2.19
SCN9AQ15858 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC1.36□□□□□ -2.19
SCN9AQ15858 AIMP1P2-201ENST00000425294 312 ntBASIC1.36□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms