Protein–RNA interactions for Protein: P48380

RFX3, Transcription factor RFX3, humanhuman

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3P48380 OARD1-209ENST00000471367 401 ntTSL 2 BASIC1.97□□□□□ -2.09
RFX3P48380 RPS27P21-201ENST00000486977 252 ntBASIC1.97□□□□□ -2.09
RFX3P48380 RPL22P13-201ENST00000493291 347 ntBASIC1.97□□□□□ -2.09
RFX3P48380 RNA5SP200-201ENST00000516360 103 ntBASIC1.97□□□□□ -2.09
RFX3P48380 SCARNA16.3-201ENST00000516595 184 ntBASIC1.97□□□□□ -2.09
RFX3P48380 SNORA31.25-201ENST00000517242 134 ntBASIC1.97□□□□□ -2.09
RFX3P48380 AC025755.1-201ENST00000521306 278 ntBASIC1.97□□□□□ -2.09
RFX3P48380 IGKV3-31-201ENST00000523109 329 ntBASIC1.97□□□□□ -2.09
RFX3P48380 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC1.97□□□□□ -2.09
RFX3P48380 MTND1P24-201ENST00000552175 861 ntBASIC1.97□□□□□ -2.09
RFX3P48380 ZNF519P3-201ENST00000557158 1032 ntBASIC1.97□□□□□ -2.09
RFX3P48380 MIR1273D-201ENST00000577266 86 ntBASIC1.97□□□□□ -2.09
RFX3P48380 MIR4782-201ENST00000577987 79 ntBASIC1.97□□□□□ -2.09
RFX3P48380 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
RFX3P48380 MIR3118-1-201ENST00000581787 76 ntBASIC1.97□□□□□ -2.09
RFX3P48380 AC006338.1-201ENST00000618453 749 ntBASIC1.97□□□□□ -2.09
RFX3P48380 AL589994.2-201ENST00000621124 579 ntBASIC1.97□□□□□ -2.09
RFX3P48380 AC091953.2-201ENST00000623979 160 ntBASIC1.97□□□□□ -2.09
RFX3P48380 Z99571.1-201ENST00000636677 394 ntBASIC1.97□□□□□ -2.09
RFX3P48380 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC1.97□□□□□ -2.09
RFX3P48380 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
RFX3P48380 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC1.96□□□□□ -2.09
RFX3P48380 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC1.96□□□□□ -2.09
RFX3P48380 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC1.96□□□□□ -2.1
RFX3P48380 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
RFX3P48380 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
RFX3P48380 HSPE1P11-201ENST00000339579 310 ntBASIC1.96□□□□□ -2.1
RFX3P48380 RNU6-1280P-201ENST00000365211 107 ntBASIC1.96□□□□□ -2.1
RFX3P48380 RNU6-898P-201ENST00000365627 104 ntBASIC1.96□□□□□ -2.1
RFX3P48380 RNU6-533P-201ENST00000384144 107 ntBASIC1.96□□□□□ -2.1
RFX3P48380 RNA5SP270-201ENST00000411361 118 ntBASIC1.96□□□□□ -2.1
RFX3P48380 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC1.96□□□□□ -2.1
RFX3P48380 DPH3P2-201ENST00000422618 250 ntBASIC1.96□□□□□ -2.1
RFX3P48380 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC1.96□□□□□ -2.1
RFX3P48380 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC1.96□□□□□ -2.1
RFX3P48380 RPL7P12-201ENST00000446719 750 ntBASIC1.96□□□□□ -2.1
RFX3P48380 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC1.96□□□□□ -2.1
RFX3P48380 PSPHP1-201ENST00000450062 261 ntBASIC1.96□□□□□ -2.1
RFX3P48380 AC003071.1-201ENST00000451219 789 ntBASIC1.96□□□□□ -2.1
RFX3P48380 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC1.96□□□□□ -2.1
RFX3P48380 RNU6-717P-201ENST00000459076 104 ntBASIC1.96□□□□□ -2.1
RFX3P48380 MTCO2P29-201ENST00000465212 189 ntBASIC1.96□□□□□ -2.1
RFX3P48380 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC1.96□□□□□ -2.1
RFX3P48380 AC055731.1-201ENST00000474387 401 ntBASIC1.96□□□□□ -2.1
RFX3P48380 RNU6-572P-201ENST00000516724 80 ntBASIC1.96□□□□□ -2.1
RFX3P48380 RNU1-40P-201ENST00000516816 164 ntBASIC1.96□□□□□ -2.1
RFX3P48380 RNU1-97P-201ENST00000516872 164 ntBASIC1.96□□□□□ -2.1
RFX3P48380 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.96□□□□□ -2.1
RFX3P48380 LINC00933-203ENST00000559812 219 ntBASIC1.96□□□□□ -2.1
RFX3P48380 AC012435.1-202ENST00000568772 240 ntBASIC1.96□□□□□ -2.1
RFX3P48380 MIR5002-201ENST00000584713 97 ntBASIC1.96□□□□□ -2.1
RFX3P48380 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
RFX3P48380 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC1.96□□□□□ -2.1
RFX3P48380 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC1.96□□□□□ -2.1
RFX3P48380 AC022202.1-201ENST00000613515 211 ntBASIC1.96□□□□□ -2.1
RFX3P48380 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC1.96□□□□□ -2.1
RFX3P48380 U4atac.1-201ENST00000618345 95 ntBASIC1.96□□□□□ -2.1
RFX3P48380 AC023510.2-201ENST00000622162 746 ntBASIC1.96□□□□□ -2.1
RFX3P48380 AC138627.2-201ENST00000624202 601 ntBASIC1.96□□□□□ -2.1
RFX3P48380 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC1.96□□□□□ -2.1
RFX3P48380 AL445523.1-201ENST00000451184 1362 ntBASIC1.96□□□□□ -2.1
RFX3P48380 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
RFX3P48380 RNU5F-6P-201ENST00000362979 116 ntBASIC1.95□□□□□ -2.1
RFX3P48380 RNA5SP138-201ENST00000365098 114 ntBASIC1.95□□□□□ -2.1
RFX3P48380 RNU4-52P-201ENST00000384209 138 ntBASIC1.95□□□□□ -2.1
RFX3P48380 Y_RNA.534-201ENST00000384599 112 ntBASIC1.95□□□□□ -2.1
RFX3P48380 CIR1P3-201ENST00000405137 479 ntBASIC1.95□□□□□ -2.1
RFX3P48380 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC1.95□□□□□ -2.1
RFX3P48380 AC010099.3-201ENST00000423896 409 ntBASIC1.95□□□□□ -2.1
RFX3P48380 AL591212.2-201ENST00000433923 257 ntBASIC1.95□□□□□ -2.1
RFX3P48380 GPM6BP3-201ENST00000442797 145 ntBASIC1.95□□□□□ -2.1
RFX3P48380 MTND5P2-201ENST00000442927 1142 ntBASIC1.95□□□□□ -2.1
RFX3P48380 AL591719.1-201ENST00000444669 744 ntBASIC1.95□□□□□ -2.1
RFX3P48380 AC112771.1-201ENST00000463581 102 ntBASIC1.95□□□□□ -2.1
RFX3P48380 AC068587.2-201ENST00000478386 781 ntBASIC1.95□□□□□ -2.1
RFX3P48380 LAMTOR3P2-201ENST00000504479 232 ntBASIC1.95□□□□□ -2.1
RFX3P48380 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC1.95□□□□□ -2.1
RFX3P48380 SNRPGP18-201ENST00000553000 214 ntBASIC1.95□□□□□ -2.1
RFX3P48380 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC1.95□□□□□ -2.1
RFX3P48380 AC026464.5-201ENST00000562497 722 ntBASIC1.95□□□□□ -2.1
RFX3P48380 MIR4648-201ENST00000580107 72 ntBASIC1.95□□□□□ -2.1
RFX3P48380 MIR3124-201ENST00000582636 67 ntBASIC1.95□□□□□ -2.1
RFX3P48380 RNU6-87P-201ENST00000607561 108 ntBASIC1.95□□□□□ -2.1
RFX3P48380 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.95□□□□□ -2.1
RFX3P48380 AC004223.4-201ENST00000612426 332 ntBASIC1.95□□□□□ -2.1
RFX3P48380 AL356266.1-201ENST00000623311 483 ntBASIC1.95□□□□□ -2.1
RFX3P48380 AL512643.1-201ENST00000635735 524 ntBASIC1.95□□□□□ -2.1
RFX3P48380 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.95□□□□□ -2.1
RFX3P48380 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
RFX3P48380 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
RFX3P48380 AC073343.1-201ENST00000328239 651 ntBASIC1.94□□□□□ -2.1
RFX3P48380 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
RFX3P48380 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
RFX3P48380 SNORA4.3-201ENST00000365564 137 ntBASIC1.94□□□□□ -2.1
RFX3P48380 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
RFX3P48380 SNORA67.3-201ENST00000384366 140 ntBASIC1.94□□□□□ -2.1
RFX3P48380 SNORA64-201ENST00000384674 134 ntBASIC1.94□□□□□ -2.1
RFX3P48380 MIR518D-201ENST00000385014 87 ntBASIC1.94□□□□□ -2.1
RFX3P48380 SNORA48.3-201ENST00000391081 134 ntBASIC1.94□□□□□ -2.1
RFX3P48380 AL023284.1-201ENST00000403956 276 ntBASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 114.5 ms