Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 AC110491.1-201ENST00000562191 2010 ntBASIC2.58□□□□□ -2
KRT3P12035 MIR6073-201ENST00000352083 89 ntBASIC2.58□□□□□ -2
KRT3P12035 Y_RNA.296-201ENST00000364930 108 ntBASIC2.58□□□□□ -2
KRT3P12035 RNU6-61P-201ENST00000365528 109 ntBASIC2.58□□□□□ -2
KRT3P12035 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC2.58□□□□□ -2
KRT3P12035 Y_RNA.534-201ENST00000384599 112 ntBASIC2.58□□□□□ -2
KRT3P12035 FGFR1OP2P1-201ENST00000395943 500 ntBASIC2.58□□□□□ -2
KRT3P12035 RNA5SP181-201ENST00000410246 98 ntBASIC2.58□□□□□ -2
KRT3P12035 CDK8P2-201ENST00000415020 547 ntBASIC2.58□□□□□ -2
KRT3P12035 MTND3P17-201ENST00000416968 344 ntBASIC2.58□□□□□ -2
KRT3P12035 HMGB1P9-201ENST00000429856 646 ntBASIC2.58□□□□□ -2
KRT3P12035 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC2.58□□□□□ -2
KRT3P12035 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.58□□□□□ -2
KRT3P12035 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC2.58□□□□□ -2
KRT3P12035 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2.58□□□□□ -2
KRT3P12035 RPS29P15-201ENST00000458329 171 ntBASIC2.58□□□□□ -2
KRT3P12035 AP001486.1-201ENST00000463339 476 ntBASIC2.58□□□□□ -2
KRT3P12035 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC2.58□□□□□ -2
KRT3P12035 AL157871.3-201ENST00000557231 293 ntBASIC2.58□□□□□ -2
KRT3P12035 AC021739.1-201ENST00000559631 174 ntBASIC2.58□□□□□ -2
KRT3P12035 MIR1273C-201ENST00000578669 77 ntBASIC2.58□□□□□ -2
KRT3P12035 MIR4658-201ENST00000584344 65 ntBASIC2.58□□□□□ -2
KRT3P12035 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
KRT3P12035 AL589743.7-201ENST00000612637 233 ntBASIC2.58□□□□□ -2
KRT3P12035 AC005332.10-201ENST00000612725 619 ntBASIC2.58□□□□□ -2
KRT3P12035 MIR6817-201ENST00000615588 66 ntBASIC2.58□□□□□ -2
KRT3P12035 AC048344.4-201ENST00000619744 527 ntBASIC2.58□□□□□ -2
KRT3P12035 AC093648.1-201ENST00000623546 606 ntBASIC2.58□□□□□ -2
KRT3P12035 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.58□□□□□ -2
KRT3P12035 U2.21-201ENST00000637295 81 ntBASIC2.58□□□□□ -2
KRT3P12035 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
KRT3P12035 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
KRT3P12035 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.57□□□□□ -2
KRT3P12035 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC2.57□□□□□ -2
KRT3P12035 Y_RNA.367-201ENST00000365544 101 ntBASIC2.57□□□□□ -2
KRT3P12035 RNU6-898P-201ENST00000365627 104 ntBASIC2.57□□□□□ -2
KRT3P12035 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
KRT3P12035 RNU6-1179P-201ENST00000384667 107 ntBASIC2.57□□□□□ -2
KRT3P12035 SNORA41-201ENST00000384675 132 ntBASIC2.57□□□□□ -2
KRT3P12035 Y_RNA.576-201ENST00000384781 102 ntBASIC2.57□□□□□ -2
KRT3P12035 MIR518C-201ENST00000384822 101 ntBASIC2.57□□□□□ -2
KRT3P12035 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC2.57□□□□□ -2
KRT3P12035 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC2.57□□□□□ -2
KRT3P12035 AL160275.3-201ENST00000423876 471 ntBASIC2.57□□□□□ -2
KRT3P12035 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.57□□□□□ -2
KRT3P12035 AL591704.1-201ENST00000432574 275 ntBASIC2.57□□□□□ -2
KRT3P12035 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC2.57□□□□□ -2
KRT3P12035 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.57□□□□□ -2
KRT3P12035 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.57□□□□□ -2
KRT3P12035 AC092001.1-201ENST00000453012 261 ntBASIC2.57□□□□□ -2
KRT3P12035 OFD1P4Y-201ENST00000455273 1179 ntBASIC2.57□□□□□ -2
KRT3P12035 RPS27P27-201ENST00000498779 255 ntBASIC2.57□□□□□ -2
KRT3P12035 LAMTOR3P2-201ENST00000504479 232 ntBASIC2.57□□□□□ -2
KRT3P12035 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC2.57□□□□□ -2
KRT3P12035 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.57□□□□□ -2
KRT3P12035 RNA5SP148-201ENST00000516527 94 ntBASIC2.57□□□□□ -2
KRT3P12035 SUB1P1-201ENST00000524415 382 ntBASIC2.57□□□□□ -2
KRT3P12035 AP003122.3-201ENST00000526316 255 ntBASIC2.57□□□□□ -2
KRT3P12035 AC084851.1-201ENST00000529105 249 ntBASIC2.57□□□□□ -2
KRT3P12035 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC2.57□□□□□ -2
KRT3P12035 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.57□□□□□ -2
KRT3P12035 AC106782.4-201ENST00000568264 210 ntBASIC2.57□□□□□ -2
KRT3P12035 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC2.57□□□□□ -2
KRT3P12035 MIR4446-201ENST00000578505 67 ntBASIC2.57□□□□□ -2
KRT3P12035 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC2.57□□□□□ -2
KRT3P12035 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.57□□□□□ -2
KRT3P12035 AC008521.1-201ENST00000587471 187 ntBASIC2.57□□□□□ -2
KRT3P12035 AC005261.5-201ENST00000596280 355 ntBASIC2.57□□□□□ -2
KRT3P12035 AC103591.3-201ENST00000608684 209 ntBASIC2.57□□□□□ -2
KRT3P12035 AC104237.2-201ENST00000612456 443 ntBASIC2.57□□□□□ -2
KRT3P12035 AC009090.3-201ENST00000616553 565 ntBASIC2.57□□□□□ -2
KRT3P12035 U6.42-201ENST00000618440 107 ntBASIC2.57□□□□□ -2
KRT3P12035 AC010889.1-201ENST00000566193 2666 ntBASIC2.57□□□□□ -2
KRT3P12035 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
KRT3P12035 AC093536.2-201ENST00000565257 1406 ntBASIC2.57□□□□□ -2
KRT3P12035 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
KRT3P12035 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
KRT3P12035 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.57□□□□□ -2
KRT3P12035 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.56□□□□□ -2
KRT3P12035 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
KRT3P12035 RNU6-1097P-201ENST00000363586 107 ntBASIC2.56□□□□□ -2
KRT3P12035 RNU6-1280P-201ENST00000365211 107 ntBASIC2.56□□□□□ -2
KRT3P12035 U8.8-201ENST00000365399 135 ntBASIC2.56□□□□□ -2
KRT3P12035 RNU6-395P-201ENST00000365662 106 ntBASIC2.56□□□□□ -2
KRT3P12035 AL359511.1-201ENST00000402970 211 ntBASIC2.56□□□□□ -2
KRT3P12035 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC2.56□□□□□ -2
KRT3P12035 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.56□□□□□ -2
KRT3P12035 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC2.56□□□□□ -2
KRT3P12035 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC2.56□□□□□ -2
KRT3P12035 AL161651.1-201ENST00000440882 223 ntBASIC2.56□□□□□ -2
KRT3P12035 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.56□□□□□ -2
KRT3P12035 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC2.56□□□□□ -2
KRT3P12035 BTF3P15-201ENST00000455606 336 ntBASIC2.56□□□□□ -2
KRT3P12035 AL583843.1-201ENST00000456070 346 ntBASIC2.56□□□□□ -2
KRT3P12035 RPS3P1-201ENST00000456781 192 ntBASIC2.56□□□□□ -2
KRT3P12035 AL122001.1-201ENST00000457027 370 ntBASIC2.56□□□□□ -2
KRT3P12035 RNU7-26P-201ENST00000458980 63 ntBASIC2.56□□□□□ -2
KRT3P12035 GZMAP1-201ENST00000503054 631 ntBASIC2.56□□□□□ -2
KRT3P12035 RNU4-29P-201ENST00000515943 174 ntBASIC2.56□□□□□ -2
KRT3P12035 SNORA31.18-201ENST00000517043 134 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 118.8 ms