Protein–RNA interactions for Protein: Q9NPD3

EXOSC4, Exosome complex component RRP41, humanhuman

Known RBP Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4Q9NPD3 AC017037.3-201ENST00000625016 472 ntBASIC1.78□□□□□ -2.12
EXOSC4Q9NPD3 AL512643.1-201ENST00000635735 524 ntBASIC1.78□□□□□ -2.12
EXOSC4Q9NPD3 AC004944.1-201ENST00000517807 3059 ntBASIC1.78□□□□□ -2.12
EXOSC4Q9NPD3 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC1.78□□□□□ -2.12
EXOSC4Q9NPD3 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC1.77□□□□□ -2.13
EXOSC4Q9NPD3 KPNA2P1-201ENST00000458289 1591 ntBASIC1.77□□□□□ -2.13
EXOSC4Q9NPD3 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC1.77□□□□□ -2.13
EXOSC4Q9NPD3 IL33-202ENST00000417746 2327 ntTSL 2 BASIC1.77□□□□□ -2.13
EXOSC4Q9NPD3 RNU6-501P-201ENST00000364072 100 ntBASIC1.77□□□□□ -2.13
EXOSC4Q9NPD3 RNU5E-6P-201ENST00000365574 115 ntBASIC1.77□□□□□ -2.13
EXOSC4Q9NPD3 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC1.77□□□□□ -2.13
EXOSC4Q9NPD3 Z98749.2-208ENST00000381646 500 ntBASIC1.77□□□□□ -2.13
EXOSC4Q9NPD3 UBE2V1P2-201ENST00000397758 440 ntBASIC1.77□□□□□ -2.13
EXOSC4Q9NPD3 AL445529.1-201ENST00000398713 389 ntBASIC1.77□□□□□ -2.13
EXOSC4Q9NPD3 OR51A5P-201ENST00000415429 942 ntBASIC1.77□□□□□ -2.13
EXOSC4Q9NPD3 AL135786.1-201ENST00000415892 214 ntBASIC1.77□□□□□ -2.13
EXOSC4Q9NPD3 HIGD1AP15-201ENST00000416198 280 ntBASIC1.77□□□□□ -2.13
EXOSC4Q9NPD3 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC1.77□□□□□ -2.13
EXOSC4Q9NPD3 XKRYP1-201ENST00000423438 492 ntBASIC1.77□□□□□ -2.13
EXOSC4Q9NPD3 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC1.77□□□□□ -2.13
EXOSC4Q9NPD3 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC1.77□□□□□ -2.13
EXOSC4Q9NPD3 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC1.77□□□□□ -2.13
EXOSC4Q9NPD3 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC1.77□□□□□ -2.13
EXOSC4Q9NPD3 XKRYP2-201ENST00000432915 492 ntBASIC1.77□□□□□ -2.13
EXOSC4Q9NPD3 FABP5P14-201ENST00000437273 393 ntBASIC1.77□□□□□ -2.13
EXOSC4Q9NPD3 AC004383.1-201ENST00000438135 289 ntBASIC1.77□□□□□ -2.13
EXOSC4Q9NPD3 AC016691.1-201ENST00000441321 413 ntBASIC1.77□□□□□ -2.13
EXOSC4Q9NPD3 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.77□□□□□ -2.13
EXOSC4Q9NPD3 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC1.77□□□□□ -2.13
EXOSC4Q9NPD3 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC1.77□□□□□ -2.13
EXOSC4Q9NPD3 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.77□□□□□ -2.13
EXOSC4Q9NPD3 AL590365.1-201ENST00000450788 243 ntBASIC1.77□□□□□ -2.13
EXOSC4Q9NPD3 AC092001.1-201ENST00000453012 261 ntBASIC1.77□□□□□ -2.13
EXOSC4Q9NPD3 AC093899.1-201ENST00000457984 376 ntBASIC1.77□□□□□ -2.13
EXOSC4Q9NPD3 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC1.77□□□□□ -2.13
EXOSC4Q9NPD3 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC1.77□□□□□ -2.13
EXOSC4Q9NPD3 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC1.77□□□□□ -2.13
EXOSC4Q9NPD3 SNORA25.11-201ENST00000515935 105 ntBASIC1.77□□□□□ -2.13
EXOSC4Q9NPD3 SNORA3.4-201ENST00000515969 96 ntBASIC1.77□□□□□ -2.13
EXOSC4Q9NPD3 SNORD19.2-201ENST00000516978 73 ntBASIC1.77□□□□□ -2.13
EXOSC4Q9NPD3 RNU2-19P-201ENST00000517288 84 ntBASIC1.77□□□□□ -2.13
EXOSC4Q9NPD3 AC009902.1-201ENST00000519351 183 ntBASIC1.77□□□□□ -2.13
EXOSC4Q9NPD3 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.77□□□□□ -2.13
EXOSC4Q9NPD3 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC1.77□□□□□ -2.13
EXOSC4Q9NPD3 MRPS36P5-201ENST00000551909 298 ntBASIC1.77□□□□□ -2.13
EXOSC4Q9NPD3 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC1.77□□□□□ -2.13
EXOSC4Q9NPD3 ROCK1P1-201ENST00000573767 549 ntBASIC1.77□□□□□ -2.13
EXOSC4Q9NPD3 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC1.77□□□□□ -2.13
EXOSC4Q9NPD3 MIR5697-201ENST00000578045 78 ntBASIC1.77□□□□□ -2.13
EXOSC4Q9NPD3 AL353778.1-201ENST00000603149 408 ntBASIC1.77□□□□□ -2.13
EXOSC4Q9NPD3 AC104763.2-201ENST00000604179 382 ntBASIC1.77□□□□□ -2.13
EXOSC4Q9NPD3 AC009233.1-201ENST00000616477 371 ntBASIC1.77□□□□□ -2.13
EXOSC4Q9NPD3 CENPCP1-201ENST00000533085 2578 ntBASIC1.77□□□□□ -2.13
EXOSC4Q9NPD3 MTND5P6-201ENST00000422338 1798 ntBASIC1.77□□□□□ -2.13
EXOSC4Q9NPD3 MTND5P30-201ENST00000452896 1731 ntBASIC1.77□□□□□ -2.13
EXOSC4Q9NPD3 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
EXOSC4Q9NPD3 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.76□□□□□ -2.13
EXOSC4Q9NPD3 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
EXOSC4Q9NPD3 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
EXOSC4Q9NPD3 RNU6-500P-201ENST00000362349 107 ntBASIC1.76□□□□□ -2.13
EXOSC4Q9NPD3 RNU4-82P-201ENST00000362443 140 ntBASIC1.76□□□□□ -2.13
EXOSC4Q9NPD3 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
EXOSC4Q9NPD3 RNA5SP270-201ENST00000411361 118 ntBASIC1.76□□□□□ -2.13
EXOSC4Q9NPD3 AC007283.2-201ENST00000424739 197 ntBASIC1.76□□□□□ -2.13
EXOSC4Q9NPD3 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC1.76□□□□□ -2.13
EXOSC4Q9NPD3 AL356320.1-201ENST00000429616 163 ntBASIC1.76□□□□□ -2.13
EXOSC4Q9NPD3 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC1.76□□□□□ -2.13
EXOSC4Q9NPD3 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.76□□□□□ -2.13
EXOSC4Q9NPD3 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC1.76□□□□□ -2.13
EXOSC4Q9NPD3 AL139824.2-201ENST00000458731 1095 ntBASIC1.76□□□□□ -2.13
EXOSC4Q9NPD3 SNORD97-201ENST00000459187 142 ntBASIC1.76□□□□□ -2.13
EXOSC4Q9NPD3 AP001324.2-201ENST00000461163 319 ntBASIC1.76□□□□□ -2.13
EXOSC4Q9NPD3 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC1.76□□□□□ -2.13
EXOSC4Q9NPD3 RNU6-143P-201ENST00000516942 93 ntBASIC1.76□□□□□ -2.13
EXOSC4Q9NPD3 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC1.76□□□□□ -2.13
EXOSC4Q9NPD3 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC1.76□□□□□ -2.13
EXOSC4Q9NPD3 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC1.76□□□□□ -2.13
EXOSC4Q9NPD3 PCMTD1P2-201ENST00000565017 355 ntBASIC1.76□□□□□ -2.13
EXOSC4Q9NPD3 NRBF2P1-201ENST00000587407 859 ntBASIC1.76□□□□□ -2.13
EXOSC4Q9NPD3 AC022022.2-201ENST00000602989 360 ntBASIC1.76□□□□□ -2.13
EXOSC4Q9NPD3 AL670379.6-201ENST00000603753 252 ntBASIC1.76□□□□□ -2.13
EXOSC4Q9NPD3 AL670379.11-201ENST00000604059 253 ntBASIC1.76□□□□□ -2.13
EXOSC4Q9NPD3 AL355598.1-201ENST00000604169 202 ntBASIC1.76□□□□□ -2.13
EXOSC4Q9NPD3 AC008162.1-201ENST00000604718 254 ntBASIC1.76□□□□□ -2.13
EXOSC4Q9NPD3 AL670379.1-201ENST00000604752 252 ntBASIC1.76□□□□□ -2.13
EXOSC4Q9NPD3 AL670379.5-201ENST00000605253 252 ntBASIC1.76□□□□□ -2.13
EXOSC4Q9NPD3 AL670379.12-201ENST00000605291 253 ntBASIC1.76□□□□□ -2.13
EXOSC4Q9NPD3 AL670379.8-201ENST00000605353 252 ntBASIC1.76□□□□□ -2.13
EXOSC4Q9NPD3 AL670379.7-201ENST00000605823 252 ntBASIC1.76□□□□□ -2.13
EXOSC4Q9NPD3 AC022893.3-201ENST00000607665 437 ntBASIC1.76□□□□□ -2.13
EXOSC4Q9NPD3 MTND5P42-201ENST00000637720 498 ntBASIC1.76□□□□□ -2.13
EXOSC4Q9NPD3 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC1.76□□□□□ -2.13
EXOSC4Q9NPD3 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
EXOSC4Q9NPD3 RNU6-946P-201ENST00000383878 107 ntBASIC1.75□□□□□ -2.13
EXOSC4Q9NPD3 EIF1AXP1-201ENST00000419267 435 ntBASIC1.75□□□□□ -2.13
EXOSC4Q9NPD3 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC1.75□□□□□ -2.13
EXOSC4Q9NPD3 HMGN2P19-201ENST00000425149 265 ntBASIC1.75□□□□□ -2.13
EXOSC4Q9NPD3 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.75□□□□□ -2.13
EXOSC4Q9NPD3 AL591212.2-201ENST00000433923 257 ntBASIC1.75□□□□□ -2.13
EXOSC4Q9NPD3 UBE2D3P1-201ENST00000436669 444 ntBASIC1.75□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 144.3 ms