Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC0.79□□□□□ -2.28
LIMD2Q9BT23 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC0.79□□□□□ -2.28
LIMD2Q9BT23 RNA5SP445-201ENST00000515889 115 ntBASIC0.79□□□□□ -2.28
LIMD2Q9BT23 RNU6-581P-201ENST00000516214 105 ntBASIC0.79□□□□□ -2.28
LIMD2Q9BT23 5S_rRNA.3-201ENST00000517021 110 ntBASIC0.79□□□□□ -2.28
LIMD2Q9BT23 RNU6-902P-201ENST00000517212 91 ntBASIC0.79□□□□□ -2.28
LIMD2Q9BT23 ADAM3B-201ENST00000569937 840 ntBASIC0.79□□□□□ -2.28
LIMD2Q9BT23 5S_rRNA.19-201ENST00000612131 110 ntBASIC0.79□□□□□ -2.28
LIMD2Q9BT23 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
LIMD2Q9BT23 AC005332.6-201ENST00000613178 446 ntBASIC0.79□□□□□ -2.28
LIMD2Q9BT23 AL132822.1-201ENST00000617063 513 ntBASIC0.79□□□□□ -2.28
LIMD2Q9BT23 5S_rRNA.18-201ENST00000621941 110 ntBASIC0.79□□□□□ -2.28
LIMD2Q9BT23 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC0.79□□□□□ -2.28
LIMD2Q9BT23 ATM-228ENST00000639240 498 ntTSL 5 BASIC0.79□□□□□ -2.28
LIMD2Q9BT23 ATM-230ENST00000640388 578 ntTSL 5 BASIC0.79□□□□□ -2.28
LIMD2Q9BT23 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
LIMD2Q9BT23 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC0.79□□□□□ -2.28
LIMD2Q9BT23 AP000560.1-201ENST00000624150 1937 ntBASIC0.78□□□□□ -2.28
LIMD2Q9BT23 AC138393.1-203ENST00000327086 343 ntBASIC0.78□□□□□ -2.28
LIMD2Q9BT23 RNU1-58P-201ENST00000362413 163 ntBASIC0.78□□□□□ -2.28
LIMD2Q9BT23 RNU6-188P-201ENST00000364207 107 ntBASIC0.78□□□□□ -2.28
LIMD2Q9BT23 RNU6-343P-201ENST00000364709 104 ntBASIC0.78□□□□□ -2.28
LIMD2Q9BT23 RNU6-650P-201ENST00000365658 111 ntBASIC0.78□□□□□ -2.28
LIMD2Q9BT23 SNORA22-201ENST00000383907 134 ntBASIC0.78□□□□□ -2.28
LIMD2Q9BT23 SNORA22C-201ENST00000384614 134 ntBASIC0.78□□□□□ -2.28
LIMD2Q9BT23 MIR518D-201ENST00000385014 87 ntBASIC0.78□□□□□ -2.28
LIMD2Q9BT23 SNORA48.1-201ENST00000390879 135 ntBASIC0.78□□□□□ -2.28
LIMD2Q9BT23 RNU11-3P-201ENST00000391111 133 ntBASIC0.78□□□□□ -2.28
LIMD2Q9BT23 AL021407.1-201ENST00000404531 386 ntBASIC0.78□□□□□ -2.28
LIMD2Q9BT23 RNU6-174P-201ENST00000410406 106 ntBASIC0.78□□□□□ -2.28
LIMD2Q9BT23 AL022400.1-201ENST00000423946 935 ntBASIC0.78□□□□□ -2.28
LIMD2Q9BT23 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC0.78□□□□□ -2.28
LIMD2Q9BT23 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC0.78□□□□□ -2.28
LIMD2Q9BT23 GTF2IP3-201ENST00000433887 494 ntBASIC0.78□□□□□ -2.28
LIMD2Q9BT23 ZFAND6P1-201ENST00000434138 605 ntBASIC0.78□□□□□ -2.28
LIMD2Q9BT23 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC0.78□□□□□ -2.28
LIMD2Q9BT23 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC0.78□□□□□ -2.28
LIMD2Q9BT23 AKIRIN2P1-201ENST00000505898 352 ntBASIC0.78□□□□□ -2.28
LIMD2Q9BT23 AC010468.3-201ENST00000508225 458 ntBASIC0.78□□□□□ -2.28
LIMD2Q9BT23 SNORA25.11-201ENST00000515935 105 ntBASIC0.78□□□□□ -2.28
LIMD2Q9BT23 RNU6-1183P-201ENST00000517054 60 ntBASIC0.78□□□□□ -2.28
LIMD2Q9BT23 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC0.78□□□□□ -2.28
LIMD2Q9BT23 AC044913.1-201ENST00000557200 430 ntBASIC0.78□□□□□ -2.28
LIMD2Q9BT23 AC019288.1-201ENST00000557918 224 ntBASIC0.78□□□□□ -2.28
LIMD2Q9BT23 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC0.78□□□□□ -2.28
LIMD2Q9BT23 AC005668.1-201ENST00000571142 476 ntBASIC0.78□□□□□ -2.28
LIMD2Q9BT23 MIR4789-201ENST00000577469 82 ntBASIC0.78□□□□□ -2.28
LIMD2Q9BT23 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC0.78□□□□□ -2.28
LIMD2Q9BT23 AP001542.2-201ENST00000593141 364 ntBASIC0.78□□□□□ -2.28
LIMD2Q9BT23 ZNF92P2-201ENST00000600543 1059 ntBASIC0.78□□□□□ -2.28
LIMD2Q9BT23 AC073544.2-201ENST00000601155 540 ntBASIC0.78□□□□□ -2.28
LIMD2Q9BT23 AC034229.4-201ENST00000607861 441 ntBASIC0.78□□□□□ -2.28
LIMD2Q9BT23 AC243773.3-201ENST00000613270 256 ntBASIC0.78□□□□□ -2.28
LIMD2Q9BT23 MIR8074-201ENST00000615081 81 ntBASIC0.78□□□□□ -2.28
LIMD2Q9BT23 SLC10A5P1-201ENST00000379063 1306 ntBASIC0.78□□□□□ -2.28
LIMD2Q9BT23 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
LIMD2Q9BT23 PCF11-AS1-201ENST00000602322 1516 ntBASIC0.78□□□□□ -2.28
LIMD2Q9BT23 ZNF72P-201ENST00000425869 1908 ntBASIC0.77□□□□□ -2.29
LIMD2Q9BT23 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC0.77□□□□□ -2.29
LIMD2Q9BT23 CBX3P1-201ENST00000325243 554 ntBASIC0.77□□□□□ -2.29
LIMD2Q9BT23 U6.112-201ENST00000384129 70 ntBASIC0.77□□□□□ -2.29
LIMD2Q9BT23 MIR618-201ENST00000385287 98 ntBASIC0.77□□□□□ -2.29
LIMD2Q9BT23 SRIP3-201ENST00000413200 219 ntBASIC0.77□□□□□ -2.29
LIMD2Q9BT23 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC0.77□□□□□ -2.29
LIMD2Q9BT23 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC0.77□□□□□ -2.29
LIMD2Q9BT23 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC0.77□□□□□ -2.29
LIMD2Q9BT23 MTND4P6-201ENST00000438297 472 ntBASIC0.77□□□□□ -2.29
LIMD2Q9BT23 AC079448.1-201ENST00000449377 373 ntBASIC0.77□□□□□ -2.29
LIMD2Q9BT23 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC0.77□□□□□ -2.29
LIMD2Q9BT23 FDX1P2-201ENST00000450769 375 ntBASIC0.77□□□□□ -2.29
LIMD2Q9BT23 OR6C5P-201ENST00000452388 923 ntBASIC0.77□□□□□ -2.29
LIMD2Q9BT23 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC0.77□□□□□ -2.29
LIMD2Q9BT23 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC0.77□□□□□ -2.29
LIMD2Q9BT23 AC139453.3-201ENST00000493276 369 ntBASIC0.77□□□□□ -2.29
LIMD2Q9BT23 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC0.77□□□□□ -2.29
LIMD2Q9BT23 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC0.77□□□□□ -2.29
LIMD2Q9BT23 AC117532.1-201ENST00000514638 323 ntBASIC0.77□□□□□ -2.29
LIMD2Q9BT23 RNU6-1102P-201ENST00000516149 96 ntBASIC0.77□□□□□ -2.29
LIMD2Q9BT23 RN7SKP258-201ENST00000517151 304 ntBASIC0.77□□□□□ -2.29
LIMD2Q9BT23 RNU6-586P-201ENST00000517265 104 ntBASIC0.77□□□□□ -2.29
LIMD2Q9BT23 AC109329.1-201ENST00000518744 317 ntBASIC0.77□□□□□ -2.29
LIMD2Q9BT23 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC0.77□□□□□ -2.29
LIMD2Q9BT23 MIR4295-201ENST00000585286 85 ntBASIC0.77□□□□□ -2.29
LIMD2Q9BT23 AF038458.1-201ENST00000588406 262 ntBASIC0.77□□□□□ -2.29
LIMD2Q9BT23 CYP2C61P-201ENST00000604072 290 ntBASIC0.77□□□□□ -2.29
LIMD2Q9BT23 AC098614.4-201ENST00000607601 462 ntBASIC0.77□□□□□ -2.29
LIMD2Q9BT23 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC0.76□□□□□ -2.29
LIMD2Q9BT23 RBBP8P1-201ENST00000449447 1844 ntBASIC0.76□□□□□ -2.29
LIMD2Q9BT23 TEX21P-201ENST00000447107 1476 ntBASIC0.76□□□□□ -2.29
LIMD2Q9BT23 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
LIMD2Q9BT23 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC0.76□□□□□ -2.29
LIMD2Q9BT23 AL161781.1-201ENST00000354277 403 ntBASIC0.76□□□□□ -2.29
LIMD2Q9BT23 UBE2Q2P1-202ENST00000354771 883 ntBASIC0.76□□□□□ -2.29
LIMD2Q9BT23 RNU6-97P-201ENST00000363387 104 ntBASIC0.76□□□□□ -2.29
LIMD2Q9BT23 RNU4-51P-201ENST00000364206 140 ntBASIC0.76□□□□□ -2.29
LIMD2Q9BT23 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
LIMD2Q9BT23 SNORD14D-201ENST00000384390 87 ntBASIC0.76□□□□□ -2.29
LIMD2Q9BT23 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC0.76□□□□□ -2.29
LIMD2Q9BT23 OR51A5P-201ENST00000415429 942 ntBASIC0.76□□□□□ -2.29
LIMD2Q9BT23 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC0.76□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms