Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC2.94□□□□□ -1.94
SLC44A1Q8WWI5 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC2.94□□□□□ -1.94
SLC44A1Q8WWI5 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.94□□□□□ -1.94
SLC44A1Q8WWI5 AC068135.2-201ENST00000569293 1028 ntBASIC2.94□□□□□ -1.94
SLC44A1Q8WWI5 MIR1273C-201ENST00000578669 77 ntBASIC2.94□□□□□ -1.94
SLC44A1Q8WWI5 MIR3609-201ENST00000582661 80 ntBASIC2.94□□□□□ -1.94
SLC44A1Q8WWI5 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.94□□□□□ -1.94
SLC44A1Q8WWI5 NRBF2P5-201ENST00000603087 788 ntBASIC2.94□□□□□ -1.94
SLC44A1Q8WWI5 AP000907.4-201ENST00000604143 237 ntBASIC2.94□□□□□ -1.94
SLC44A1Q8WWI5 AL160281.1-201ENST00000605307 311 ntBASIC2.94□□□□□ -1.94
SLC44A1Q8WWI5 AC005000.2-201ENST00000605468 310 ntBASIC2.94□□□□□ -1.94
SLC44A1Q8WWI5 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC2.94□□□□□ -1.94
SLC44A1Q8WWI5 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.94□□□□□ -1.94
SLC44A1Q8WWI5 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.94□□□□□ -1.94
SLC44A1Q8WWI5 AL512643.1-201ENST00000635735 524 ntBASIC2.94□□□□□ -1.94
SLC44A1Q8WWI5 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
SLC44A1Q8WWI5 HSPA8P4-201ENST00000511877 1920 ntBASIC2.93□□□□□ -1.94
SLC44A1Q8WWI5 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.93□□□□□ -1.94
SLC44A1Q8WWI5 MTND4P14-201ENST00000435799 1354 ntBASIC2.93□□□□□ -1.94
SLC44A1Q8WWI5 FTLP6-201ENST00000355274 422 ntBASIC2.93□□□□□ -1.94
SLC44A1Q8WWI5 RNA5SP374-201ENST00000362939 125 ntBASIC2.93□□□□□ -1.94
SLC44A1Q8WWI5 SNORA14A-201ENST00000364773 135 ntBASIC2.93□□□□□ -1.94
SLC44A1Q8WWI5 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.93□□□□□ -1.94
SLC44A1Q8WWI5 SNORA4.3-201ENST00000365564 137 ntBASIC2.93□□□□□ -1.94
SLC44A1Q8WWI5 RNU6-116P-201ENST00000384042 109 ntBASIC2.93□□□□□ -1.94
SLC44A1Q8WWI5 MIR128-1-201ENST00000384921 82 ntBASIC2.93□□□□□ -1.94
SLC44A1Q8WWI5 MIR514A2-201ENST00000385131 88 ntBASIC2.93□□□□□ -1.94
SLC44A1Q8WWI5 MIR514A3-201ENST00000385132 88 ntBASIC2.93□□□□□ -1.94
SLC44A1Q8WWI5 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
SLC44A1Q8WWI5 RN7SKP220-201ENST00000410611 288 ntBASIC2.93□□□□□ -1.94
SLC44A1Q8WWI5 RNU6-1068P-201ENST00000410958 103 ntBASIC2.93□□□□□ -1.94
SLC44A1Q8WWI5 RNA5SP111-201ENST00000411386 101 ntBASIC2.93□□□□□ -1.94
SLC44A1Q8WWI5 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.93□□□□□ -1.94
SLC44A1Q8WWI5 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.93□□□□□ -1.94
SLC44A1Q8WWI5 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC2.93□□□□□ -1.94
SLC44A1Q8WWI5 SNRPEP9-201ENST00000436794 238 ntBASIC2.93□□□□□ -1.94
SLC44A1Q8WWI5 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.93□□□□□ -1.94
SLC44A1Q8WWI5 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC2.93□□□□□ -1.94
SLC44A1Q8WWI5 CECR9-201ENST00000453421 199 ntBASIC2.93□□□□□ -1.94
SLC44A1Q8WWI5 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC2.93□□□□□ -1.94
SLC44A1Q8WWI5 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC2.93□□□□□ -1.94
SLC44A1Q8WWI5 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC2.93□□□□□ -1.94
SLC44A1Q8WWI5 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC2.93□□□□□ -1.94
SLC44A1Q8WWI5 AC091885.1-201ENST00000506658 268 ntBASIC2.93□□□□□ -1.94
SLC44A1Q8WWI5 AL157871.3-201ENST00000557231 293 ntBASIC2.93□□□□□ -1.94
SLC44A1Q8WWI5 AC234778.2-201ENST00000566241 354 ntBASIC2.93□□□□□ -1.94
SLC44A1Q8WWI5 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.93□□□□□ -1.94
SLC44A1Q8WWI5 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.93□□□□□ -1.94
SLC44A1Q8WWI5 AL670379.4-201ENST00000605279 254 ntBASIC2.93□□□□□ -1.94
SLC44A1Q8WWI5 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
SLC44A1Q8WWI5 FTX_3.1-201ENST00000610451 147 ntBASIC2.93□□□□□ -1.94
SLC44A1Q8WWI5 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.93□□□□□ -1.94
SLC44A1Q8WWI5 MIR6733-201ENST00000635723 61 ntBASIC2.93□□□□□ -1.94
SLC44A1Q8WWI5 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
SLC44A1Q8WWI5 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
SLC44A1Q8WWI5 RNU6-1127P-201ENST00000384580 107 ntBASIC2.92□□□□□ -1.94
SLC44A1Q8WWI5 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
SLC44A1Q8WWI5 AL592114.1-201ENST00000403842 483 ntBASIC2.92□□□□□ -1.94
SLC44A1Q8WWI5 AL606923.1-201ENST00000406616 190 ntBASIC2.92□□□□□ -1.94
SLC44A1Q8WWI5 RNU2-68P-201ENST00000410878 191 ntBASIC2.92□□□□□ -1.94
SLC44A1Q8WWI5 Z92545.1-201ENST00000411782 234 ntBASIC2.92□□□□□ -1.94
SLC44A1Q8WWI5 OR9R1P-201ENST00000412200 877 ntBASIC2.92□□□□□ -1.94
SLC44A1Q8WWI5 MTND1P23-201ENST00000416931 372 ntBASIC2.92□□□□□ -1.94
SLC44A1Q8WWI5 SRIP2-201ENST00000428470 166 ntBASIC2.92□□□□□ -1.94
SLC44A1Q8WWI5 RPL36AP53-201ENST00000432891 316 ntBASIC2.92□□□□□ -1.94
SLC44A1Q8WWI5 IGKV1OR-3-201ENST00000446944 348 ntBASIC2.92□□□□□ -1.94
SLC44A1Q8WWI5 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC2.92□□□□□ -1.94
SLC44A1Q8WWI5 RPL31P58-201ENST00000469001 379 ntBASIC2.92□□□□□ -1.94
SLC44A1Q8WWI5 AC104472.2-201ENST00000469035 601 ntBASIC2.92□□□□□ -1.94
SLC44A1Q8WWI5 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC2.92□□□□□ -1.94
SLC44A1Q8WWI5 MTCO3P9-201ENST00000506989 781 ntBASIC2.92□□□□□ -1.94
SLC44A1Q8WWI5 LRRC34P2-201ENST00000514850 553 ntBASIC2.92□□□□□ -1.94
SLC44A1Q8WWI5 RNA5SP165-201ENST00000517142 115 ntBASIC2.92□□□□□ -1.94
SLC44A1Q8WWI5 AL133241.1-201ENST00000556832 487 ntBASIC2.92□□□□□ -1.94
SLC44A1Q8WWI5 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC2.92□□□□□ -1.94
SLC44A1Q8WWI5 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.92□□□□□ -1.94
SLC44A1Q8WWI5 MIR548AC-201ENST00000585049 88 ntBASIC2.92□□□□□ -1.94
SLC44A1Q8WWI5 AC004805.2-201ENST00000605382 482 ntBASIC2.92□□□□□ -1.94
SLC44A1Q8WWI5 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
SLC44A1Q8WWI5 RMST_3.1-201ENST00000611651 109 ntBASIC2.92□□□□□ -1.94
SLC44A1Q8WWI5 DUSP12P1-201ENST00000612874 516 ntBASIC2.92□□□□□ -1.94
SLC44A1Q8WWI5 uc_338.34-201ENST00000617467 174 ntBASIC2.92□□□□□ -1.94
SLC44A1Q8WWI5 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.92□□□□□ -1.94
SLC44A1Q8WWI5 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.92□□□□□ -1.94
SLC44A1Q8WWI5 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
SLC44A1Q8WWI5 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC2.91□□□□□ -1.94
SLC44A1Q8WWI5 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.91□□□□□ -1.94
SLC44A1Q8WWI5 OR4G1P-203ENST00000641984 1631 ntBASIC2.91□□□□□ -1.94
SLC44A1Q8WWI5 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.91□□□□□ -1.94
SLC44A1Q8WWI5 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.91□□□□□ -1.94
SLC44A1Q8WWI5 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
SLC44A1Q8WWI5 RNU6-270P-201ENST00000364131 105 ntBASIC2.91□□□□□ -1.94
SLC44A1Q8WWI5 RNU6-395P-201ENST00000365662 106 ntBASIC2.91□□□□□ -1.94
SLC44A1Q8WWI5 CD24P4-201ENST00000382840 243 ntBASIC2.91□□□□□ -1.94
SLC44A1Q8WWI5 MIR512-1-201ENST00000384913 84 ntBASIC2.91□□□□□ -1.94
SLC44A1Q8WWI5 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
SLC44A1Q8WWI5 FGF7P8-201ENST00000402994 292 ntBASIC2.91□□□□□ -1.94
SLC44A1Q8WWI5 RNU6-373P-201ENST00000411247 98 ntBASIC2.91□□□□□ -1.94
SLC44A1Q8WWI5 USP9YP6-201ENST00000413550 854 ntBASIC2.91□□□□□ -1.94
SLC44A1Q8WWI5 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 121.5 ms