Protein–RNA interactions for Protein: Q8N4P3

HDDC3, Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase MESH1, humanhuman

Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3Q8N4P3 AL353706.1-201ENST00000436728 494 ntBASIC2.42□□□□□ -2.02
HDDC3Q8N4P3 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.42□□□□□ -2.02
HDDC3Q8N4P3 AC096638.1-201ENST00000444678 216 ntBASIC2.42□□□□□ -2.02
HDDC3Q8N4P3 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC2.42□□□□□ -2.02
HDDC3Q8N4P3 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.42□□□□□ -2.02
HDDC3Q8N4P3 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.42□□□□□ -2.02
HDDC3Q8N4P3 AC018437.1-201ENST00000492214 406 ntBASIC2.42□□□□□ -2.02
HDDC3Q8N4P3 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.42□□□□□ -2.02
HDDC3Q8N4P3 FAM92A1P2-202ENST00000504766 877 ntBASIC2.42□□□□□ -2.02
HDDC3Q8N4P3 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC2.42□□□□□ -2.02
HDDC3Q8N4P3 AF213884.2-201ENST00000510417 903 ntBASIC2.42□□□□□ -2.02
HDDC3Q8N4P3 AC026436.1-201ENST00000510537 270 ntBASIC2.42□□□□□ -2.02
HDDC3Q8N4P3 RNA5SP281-201ENST00000516504 135 ntBASIC2.42□□□□□ -2.02
HDDC3Q8N4P3 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.42□□□□□ -2.02
HDDC3Q8N4P3 AL138976.2-201ENST00000563989 694 ntBASIC2.42□□□□□ -2.02
HDDC3Q8N4P3 AC009127.3-201ENST00000570531 403 ntBASIC2.42□□□□□ -2.02
HDDC3Q8N4P3 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC2.42□□□□□ -2.02
HDDC3Q8N4P3 RPS15AP11-201ENST00000594193 385 ntBASIC2.42□□□□□ -2.02
HDDC3Q8N4P3 AL670379.10-201ENST00000604330 253 ntBASIC2.42□□□□□ -2.02
HDDC3Q8N4P3 AL670379.9-201ENST00000605428 253 ntBASIC2.42□□□□□ -2.02
HDDC3Q8N4P3 MIR15A-201ENST00000607334 83 ntBASIC2.42□□□□□ -2.02
HDDC3Q8N4P3 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
HDDC3Q8N4P3 AC110994.2-201ENST00000635481 492 ntBASIC2.42□□□□□ -2.02
HDDC3Q8N4P3 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
HDDC3Q8N4P3 AC002543.1-201ENST00000299783 1954 ntBASIC2.41□□□□□ -2.02
HDDC3Q8N4P3 AC069528.2-201ENST00000624849 1991 ntBASIC2.41□□□□□ -2.02
HDDC3Q8N4P3 MIR764-201ENST00000390811 85 ntBASIC2.41□□□□□ -2.02
HDDC3Q8N4P3 SNORD115.1-201ENST00000391109 76 ntBASIC2.41□□□□□ -2.02
HDDC3Q8N4P3 AL133475.1-201ENST00000404414 305 ntBASIC2.41□□□□□ -2.02
HDDC3Q8N4P3 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC2.41□□□□□ -2.02
HDDC3Q8N4P3 AC137499.1-201ENST00000427602 88 ntBASIC2.41□□□□□ -2.02
HDDC3Q8N4P3 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.41□□□□□ -2.02
HDDC3Q8N4P3 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC2.41□□□□□ -2.02
HDDC3Q8N4P3 ZNF736P12Y-201ENST00000443152 1243 ntBASIC2.41□□□□□ -2.02
HDDC3Q8N4P3 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.41□□□□□ -2.02
HDDC3Q8N4P3 AC027673.1-201ENST00000456245 405 ntBASIC2.41□□□□□ -2.02
HDDC3Q8N4P3 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC2.41□□□□□ -2.02
HDDC3Q8N4P3 AC068781.1-201ENST00000488231 618 ntBASIC2.41□□□□□ -2.02
HDDC3Q8N4P3 RPS3AP22-201ENST00000488297 769 ntBASIC2.41□□□□□ -2.02
HDDC3Q8N4P3 AC140059.1-201ENST00000489238 361 ntBASIC2.41□□□□□ -2.02
HDDC3Q8N4P3 AC007182.2-201ENST00000489251 402 ntBASIC2.41□□□□□ -2.02
HDDC3Q8N4P3 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC2.41□□□□□ -2.02
HDDC3Q8N4P3 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.41□□□□□ -2.02
HDDC3Q8N4P3 RNA5SP337-201ENST00000517007 109 ntBASIC2.41□□□□□ -2.02
HDDC3Q8N4P3 AC025881.1-201ENST00000518851 512 ntBASIC2.41□□□□□ -2.02
HDDC3Q8N4P3 MRPS36P3-201ENST00000519284 130 ntBASIC2.41□□□□□ -2.02
HDDC3Q8N4P3 HMGB1P41-201ENST00000520234 440 ntBASIC2.41□□□□□ -2.02
HDDC3Q8N4P3 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC2.41□□□□□ -2.02
HDDC3Q8N4P3 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.41□□□□□ -2.02
HDDC3Q8N4P3 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.41□□□□□ -2.02
HDDC3Q8N4P3 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC2.41□□□□□ -2.02
HDDC3Q8N4P3 AC060766.3-201ENST00000591442 263 ntBASIC2.41□□□□□ -2.02
HDDC3Q8N4P3 AC234772.3-201ENST00000602277 528 ntBASIC2.41□□□□□ -2.02
HDDC3Q8N4P3 AC068276.1-201ENST00000605793 379 ntBASIC2.41□□□□□ -2.02
HDDC3Q8N4P3 MIR5739-201ENST00000619803 80 ntBASIC2.41□□□□□ -2.02
HDDC3Q8N4P3 AC138627.2-201ENST00000624202 601 ntBASIC2.41□□□□□ -2.02
HDDC3Q8N4P3 MIR1291-201ENST00000627649 87 ntBASIC2.41□□□□□ -2.02
HDDC3Q8N4P3 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.41□□□□□ -2.02
HDDC3Q8N4P3 HSPA8P4-201ENST00000511877 1920 ntBASIC2.4□□□□□ -2.02
HDDC3Q8N4P3 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
HDDC3Q8N4P3 AC073343.1-201ENST00000328239 651 ntBASIC2.4□□□□□ -2.03
HDDC3Q8N4P3 RNU6-858P-201ENST00000362436 107 ntBASIC2.4□□□□□ -2.03
HDDC3Q8N4P3 SNORD114-1-201ENST00000362705 72 ntBASIC2.4□□□□□ -2.03
HDDC3Q8N4P3 SNORD56.2-201ENST00000363242 71 ntBASIC2.4□□□□□ -2.03
HDDC3Q8N4P3 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC2.4□□□□□ -2.03
HDDC3Q8N4P3 DEFA7P-201ENST00000382676 285 ntBASIC2.4□□□□□ -2.03
HDDC3Q8N4P3 RNU6-166P-201ENST00000384371 107 ntBASIC2.4□□□□□ -2.03
HDDC3Q8N4P3 MTCYBP36-201ENST00000404146 440 ntBASIC2.4□□□□□ -2.03
HDDC3Q8N4P3 AL162578.1-201ENST00000406202 378 ntBASIC2.4□□□□□ -2.03
HDDC3Q8N4P3 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.4□□□□□ -2.03
HDDC3Q8N4P3 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC2.4□□□□□ -2.03
HDDC3Q8N4P3 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC2.4□□□□□ -2.03
HDDC3Q8N4P3 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.4□□□□□ -2.03
HDDC3Q8N4P3 AC098826.1-201ENST00000433943 471 ntBASIC2.4□□□□□ -2.03
HDDC3Q8N4P3 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.4□□□□□ -2.03
HDDC3Q8N4P3 AC012308.1-201ENST00000451232 178 ntBASIC2.4□□□□□ -2.03
HDDC3Q8N4P3 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC2.4□□□□□ -2.03
HDDC3Q8N4P3 AC073901.1-201ENST00000462471 408 ntBASIC2.4□□□□□ -2.03
HDDC3Q8N4P3 AC090515.1-201ENST00000465295 476 ntBASIC2.4□□□□□ -2.03
HDDC3Q8N4P3 MTND4P2-201ENST00000507767 1203 ntBASIC2.4□□□□□ -2.03
HDDC3Q8N4P3 AC008526.1-201ENST00000509149 338 ntBASIC2.4□□□□□ -2.03
HDDC3Q8N4P3 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.4□□□□□ -2.03
HDDC3Q8N4P3 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC2.4□□□□□ -2.03
HDDC3Q8N4P3 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC2.4□□□□□ -2.03
HDDC3Q8N4P3 RPS3AP23-202ENST00000574601 686 ntBASIC2.4□□□□□ -2.03
HDDC3Q8N4P3 AL355297.2-201ENST00000604792 129 ntBASIC2.4□□□□□ -2.03
HDDC3Q8N4P3 AL158032.1-201ENST00000605401 106 ntBASIC2.4□□□□□ -2.03
HDDC3Q8N4P3 AC103810.6-201ENST00000606708 136 ntBASIC2.4□□□□□ -2.03
HDDC3Q8N4P3 RNU6-87P-201ENST00000607561 108 ntBASIC2.4□□□□□ -2.03
HDDC3Q8N4P3 AC104237.2-201ENST00000612456 443 ntBASIC2.4□□□□□ -2.03
HDDC3Q8N4P3 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC2.4□□□□□ -2.03
HDDC3Q8N4P3 U4atac.1-201ENST00000618345 95 ntBASIC2.4□□□□□ -2.03
HDDC3Q8N4P3 AL353997.5-201ENST00000618886 171 ntBASIC2.4□□□□□ -2.03
HDDC3Q8N4P3 AC024940.5-201ENST00000622889 474 ntBASIC2.4□□□□□ -2.03
HDDC3Q8N4P3 MIR203B-201ENST00000636080 86 ntBASIC2.4□□□□□ -2.03
HDDC3Q8N4P3 AC241585.2-209ENST00000638217 143 ntBASIC2.4□□□□□ -2.03
HDDC3Q8N4P3 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.4□□□□□ -2.03
HDDC3Q8N4P3 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
HDDC3Q8N4P3 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
HDDC3Q8N4P3 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms