Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 SNORA57.1-201ENST00000391227 145 ntBASIC2.93□□□□□ -1.94
SHFQ7M4L6 RPL21P3-201ENST00000395517 478 ntBASIC2.93□□□□□ -1.94
SHFQ7M4L6 RNA5SP38-201ENST00000410750 119 ntBASIC2.93□□□□□ -1.94
SHFQ7M4L6 Y_RNA.623-201ENST00000411128 95 ntBASIC2.93□□□□□ -1.94
SHFQ7M4L6 Y_RNA.625-201ENST00000411256 107 ntBASIC2.93□□□□□ -1.94
SHFQ7M4L6 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.93□□□□□ -1.94
SHFQ7M4L6 AC007560.1-201ENST00000426912 237 ntBASIC2.93□□□□□ -1.94
SHFQ7M4L6 AC007389.2-201ENST00000434630 306 ntBASIC2.93□□□□□ -1.94
SHFQ7M4L6 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC2.93□□□□□ -1.94
SHFQ7M4L6 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.93□□□□□ -1.94
SHFQ7M4L6 MRPL50P4-201ENST00000446432 475 ntBASIC2.93□□□□□ -1.94
SHFQ7M4L6 RPL21P23-201ENST00000446654 460 ntBASIC2.93□□□□□ -1.94
SHFQ7M4L6 NDUFB1P2-201ENST00000449477 176 ntBASIC2.93□□□□□ -1.94
SHFQ7M4L6 AC092798.1-201ENST00000458542 409 ntBASIC2.93□□□□□ -1.94
SHFQ7M4L6 AC146507.2-201ENST00000460608 476 ntBASIC2.93□□□□□ -1.94
SHFQ7M4L6 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.93□□□□□ -1.94
SHFQ7M4L6 RPL32P34-201ENST00000486380 400 ntBASIC2.93□□□□□ -1.94
SHFQ7M4L6 AC103851.1-201ENST00000506833 274 ntBASIC2.93□□□□□ -1.94
SHFQ7M4L6 MIR892C-201ENST00000516410 77 ntBASIC2.93□□□□□ -1.94
SHFQ7M4L6 RNU1-103P-201ENST00000516502 125 ntBASIC2.93□□□□□ -1.94
SHFQ7M4L6 IGKV2-26-201ENST00000518305 343 ntBASIC2.93□□□□□ -1.94
SHFQ7M4L6 CYCSP27-201ENST00000527643 293 ntBASIC2.93□□□□□ -1.94
SHFQ7M4L6 RAB11AP2-201ENST00000545905 639 ntBASIC2.93□□□□□ -1.94
SHFQ7M4L6 APAF1-207ENST00000547743 651 ntTSL 3 BASIC2.93□□□□□ -1.94
SHFQ7M4L6 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC2.93□□□□□ -1.94
SHFQ7M4L6 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC2.93□□□□□ -1.94
SHFQ7M4L6 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC2.93□□□□□ -1.94
SHFQ7M4L6 AC005498.1-201ENST00000592125 465 ntBASIC2.93□□□□□ -1.94
SHFQ7M4L6 AL591516.1-201ENST00000611326 274 ntBASIC2.93□□□□□ -1.94
SHFQ7M4L6 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
SHFQ7M4L6 AL121772.2-201ENST00000614331 297 ntBASIC2.93□□□□□ -1.94
SHFQ7M4L6 PLCE1P1-201ENST00000622094 305 ntBASIC2.93□□□□□ -1.94
SHFQ7M4L6 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
SHFQ7M4L6 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
SHFQ7M4L6 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC2.93□□□□□ -1.94
SHFQ7M4L6 Y_RNA.184-201ENST00000363884 108 ntBASIC2.92□□□□□ -1.94
SHFQ7M4L6 Y_RNA.263-201ENST00000364659 114 ntBASIC2.92□□□□□ -1.94
SHFQ7M4L6 Y_RNA.301-201ENST00000364990 103 ntBASIC2.92□□□□□ -1.94
SHFQ7M4L6 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC2.92□□□□□ -1.94
SHFQ7M4L6 MIR888-201ENST00000401186 77 ntBASIC2.92□□□□□ -1.94
SHFQ7M4L6 RNA5SP229-201ENST00000410809 99 ntBASIC2.92□□□□□ -1.94
SHFQ7M4L6 RNA5SP344-201ENST00000411081 104 ntBASIC2.92□□□□□ -1.94
SHFQ7M4L6 CYCSP19-201ENST00000411715 316 ntBASIC2.92□□□□□ -1.94
SHFQ7M4L6 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC2.92□□□□□ -1.94
SHFQ7M4L6 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.92□□□□□ -1.94
SHFQ7M4L6 AL445584.1-201ENST00000431451 330 ntBASIC2.92□□□□□ -1.94
SHFQ7M4L6 AL365400.1-201ENST00000431854 640 ntBASIC2.92□□□□□ -1.94
SHFQ7M4L6 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.92□□□□□ -1.94
SHFQ7M4L6 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC2.92□□□□□ -1.94
SHFQ7M4L6 AL078601.1-201ENST00000444542 271 ntBASIC2.92□□□□□ -1.94
SHFQ7M4L6 MTND1P11-201ENST00000456661 876 ntBASIC2.92□□□□□ -1.94
SHFQ7M4L6 PPP1R2P5-201ENST00000457256 603 ntBASIC2.92□□□□□ -1.94
SHFQ7M4L6 RN7SL75P-201ENST00000461926 281 ntBASIC2.92□□□□□ -1.94
SHFQ7M4L6 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.92□□□□□ -1.94
SHFQ7M4L6 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC2.92□□□□□ -1.94
SHFQ7M4L6 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC2.92□□□□□ -1.94
SHFQ7M4L6 AP000889.2-201ENST00000532684 490 ntBASIC2.92□□□□□ -1.94
SHFQ7M4L6 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC2.92□□□□□ -1.94
SHFQ7M4L6 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.92□□□□□ -1.94
SHFQ7M4L6 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC2.92□□□□□ -1.94
SHFQ7M4L6 FGF7P1-201ENST00000582820 288 ntBASIC2.92□□□□□ -1.94
SHFQ7M4L6 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC2.92□□□□□ -1.94
SHFQ7M4L6 AL117336.2-201ENST00000602435 335 ntBASIC2.92□□□□□ -1.94
SHFQ7M4L6 AC004832.5-201ENST00000608677 401 ntBASIC2.92□□□□□ -1.94
SHFQ7M4L6 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.92□□□□□ -1.94
SHFQ7M4L6 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC2.92□□□□□ -1.94
SHFQ7M4L6 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.92□□□□□ -1.94
SHFQ7M4L6 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
SHFQ7M4L6 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.91□□□□□ -1.94
SHFQ7M4L6 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.91□□□□□ -1.94
SHFQ7M4L6 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
SHFQ7M4L6 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
SHFQ7M4L6 RNA5SP295-201ENST00000362655 121 ntBASIC2.91□□□□□ -1.94
SHFQ7M4L6 RNA5SP515-201ENST00000364570 118 ntBASIC2.91□□□□□ -1.94
SHFQ7M4L6 SNORA51.4-201ENST00000364993 124 ntBASIC2.91□□□□□ -1.94
SHFQ7M4L6 Y_RNA.324-201ENST00000365165 102 ntBASIC2.91□□□□□ -1.94
SHFQ7M4L6 Z98749.2-208ENST00000381646 500 ntBASIC2.91□□□□□ -1.94
SHFQ7M4L6 RNU1-73P-201ENST00000383971 164 ntBASIC2.91□□□□□ -1.94
SHFQ7M4L6 MIR218-2-201ENST00000385006 110 ntBASIC2.91□□□□□ -1.94
SHFQ7M4L6 MIR450B-201ENST00000401182 78 ntBASIC2.91□□□□□ -1.94
SHFQ7M4L6 AL122016.1-201ENST00000403365 367 ntBASIC2.91□□□□□ -1.94
SHFQ7M4L6 RN7SKP202-201ENST00000410439 330 ntBASIC2.91□□□□□ -1.94
SHFQ7M4L6 BMS1P22-201ENST00000414726 313 ntBASIC2.91□□□□□ -1.94
SHFQ7M4L6 HMGN2P30-201ENST00000423237 256 ntBASIC2.91□□□□□ -1.94
SHFQ7M4L6 AL627311.1-201ENST00000431514 115 ntBASIC2.91□□□□□ -1.94
SHFQ7M4L6 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.91□□□□□ -1.94
SHFQ7M4L6 AC091390.1-201ENST00000433904 331 ntBASIC2.91□□□□□ -1.94
SHFQ7M4L6 AC005019.1-201ENST00000436455 431 ntBASIC2.91□□□□□ -1.94
SHFQ7M4L6 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC2.91□□□□□ -1.94
SHFQ7M4L6 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC2.91□□□□□ -1.94
SHFQ7M4L6 AC010099.1-201ENST00000455434 375 ntBASIC2.91□□□□□ -1.94
SHFQ7M4L6 AC068587.1-201ENST00000483613 781 ntBASIC2.91□□□□□ -1.94
SHFQ7M4L6 RPS29P20-201ENST00000489592 171 ntBASIC2.91□□□□□ -1.94
SHFQ7M4L6 TRBVA-201ENST00000498804 316 ntBASIC2.91□□□□□ -1.94
SHFQ7M4L6 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.91□□□□□ -1.94
SHFQ7M4L6 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC2.91□□□□□ -1.94
SHFQ7M4L6 AC008549.1-201ENST00000512900 643 ntBASIC2.91□□□□□ -1.94
SHFQ7M4L6 RNU6-256P-201ENST00000516747 97 ntBASIC2.91□□□□□ -1.94
SHFQ7M4L6 RNU6-1088P-201ENST00000516850 104 ntBASIC2.91□□□□□ -1.94
SHFQ7M4L6 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 122.7 ms