Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 PTMAP2-201ENST00000397627 327 ntBASIC3.59□□□□□ -1.83
KHDC1Q4VXA5 RN7SKP27-201ENST00000410684 333 ntBASIC3.59□□□□□ -1.83
KHDC1Q4VXA5 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC3.59□□□□□ -1.83
KHDC1Q4VXA5 AL590632.1-201ENST00000424289 371 ntBASIC3.59□□□□□ -1.83
KHDC1Q4VXA5 AC006989.1-201ENST00000427212 131 ntBASIC3.59□□□□□ -1.83
KHDC1Q4VXA5 AC091286.1-201ENST00000431233 461 ntBASIC3.59□□□□□ -1.83
KHDC1Q4VXA5 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC3.59□□□□□ -1.83
KHDC1Q4VXA5 RPS3AP46-201ENST00000448352 682 ntBASIC3.59□□□□□ -1.83
KHDC1Q4VXA5 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC3.59□□□□□ -1.83
KHDC1Q4VXA5 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.59□□□□□ -1.83
KHDC1Q4VXA5 AC006445.2-201ENST00000510061 472 ntBASIC3.59□□□□□ -1.83
KHDC1Q4VXA5 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.59□□□□□ -1.83
KHDC1Q4VXA5 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC3.59□□□□□ -1.83
KHDC1Q4VXA5 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.59□□□□□ -1.83
KHDC1Q4VXA5 RNU1-103P-201ENST00000516502 125 ntBASIC3.59□□□□□ -1.83
KHDC1Q4VXA5 Y_RNA.718-201ENST00000517110 102 ntBASIC3.59□□□□□ -1.83
KHDC1Q4VXA5 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.59□□□□□ -1.83
KHDC1Q4VXA5 AC026403.1-201ENST00000518938 295 ntBASIC3.59□□□□□ -1.83
KHDC1Q4VXA5 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC3.59□□□□□ -1.83
KHDC1Q4VXA5 HIGD1AP1-201ENST00000550979 275 ntBASIC3.59□□□□□ -1.83
KHDC1Q4VXA5 MIR5047-201ENST00000579212 100 ntBASIC3.59□□□□□ -1.83
KHDC1Q4VXA5 MIR3922-201ENST00000585192 84 ntBASIC3.59□□□□□ -1.83
KHDC1Q4VXA5 AP000787.2-201ENST00000604432 568 ntBASIC3.59□□□□□ -1.83
KHDC1Q4VXA5 MIR6076-201ENST00000617521 113 ntBASIC3.59□□□□□ -1.83
KHDC1Q4VXA5 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC3.59□□□□□ -1.83
KHDC1Q4VXA5 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.59□□□□□ -1.83
KHDC1Q4VXA5 Z69720.2-201ENST00000624755 279 ntBASIC3.59□□□□□ -1.83
KHDC1Q4VXA5 AL034408.1-202ENST00000636088 415 ntBASIC3.59□□□□□ -1.83
KHDC1Q4VXA5 U6.99-201ENST00000637524 83 ntBASIC3.59□□□□□ -1.83
KHDC1Q4VXA5 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.59□□□□□ -1.83
KHDC1Q4VXA5 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC3.59□□□□□ -1.83
KHDC1Q4VXA5 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.59□□□□□ -1.84
KHDC1Q4VXA5 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.84
KHDC1Q4VXA5 AF117829.1-206ENST00000621883 3802 ntBASIC3.59□□□□□ -1.84
KHDC1Q4VXA5 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.84
KHDC1Q4VXA5 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.59□□□□□ -1.84
KHDC1Q4VXA5 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.59□□□□□ -1.84
KHDC1Q4VXA5 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
KHDC1Q4VXA5 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.58□□□□□ -1.84
KHDC1Q4VXA5 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.58□□□□□ -1.84
KHDC1Q4VXA5 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
KHDC1Q4VXA5 RNU6-778P-201ENST00000363269 103 ntBASIC3.58□□□□□ -1.84
KHDC1Q4VXA5 AL356057.2-201ENST00000403318 432 ntBASIC3.58□□□□□ -1.84
KHDC1Q4VXA5 RPL26P27-201ENST00000414397 437 ntBASIC3.58□□□□□ -1.84
KHDC1Q4VXA5 AF228730.4-201ENST00000421457 183 ntBASIC3.58□□□□□ -1.84
KHDC1Q4VXA5 PGBD4P6-201ENST00000421501 610 ntBASIC3.58□□□□□ -1.84
KHDC1Q4VXA5 TOMM20P4-201ENST00000427861 435 ntBASIC3.58□□□□□ -1.84
KHDC1Q4VXA5 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.58□□□□□ -1.84
KHDC1Q4VXA5 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC3.58□□□□□ -1.84
KHDC1Q4VXA5 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
KHDC1Q4VXA5 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC3.58□□□□□ -1.84
KHDC1Q4VXA5 MIR4782-201ENST00000577987 79 ntBASIC3.58□□□□□ -1.84
KHDC1Q4VXA5 MIR4429-201ENST00000580105 73 ntBASIC3.58□□□□□ -1.84
KHDC1Q4VXA5 MIR3609-201ENST00000582661 80 ntBASIC3.58□□□□□ -1.84
KHDC1Q4VXA5 MIR5690-201ENST00000583739 73 ntBASIC3.58□□□□□ -1.84
KHDC1Q4VXA5 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.58□□□□□ -1.84
KHDC1Q4VXA5 AC012468.1-201ENST00000604888 430 ntBASIC3.58□□□□□ -1.84
KHDC1Q4VXA5 ELOCP5-201ENST00000604924 333 ntBASIC3.58□□□□□ -1.84
KHDC1Q4VXA5 MIR6128-201ENST00000615528 109 ntBASIC3.58□□□□□ -1.84
KHDC1Q4VXA5 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.58□□□□□ -1.84
KHDC1Q4VXA5 MTND4LP32-201ENST00000636111 270 ntBASIC3.58□□□□□ -1.84
KHDC1Q4VXA5 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
KHDC1Q4VXA5 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.58□□□□□ -1.84
KHDC1Q4VXA5 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
KHDC1Q4VXA5 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
KHDC1Q4VXA5 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.57□□□□□ -1.84
KHDC1Q4VXA5 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
KHDC1Q4VXA5 SNORD62.1-201ENST00000362541 86 ntBASIC3.57□□□□□ -1.84
KHDC1Q4VXA5 RNU6-270P-201ENST00000364131 105 ntBASIC3.57□□□□□ -1.84
KHDC1Q4VXA5 RNA5SP42-201ENST00000364278 115 ntBASIC3.57□□□□□ -1.84
KHDC1Q4VXA5 RNU1-73P-201ENST00000383971 164 ntBASIC3.57□□□□□ -1.84
KHDC1Q4VXA5 SNORD116-29-201ENST00000384516 83 ntBASIC3.57□□□□□ -1.84
KHDC1Q4VXA5 RNU6-601P-201ENST00000384540 107 ntBASIC3.57□□□□□ -1.84
KHDC1Q4VXA5 MTCYBP4-201ENST00000401524 249 ntBASIC3.57□□□□□ -1.84
KHDC1Q4VXA5 MORN2-203ENST00000409131 544 ntTSL 5 BASIC3.57□□□□□ -1.84
KHDC1Q4VXA5 RNU6-370P-201ENST00000411008 104 ntBASIC3.57□□□□□ -1.84
KHDC1Q4VXA5 AC017079.2-201ENST00000416102 485 ntBASIC3.57□□□□□ -1.84
KHDC1Q4VXA5 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC3.57□□□□□ -1.84
KHDC1Q4VXA5 HMGN2P30-201ENST00000423237 256 ntBASIC3.57□□□□□ -1.84
KHDC1Q4VXA5 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.57□□□□□ -1.84
KHDC1Q4VXA5 HIGD1AP11-201ENST00000438361 280 ntBASIC3.57□□□□□ -1.84
KHDC1Q4VXA5 AC007677.1-201ENST00000445757 515 ntBASIC3.57□□□□□ -1.84
KHDC1Q4VXA5 AL590664.1-201ENST00000448065 339 ntBASIC3.57□□□□□ -1.84
KHDC1Q4VXA5 HMGN2P7-201ENST00000456186 273 ntBASIC3.57□□□□□ -1.84
KHDC1Q4VXA5 RPS4XP2-201ENST00000458402 793 ntBASIC3.57□□□□□ -1.84
KHDC1Q4VXA5 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.57□□□□□ -1.84
KHDC1Q4VXA5 AC116337.1-201ENST00000509680 687 ntBASIC3.57□□□□□ -1.84
KHDC1Q4VXA5 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.57□□□□□ -1.84
KHDC1Q4VXA5 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.57□□□□□ -1.84
KHDC1Q4VXA5 RNU6-928P-201ENST00000516876 104 ntBASIC3.57□□□□□ -1.84
KHDC1Q4VXA5 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.57□□□□□ -1.84
KHDC1Q4VXA5 APOOP3-201ENST00000536787 586 ntBASIC3.57□□□□□ -1.84
KHDC1Q4VXA5 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.57□□□□□ -1.84
KHDC1Q4VXA5 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.57□□□□□ -1.84
KHDC1Q4VXA5 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC3.57□□□□□ -1.84
KHDC1Q4VXA5 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.57□□□□□ -1.84
KHDC1Q4VXA5 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC3.57□□□□□ -1.84
KHDC1Q4VXA5 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.57□□□□□ -1.84
KHDC1Q4VXA5 AC123912.5-201ENST00000605470 343 ntBASIC3.57□□□□□ -1.84
KHDC1Q4VXA5 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 301.2 ms