Protein–RNA interactions for Protein: P52701

MSH6, DNA mismatch repair protein Msh6, humanhuman

Predictions only

Length 1,360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6P52701 AC015720.1-201ENST00000565251 277 ntBASIC2.25□□□□□ -2.05
MSH6P52701 MIR4999-201ENST00000585029 91 ntBASIC2.25□□□□□ -2.05
MSH6P52701 HMGN2P15-201ENST00000585707 270 ntBASIC2.25□□□□□ -2.05
MSH6P52701 APOOP1-201ENST00000604695 592 ntBASIC2.25□□□□□ -2.05
MSH6P52701 AC107952.2-201ENST00000606048 486 ntBASIC2.25□□□□□ -2.05
MSH6P52701 AC007038.2-201ENST00000608095 740 ntBASIC2.25□□□□□ -2.05
MSH6P52701 MIR6840-201ENST00000611937 71 ntBASIC2.25□□□□□ -2.05
MSH6P52701 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
MSH6P52701 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.25□□□□□ -2.05
MSH6P52701 OR4G1P-203ENST00000641984 1631 ntBASIC2.25□□□□□ -2.05
MSH6P52701 AC092125.1-201ENST00000562568 1995 ntBASIC2.24□□□□□ -2.05
MSH6P52701 MIR888-201ENST00000401186 77 ntBASIC2.24□□□□□ -2.05
MSH6P52701 SUMO2P12-201ENST00000405924 140 ntBASIC2.24□□□□□ -2.05
MSH6P52701 AL008987.1-201ENST00000415528 237 ntBASIC2.24□□□□□ -2.05
MSH6P52701 AC244035.1-201ENST00000430042 390 ntBASIC2.24□□□□□ -2.05
MSH6P52701 GTF2IP20-201ENST00000431663 360 ntBASIC2.24□□□□□ -2.05
MSH6P52701 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC2.24□□□□□ -2.05
MSH6P52701 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC2.24□□□□□ -2.05
MSH6P52701 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC2.24□□□□□ -2.05
MSH6P52701 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC2.24□□□□□ -2.05
MSH6P52701 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
MSH6P52701 AC104685.1-201ENST00000502445 371 ntBASIC2.24□□□□□ -2.05
MSH6P52701 AC020699.1-201ENST00000505161 445 ntBASIC2.24□□□□□ -2.05
MSH6P52701 SUMO2P6-201ENST00000505273 288 ntBASIC2.24□□□□□ -2.05
MSH6P52701 AC114786.4-201ENST00000508771 728 ntBASIC2.24□□□□□ -2.05
MSH6P52701 AC008526.1-201ENST00000509149 338 ntBASIC2.24□□□□□ -2.05
MSH6P52701 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.24□□□□□ -2.05
MSH6P52701 AC114797.1-201ENST00000514003 728 ntBASIC2.24□□□□□ -2.05
MSH6P52701 RNU6-390P-201ENST00000516259 103 ntBASIC2.24□□□□□ -2.05
MSH6P52701 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC2.24□□□□□ -2.05
MSH6P52701 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC2.24□□□□□ -2.05
MSH6P52701 AC023050.2-201ENST00000544968 387 ntBASIC2.24□□□□□ -2.05
MSH6P52701 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.24□□□□□ -2.05
MSH6P52701 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC2.24□□□□□ -2.05
MSH6P52701 MIR4419B-201ENST00000577260 68 ntBASIC2.24□□□□□ -2.05
MSH6P52701 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC2.24□□□□□ -2.05
MSH6P52701 AC022709.1-201ENST00000615967 87 ntBASIC2.24□□□□□ -2.05
MSH6P52701 AC005296.1-201ENST00000616145 209 ntBASIC2.24□□□□□ -2.05
MSH6P52701 uc_338.20-201ENST00000621563 178 ntBASIC2.24□□□□□ -2.05
MSH6P52701 AC091965.5-201ENST00000624785 342 ntBASIC2.24□□□□□ -2.05
MSH6P52701 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC2.24□□□□□ -2.05
MSH6P52701 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.24□□□□□ -2.05
MSH6P52701 ZNF209P-201ENST00000593450 2304 ntBASIC2.24□□□□□ -2.05
MSH6P52701 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
MSH6P52701 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC2.23□□□□□ -2.05
MSH6P52701 RNU6-884P-201ENST00000363889 107 ntBASIC2.23□□□□□ -2.05
MSH6P52701 AC119751.3-201ENST00000399720 670 ntBASIC2.23□□□□□ -2.05
MSH6P52701 AL139397.2-201ENST00000404529 772 ntBASIC2.23□□□□□ -2.05
MSH6P52701 AC023141.4-201ENST00000412031 328 ntBASIC2.23□□□□□ -2.05
MSH6P52701 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC2.23□□□□□ -2.05
MSH6P52701 TEX41-202ENST00000414256 604 ntTSL 5 BASIC2.23□□□□□ -2.05
MSH6P52701 MTND1P20-201ENST00000430341 950 ntBASIC2.23□□□□□ -2.05
MSH6P52701 LARP1BP3-201ENST00000437229 869 ntBASIC2.23□□□□□ -2.05
MSH6P52701 AC005094.1-201ENST00000440420 368 ntBASIC2.23□□□□□ -2.05
MSH6P52701 RPS15AP27-201ENST00000449183 343 ntBASIC2.23□□□□□ -2.05
MSH6P52701 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC2.23□□□□□ -2.05
MSH6P52701 AC013267.1-201ENST00000458227 267 ntBASIC2.23□□□□□ -2.05
MSH6P52701 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC2.23□□□□□ -2.05
MSH6P52701 AC034244.1-201ENST00000507687 207 ntBASIC2.23□□□□□ -2.05
MSH6P52701 HMGB3P3-201ENST00000510526 400 ntBASIC2.23□□□□□ -2.05
MSH6P52701 AC113155.1-201ENST00000511141 769 ntBASIC2.23□□□□□ -2.05
MSH6P52701 MTND5P13-201ENST00000513046 1079 ntBASIC2.23□□□□□ -2.05
MSH6P52701 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC2.23□□□□□ -2.05
MSH6P52701 GLYCAM1-201ENST00000546596 285 ntBASIC2.23□□□□□ -2.05
MSH6P52701 AC104581.2-201ENST00000572227 430 ntBASIC2.23□□□□□ -2.05
MSH6P52701 AC005498.1-201ENST00000592125 465 ntBASIC2.23□□□□□ -2.05
MSH6P52701 BNIP3P23-201ENST00000599655 511 ntBASIC2.23□□□□□ -2.05
MSH6P52701 AL355472.4-201ENST00000610233 626 ntBASIC2.23□□□□□ -2.05
MSH6P52701 AC103706.2-201ENST00000638080 240 ntBASIC2.23□□□□□ -2.05
MSH6P52701 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.23□□□□□ -2.05
MSH6P52701 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
MSH6P52701 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
MSH6P52701 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
MSH6P52701 RNU4-28P-201ENST00000364739 141 ntBASIC2.23□□□□□ -2.05
MSH6P52701 SNORD48-201ENST00000364953 64 ntBASIC2.23□□□□□ -2.05
MSH6P52701 MIR767-201ENST00000390228 109 ntBASIC2.23□□□□□ -2.05
MSH6P52701 MIR1323-201ENST00000408090 73 ntBASIC2.23□□□□□ -2.05
MSH6P52701 RNA5SP489-201ENST00000410986 109 ntBASIC2.23□□□□□ -2.05
MSH6P52701 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.23□□□□□ -2.05
MSH6P52701 AL513185.2-201ENST00000425543 193 ntBASIC2.23□□□□□ -2.05
MSH6P52701 ELOCP14-201ENST00000428070 331 ntBASIC2.23□□□□□ -2.05
MSH6P52701 ELOCP7-201ENST00000439968 331 ntBASIC2.23□□□□□ -2.05
MSH6P52701 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.23□□□□□ -2.05
MSH6P52701 ANKRD26P4-201ENST00000455755 950 ntBASIC2.23□□□□□ -2.05
MSH6P52701 MRPL42P6-201ENST00000486397 371 ntBASIC2.23□□□□□ -2.05
MSH6P52701 RPS15AP34-201ENST00000487776 387 ntBASIC2.23□□□□□ -2.05
MSH6P52701 RPS29P20-201ENST00000489592 171 ntBASIC2.23□□□□□ -2.05
MSH6P52701 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC2.23□□□□□ -2.05
MSH6P52701 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
MSH6P52701 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC2.23□□□□□ -2.05
MSH6P52701 LTV1P1-201ENST00000510683 1237 ntBASIC2.23□□□□□ -2.05
MSH6P52701 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC2.23□□□□□ -2.05
MSH6P52701 RNA5SP364-201ENST00000516938 78 ntBASIC2.23□□□□□ -2.05
MSH6P52701 RNA5SP471-201ENST00000516971 106 ntBASIC2.23□□□□□ -2.05
MSH6P52701 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC2.23□□□□□ -2.05
MSH6P52701 AC013828.2-201ENST00000532487 235 ntBASIC2.23□□□□□ -2.05
MSH6P52701 AC093012.1-202ENST00000549403 582 ntBASIC2.23□□□□□ -2.05
MSH6P52701 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.23□□□□□ -2.05
MSH6P52701 MTND4LP5-201ENST00000605152 292 ntBASIC2.23□□□□□ -2.05
MSH6P52701 AC013244.3-201ENST00000605614 388 ntBASIC2.23□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms