Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 uc_338.17-201ENST00000619633 179 ntBASIC0.56□□□□□ -2.32
CLIP1P30622 AC008443.7-201ENST00000622195 246 ntBASIC0.56□□□□□ -2.32
CLIP1P30622 MTND2P41-201ENST00000637599 773 ntBASIC0.56□□□□□ -2.32
CLIP1P30622 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC0.56□□□□□ -2.32
CLIP1P30622 RNU6-288P-201ENST00000363690 104 ntBASIC0.55□□□□□ -2.32
CLIP1P30622 RNU4-67P-201ENST00000364569 141 ntBASIC0.55□□□□□ -2.32
CLIP1P30622 RNU6-418P-201ENST00000384035 107 ntBASIC0.55□□□□□ -2.32
CLIP1P30622 SNORA29-201ENST00000384183 140 ntBASIC0.55□□□□□ -2.32
CLIP1P30622 AL117342.1-201ENST00000404861 406 ntBASIC0.55□□□□□ -2.32
CLIP1P30622 AC099677.1-201ENST00000420575 175 ntBASIC0.55□□□□□ -2.32
CLIP1P30622 RPL7P29-201ENST00000437151 728 ntBASIC0.55□□□□□ -2.32
CLIP1P30622 AL135790.2-201ENST00000437701 267 ntBASIC0.55□□□□□ -2.32
CLIP1P30622 MTCYBP16-201ENST00000509187 1129 ntBASIC0.55□□□□□ -2.32
CLIP1P30622 PSMC1P5-201ENST00000512850 177 ntBASIC0.55□□□□□ -2.32
CLIP1P30622 AC136628.3-201ENST00000521868 290 ntBASIC0.55□□□□□ -2.32
CLIP1P30622 CASP1-212ENST00000531166 300 ntTSL 5 BASIC0.55□□□□□ -2.32
CLIP1P30622 RAB11AP2-201ENST00000545905 639 ntBASIC0.55□□□□□ -2.32
CLIP1P30622 AC021739.1-201ENST00000559631 174 ntBASIC0.55□□□□□ -2.32
CLIP1P30622 MIR4661-201ENST00000582720 75 ntBASIC0.55□□□□□ -2.32
CLIP1P30622 AC025588.3-201ENST00000604182 274 ntBASIC0.55□□□□□ -2.32
CLIP1P30622 AC013468.1-201ENST00000608680 598 ntBASIC0.55□□□□□ -2.32
CLIP1P30622 AP002826.1-201ENST00000608835 315 ntBASIC0.55□□□□□ -2.32
CLIP1P30622 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC0.55□□□□□ -2.32
CLIP1P30622 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC0.55□□□□□ -2.32
CLIP1P30622 DSTNP4-201ENST00000399472 474 ntBASIC0.55□□□□□ -2.32
CLIP1P30622 DDX3P2-201ENST00000446138 111 ntBASIC0.55□□□□□ -2.32
CLIP1P30622 MTND5P8-201ENST00000449817 1083 ntBASIC0.55□□□□□ -2.32
CLIP1P30622 AC114786.4-201ENST00000508771 728 ntBASIC0.55□□□□□ -2.32
CLIP1P30622 AC114797.1-201ENST00000514003 728 ntBASIC0.55□□□□□ -2.32
CLIP1P30622 RNA5SP285-201ENST00000516619 119 ntBASIC0.55□□□□□ -2.32
CLIP1P30622 AC034114.1-201ENST00000520293 285 ntBASIC0.55□□□□□ -2.32
CLIP1P30622 AC008562.1-201ENST00000521763 330 ntBASIC0.55□□□□□ -2.32
CLIP1P30622 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC0.55□□□□□ -2.32
CLIP1P30622 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC0.55□□□□□ -2.32
CLIP1P30622 AC009974.1-201ENST00000608881 455 ntBASIC0.55□□□□□ -2.32
CLIP1P30622 AC002550.2-201ENST00000621246 394 ntBASIC0.55□□□□□ -2.32
CLIP1P30622 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.54□□□□□ -2.32
CLIP1P30622 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.54□□□□□ -2.32
CLIP1P30622 Y_RNA.471-201ENST00000384312 102 ntBASIC0.54□□□□□ -2.32
CLIP1P30622 AC009310.1-201ENST00000414414 451 ntBASIC0.54□□□□□ -2.32
CLIP1P30622 AL589880.1-201ENST00000448271 287 ntBASIC0.54□□□□□ -2.32
CLIP1P30622 AC111000.5-201ENST00000506559 1178 ntBASIC0.54□□□□□ -2.32
CLIP1P30622 SNORA31.6-201ENST00000516241 130 ntBASIC0.54□□□□□ -2.32
CLIP1P30622 AP003327.1-201ENST00000529684 127 ntBASIC0.54□□□□□ -2.32
CLIP1P30622 AC006518.2-201ENST00000542513 940 ntBASIC0.54□□□□□ -2.32
CLIP1P30622 AC012435.1-202ENST00000568772 240 ntBASIC0.54□□□□□ -2.32
CLIP1P30622 HMGN2P15-201ENST00000585707 270 ntBASIC0.54□□□□□ -2.32
CLIP1P30622 DLEU1_2.1-201ENST00000617920 342 ntBASIC0.54□□□□□ -2.32
CLIP1P30622 U3.8-201ENST00000363675 217 ntBASIC0.53□□□□□ -2.32
CLIP1P30622 RNU6-173P-201ENST00000364215 104 ntBASIC0.53□□□□□ -2.32
CLIP1P30622 RNU6-1083P-201ENST00000384022 107 ntBASIC0.53□□□□□ -2.32
CLIP1P30622 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.53□□□□□ -2.32
CLIP1P30622 RNU6-821P-201ENST00000390995 107 ntBASIC0.53□□□□□ -2.32
CLIP1P30622 OFD1P2Y-201ENST00000421895 1149 ntBASIC0.53□□□□□ -2.32
CLIP1P30622 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC0.53□□□□□ -2.32
CLIP1P30622 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC0.53□□□□□ -2.32
CLIP1P30622 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC0.53□□□□□ -2.32
CLIP1P30622 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC0.53□□□□□ -2.32
CLIP1P30622 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC0.53□□□□□ -2.32
CLIP1P30622 EEF1B2P4-201ENST00000551398 348 ntBASIC0.53□□□□□ -2.32
CLIP1P30622 AC093510.2-201ENST00000562820 896 ntBASIC0.53□□□□□ -2.32
CLIP1P30622 BX322635.1-201ENST00000605804 496 ntBASIC0.53□□□□□ -2.32
CLIP1P30622 AC090116.1-201ENST00000615679 446 ntBASIC0.53□□□□□ -2.32
CLIP1P30622 RNU4-31P-201ENST00000384211 141 ntBASIC0.52□□□□□ -2.33
CLIP1P30622 RNU6-452P-201ENST00000384406 107 ntBASIC0.52□□□□□ -2.33
CLIP1P30622 MIR325-201ENST00000385260 98 ntBASIC0.52□□□□□ -2.33
CLIP1P30622 RNU2-49P-201ENST00000410666 184 ntBASIC0.52□□□□□ -2.33
CLIP1P30622 LINC01347-201ENST00000417964 355 ntBASIC0.52□□□□□ -2.33
CLIP1P30622 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC0.52□□□□□ -2.33
CLIP1P30622 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC0.52□□□□□ -2.33
CLIP1P30622 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC0.52□□□□□ -2.33
CLIP1P30622 MTND2P19-201ENST00000449129 1012 ntBASIC0.52□□□□□ -2.33
CLIP1P30622 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC0.52□□□□□ -2.33
CLIP1P30622 GTF2IP12-201ENST00000456547 356 ntBASIC0.52□□□□□ -2.33
CLIP1P30622 RPS27P22-201ENST00000478056 241 ntBASIC0.52□□□□□ -2.33
CLIP1P30622 RAP1BP2-201ENST00000478270 544 ntBASIC0.52□□□□□ -2.33
CLIP1P30622 AP001025.1-201ENST00000486139 332 ntBASIC0.52□□□□□ -2.33
CLIP1P30622 AC145146.1-201ENST00000496370 254 ntBASIC0.52□□□□□ -2.33
CLIP1P30622 CENPUP1-201ENST00000526649 1202 ntBASIC0.52□□□□□ -2.33
CLIP1P30622 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC0.52□□□□□ -2.33
CLIP1P30622 APOOP3-201ENST00000536787 586 ntBASIC0.52□□□□□ -2.33
CLIP1P30622 MIR6759-201ENST00000638110 65 ntBASIC0.52□□□□□ -2.33
CLIP1P30622 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC0.52□□□□□ -2.33
CLIP1P30622 MTCO1P23-201ENST00000415223 1526 ntBASIC0.52□□□□□ -2.33
CLIP1P30622 RNA5SP327-201ENST00000362494 101 ntBASIC0.51□□□□□ -2.33
CLIP1P30622 RNU6-105P-201ENST00000363909 104 ntBASIC0.51□□□□□ -2.33
CLIP1P30622 RNU6-1226P-201ENST00000384317 107 ntBASIC0.51□□□□□ -2.33
CLIP1P30622 AC019070.1-201ENST00000415008 1024 ntBASIC0.51□□□□□ -2.33
CLIP1P30622 RPL26P9-201ENST00000457466 433 ntBASIC0.51□□□□□ -2.33
CLIP1P30622 AL359212.1-201ENST00000556608 614 ntBASIC0.51□□□□□ -2.33
CLIP1P30622 AC010620.1-201ENST00000601088 1102 ntBASIC0.51□□□□□ -2.33
CLIP1P30622 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.5□□□□□ -2.33
CLIP1P30622 RNU2-64P-201ENST00000411315 191 ntBASIC0.5□□□□□ -2.33
CLIP1P30622 AC069282.1-201ENST00000411911 526 ntBASIC0.5□□□□□ -2.33
CLIP1P30622 AC023141.4-201ENST00000412031 328 ntBASIC0.5□□□□□ -2.33
CLIP1P30622 RPS24P7-201ENST00000416921 246 ntBASIC0.5□□□□□ -2.33
CLIP1P30622 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC0.5□□□□□ -2.33
CLIP1P30622 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC0.5□□□□□ -2.33
CLIP1P30622 BUD31P2-201ENST00000449374 300 ntBASIC0.5□□□□□ -2.33
CLIP1P30622 snoU13.9-201ENST00000458927 103 ntBASIC0.5□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 122.6 ms