Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 AC009812.4-201ENST00000569134 1805 ntBASIC3.81□□□□□ -1.8
HLA-DOAP06340 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
HLA-DOAP06340 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
HLA-DOAP06340 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.8□□□□□ -1.8
HLA-DOAP06340 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
HLA-DOAP06340 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.8□□□□□ -1.8
HLA-DOAP06340 Y_RNA.5-201ENST00000362334 102 ntBASIC3.8□□□□□ -1.8
HLA-DOAP06340 Y_RNA.28-201ENST00000362554 111 ntBASIC3.8□□□□□ -1.8
HLA-DOAP06340 AL139396.1-201ENST00000421137 167 ntBASIC3.8□□□□□ -1.8
HLA-DOAP06340 MTATP6P4-201ENST00000427725 675 ntBASIC3.8□□□□□ -1.8
HLA-DOAP06340 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.8□□□□□ -1.8
HLA-DOAP06340 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC3.8□□□□□ -1.8
HLA-DOAP06340 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.8□□□□□ -1.8
HLA-DOAP06340 AC010285.1-201ENST00000470580 392 ntBASIC3.8□□□□□ -1.8
HLA-DOAP06340 RNU6-120P-201ENST00000516077 103 ntBASIC3.8□□□□□ -1.8
HLA-DOAP06340 SNORA14.1-201ENST00000516113 141 ntBASIC3.8□□□□□ -1.8
HLA-DOAP06340 RN7SKP60-201ENST00000516985 239 ntBASIC3.8□□□□□ -1.8
HLA-DOAP06340 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.8□□□□□ -1.8
HLA-DOAP06340 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.8□□□□□ -1.8
HLA-DOAP06340 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.8□□□□□ -1.8
HLA-DOAP06340 AC100830.2-201ENST00000581636 240 ntBASIC3.8□□□□□ -1.8
HLA-DOAP06340 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.8□□□□□ -1.8
HLA-DOAP06340 U2.17-201ENST00000611454 95 ntBASIC3.8□□□□□ -1.8
HLA-DOAP06340 AC007998.5-201ENST00000622938 237 ntBASIC3.8□□□□□ -1.8
HLA-DOAP06340 AC092608.2-201ENST00000624427 218 ntBASIC3.8□□□□□ -1.8
HLA-DOAP06340 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.8□□□□□ -1.8
HLA-DOAP06340 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.8□□□□□ -1.8
HLA-DOAP06340 FAM35DP-201ENST00000323387 2712 ntBASIC3.79□□□□□ -1.8
HLA-DOAP06340 MTND5P16-201ENST00000460269 1703 ntBASIC3.79□□□□□ -1.8
HLA-DOAP06340 AC138393.1-203ENST00000327086 343 ntBASIC3.79□□□□□ -1.8
HLA-DOAP06340 RNU6-562P-201ENST00000362731 107 ntBASIC3.79□□□□□ -1.8
HLA-DOAP06340 Y_RNA.133-201ENST00000363428 110 ntBASIC3.79□□□□□ -1.8
HLA-DOAP06340 Y_RNA.404-201ENST00000383978 102 ntBASIC3.79□□□□□ -1.8
HLA-DOAP06340 RNU6-26P-201ENST00000383985 107 ntBASIC3.79□□□□□ -1.8
HLA-DOAP06340 RNU6-639P-201ENST00000384074 107 ntBASIC3.79□□□□□ -1.8
HLA-DOAP06340 SNORA36C-201ENST00000384289 132 ntBASIC3.79□□□□□ -1.8
HLA-DOAP06340 Y_RNA.482-201ENST00000384377 111 ntBASIC3.79□□□□□ -1.8
HLA-DOAP06340 RNU6-1105P-201ENST00000384774 107 ntBASIC3.79□□□□□ -1.8
HLA-DOAP06340 UBA52P6-201ENST00000399822 382 ntBASIC3.79□□□□□ -1.8
HLA-DOAP06340 RNU6-954P-201ENST00000411355 107 ntBASIC3.79□□□□□ -1.8
HLA-DOAP06340 RPLP0P7-201ENST00000416050 667 ntBASIC3.79□□□□□ -1.8
HLA-DOAP06340 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC3.79□□□□□ -1.8
HLA-DOAP06340 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC3.79□□□□□ -1.8
HLA-DOAP06340 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.79□□□□□ -1.8
HLA-DOAP06340 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.79□□□□□ -1.8
HLA-DOAP06340 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.79□□□□□ -1.8
HLA-DOAP06340 RNU7-167P-201ENST00000459160 62 ntBASIC3.79□□□□□ -1.8
HLA-DOAP06340 S100A11P2-201ENST00000467589 312 ntBASIC3.79□□□□□ -1.8
HLA-DOAP06340 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.79□□□□□ -1.8
HLA-DOAP06340 Vault.1-201ENST00000516474 102 ntBASIC3.79□□□□□ -1.8
HLA-DOAP06340 RNU6-1069P-201ENST00000516612 133 ntBASIC3.79□□□□□ -1.8
HLA-DOAP06340 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3.79□□□□□ -1.8
HLA-DOAP06340 AL355836.1-201ENST00000555951 870 ntBASIC3.79□□□□□ -1.8
HLA-DOAP06340 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.79□□□□□ -1.8
HLA-DOAP06340 MIR5690-201ENST00000583739 73 ntBASIC3.79□□□□□ -1.8
HLA-DOAP06340 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.79□□□□□ -1.8
HLA-DOAP06340 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.79□□□□□ -1.8
HLA-DOAP06340 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.79□□□□□ -1.8
HLA-DOAP06340 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
HLA-DOAP06340 KPNA2P1-201ENST00000458289 1591 ntBASIC3.79□□□□□ -1.8
HLA-DOAP06340 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
HLA-DOAP06340 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
HLA-DOAP06340 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
HLA-DOAP06340 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
HLA-DOAP06340 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
HLA-DOAP06340 AC093010.3-201ENST00000570269 15214 ntBASIC3.78□□□□□ -1.8
HLA-DOAP06340 MTND5P30-201ENST00000452896 1731 ntBASIC3.78□□□□□ -1.8
HLA-DOAP06340 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
HLA-DOAP06340 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
HLA-DOAP06340 RNA5SP502-201ENST00000362694 119 ntBASIC3.78□□□□□ -1.8
HLA-DOAP06340 RNU6-1309P-201ENST00000363305 108 ntBASIC3.78□□□□□ -1.8
HLA-DOAP06340 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
HLA-DOAP06340 RNU6-890P-201ENST00000384121 107 ntBASIC3.78□□□□□ -1.8
HLA-DOAP06340 RNU6-190P-201ENST00000384154 102 ntBASIC3.78□□□□□ -1.8
HLA-DOAP06340 SNORA7.4-201ENST00000384249 137 ntBASIC3.78□□□□□ -1.8
HLA-DOAP06340 RNU6-306P-201ENST00000384617 107 ntBASIC3.78□□□□□ -1.8
HLA-DOAP06340 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.78□□□□□ -1.8
HLA-DOAP06340 RPL23AP69-201ENST00000431134 458 ntBASIC3.78□□□□□ -1.8
HLA-DOAP06340 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.78□□□□□ -1.8
HLA-DOAP06340 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.78□□□□□ -1.8
HLA-DOAP06340 RPL7P42-201ENST00000481005 679 ntBASIC3.78□□□□□ -1.8
HLA-DOAP06340 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC3.78□□□□□ -1.8
HLA-DOAP06340 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.78□□□□□ -1.8
HLA-DOAP06340 VN1R104P-201ENST00000505115 1009 ntBASIC3.78□□□□□ -1.8
HLA-DOAP06340 MLLT10P2-201ENST00000506434 249 ntBASIC3.78□□□□□ -1.8
HLA-DOAP06340 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.78□□□□□ -1.8
HLA-DOAP06340 ERHP1-201ENST00000523006 310 ntBASIC3.78□□□□□ -1.8
HLA-DOAP06340 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.78□□□□□ -1.8
HLA-DOAP06340 AP002404.1-201ENST00000532005 451 ntBASIC3.78□□□□□ -1.8
HLA-DOAP06340 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.78□□□□□ -1.8
HLA-DOAP06340 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.78□□□□□ -1.8
HLA-DOAP06340 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.78□□□□□ -1.8
HLA-DOAP06340 AC012119.1-201ENST00000603184 222 ntBASIC3.78□□□□□ -1.8
HLA-DOAP06340 uc_338.25-201ENST00000613756 156 ntBASIC3.78□□□□□ -1.8
HLA-DOAP06340 AC091925.1-201ENST00000623204 462 ntBASIC3.78□□□□□ -1.8
HLA-DOAP06340 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.78□□□□□ -1.8
HLA-DOAP06340 MTND5P10-201ENST00000603719 1809 ntBASIC3.78□□□□□ -1.8
HLA-DOAP06340 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
HLA-DOAP06340 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
HLA-DOAP06340 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms