Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 AC068050.1-201ENST00000394891 380 ntBASIC3.06□□□□□ -1.92
ATP2A1O14983 AL139039.1-201ENST00000401900 692 ntBASIC3.06□□□□□ -1.92
ATP2A1O14983 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.06□□□□□ -1.92
ATP2A1O14983 AL031779.1-201ENST00000415663 330 ntBASIC3.06□□□□□ -1.92
ATP2A1O14983 ATG3P1-201ENST00000419507 911 ntBASIC3.06□□□□□ -1.92
ATP2A1O14983 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC3.06□□□□□ -1.92
ATP2A1O14983 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC3.06□□□□□ -1.92
ATP2A1O14983 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC3.06□□□□□ -1.92
ATP2A1O14983 SNRPEP9-201ENST00000436794 238 ntBASIC3.06□□□□□ -1.92
ATP2A1O14983 DPPA3P1-201ENST00000448050 469 ntBASIC3.06□□□□□ -1.92
ATP2A1O14983 CECR9-201ENST00000453421 199 ntBASIC3.06□□□□□ -1.92
ATP2A1O14983 RPS29P15-201ENST00000458329 171 ntBASIC3.06□□□□□ -1.92
ATP2A1O14983 RNU7-63P-201ENST00000459054 62 ntBASIC3.06□□□□□ -1.92
ATP2A1O14983 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC3.06□□□□□ -1.92
ATP2A1O14983 RPS29P12-201ENST00000460178 152 ntBASIC3.06□□□□□ -1.92
ATP2A1O14983 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC3.06□□□□□ -1.92
ATP2A1O14983 RPL23AP11-201ENST00000475260 469 ntBASIC3.06□□□□□ -1.92
ATP2A1O14983 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.06□□□□□ -1.92
ATP2A1O14983 AC109927.2-201ENST00000506416 303 ntBASIC3.06□□□□□ -1.92
ATP2A1O14983 RBBP4P6-201ENST00000508098 202 ntBASIC3.06□□□□□ -1.92
ATP2A1O14983 AC009646.1-201ENST00000510455 318 ntBASIC3.06□□□□□ -1.92
ATP2A1O14983 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.06□□□□□ -1.92
ATP2A1O14983 AC105417.1-201ENST00000514691 285 ntBASIC3.06□□□□□ -1.92
ATP2A1O14983 RNU6-56P-201ENST00000516986 93 ntBASIC3.06□□□□□ -1.92
ATP2A1O14983 RNA5SP503-201ENST00000517047 117 ntBASIC3.06□□□□□ -1.92
ATP2A1O14983 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC3.06□□□□□ -1.92
ATP2A1O14983 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.06□□□□□ -1.92
ATP2A1O14983 NUTF2P8-201ENST00000604593 363 ntBASIC3.06□□□□□ -1.92
ATP2A1O14983 AC004805.2-201ENST00000605382 482 ntBASIC3.06□□□□□ -1.92
ATP2A1O14983 MIR15A-201ENST00000607334 83 ntBASIC3.06□□□□□ -1.92
ATP2A1O14983 AF250324.2-201ENST00000608299 610 ntBASIC3.06□□□□□ -1.92
ATP2A1O14983 AL512643.1-201ENST00000635735 524 ntBASIC3.06□□□□□ -1.92
ATP2A1O14983 Z99571.1-201ENST00000636677 394 ntBASIC3.06□□□□□ -1.92
ATP2A1O14983 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
ATP2A1O14983 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
ATP2A1O14983 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.05□□□□□ -1.92
ATP2A1O14983 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC3.05□□□□□ -1.92
ATP2A1O14983 OR4G2P-201ENST00000328113 903 ntBASIC3.05□□□□□ -1.92
ATP2A1O14983 RNU6-1322P-201ENST00000364309 107 ntBASIC3.05□□□□□ -1.92
ATP2A1O14983 Y_RNA.409-201ENST00000383990 98 ntBASIC3.05□□□□□ -1.92
ATP2A1O14983 RNU6-1029P-201ENST00000384109 107 ntBASIC3.05□□□□□ -1.92
ATP2A1O14983 MIR181A2-201ENST00000384863 110 ntBASIC3.05□□□□□ -1.92
ATP2A1O14983 MIR301A-201ENST00000385261 86 ntBASIC3.05□□□□□ -1.92
ATP2A1O14983 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
ATP2A1O14983 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
ATP2A1O14983 RNU2-68P-201ENST00000410878 191 ntBASIC3.05□□□□□ -1.92
ATP2A1O14983 Y_RNA.619-201ENST00000410951 90 ntBASIC3.05□□□□□ -1.92
ATP2A1O14983 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.05□□□□□ -1.92
ATP2A1O14983 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
ATP2A1O14983 MTCYBP5-201ENST00000423752 1135 ntBASIC3.05□□□□□ -1.92
ATP2A1O14983 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC3.05□□□□□ -1.92
ATP2A1O14983 AC093151.1-201ENST00000427711 313 ntBASIC3.05□□□□□ -1.92
ATP2A1O14983 AC104332.2-201ENST00000429959 156 ntBASIC3.05□□□□□ -1.92
ATP2A1O14983 RPL36AP53-201ENST00000432891 316 ntBASIC3.05□□□□□ -1.92
ATP2A1O14983 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.05□□□□□ -1.92
ATP2A1O14983 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.05□□□□□ -1.92
ATP2A1O14983 RPL32P28-201ENST00000443577 397 ntBASIC3.05□□□□□ -1.92
ATP2A1O14983 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC3.05□□□□□ -1.92
ATP2A1O14983 AC010099.1-201ENST00000455434 375 ntBASIC3.05□□□□□ -1.92
ATP2A1O14983 AC006512.1-201ENST00000468816 291 ntBASIC3.05□□□□□ -1.92
ATP2A1O14983 AC126182.1-201ENST00000478134 357 ntBASIC3.05□□□□□ -1.92
ATP2A1O14983 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC3.05□□□□□ -1.92
ATP2A1O14983 RPS15AP34-201ENST00000487776 387 ntBASIC3.05□□□□□ -1.92
ATP2A1O14983 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC3.05□□□□□ -1.92
ATP2A1O14983 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.05□□□□□ -1.92
ATP2A1O14983 AC104806.1-201ENST00000508720 308 ntBASIC3.05□□□□□ -1.92
ATP2A1O14983 SNORA9.3-201ENST00000516383 129 ntBASIC3.05□□□□□ -1.92
ATP2A1O14983 RNA5SP148-201ENST00000516527 94 ntBASIC3.05□□□□□ -1.92
ATP2A1O14983 RNA5SP165-201ENST00000517142 115 ntBASIC3.05□□□□□ -1.92
ATP2A1O14983 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.05□□□□□ -1.92
ATP2A1O14983 AP003122.3-201ENST00000526316 255 ntBASIC3.05□□□□□ -1.92
ATP2A1O14983 AC084851.1-201ENST00000529105 249 ntBASIC3.05□□□□□ -1.92
ATP2A1O14983 AC104383.1-201ENST00000530297 370 ntBASIC3.05□□□□□ -1.92
ATP2A1O14983 AP000867.2-201ENST00000532468 320 ntBASIC3.05□□□□□ -1.92
ATP2A1O14983 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC3.05□□□□□ -1.92
ATP2A1O14983 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC3.05□□□□□ -1.92
ATP2A1O14983 HMGB1P33-201ENST00000563485 527 ntBASIC3.05□□□□□ -1.92
ATP2A1O14983 MIR4435-1-201ENST00000582552 80 ntBASIC3.05□□□□□ -1.92
ATP2A1O14983 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.05□□□□□ -1.92
ATP2A1O14983 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC3.05□□□□□ -1.92
ATP2A1O14983 AL158032.1-201ENST00000605401 106 ntBASIC3.05□□□□□ -1.92
ATP2A1O14983 AC073308.1-201ENST00000623696 305 ntBASIC3.05□□□□□ -1.92
ATP2A1O14983 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.05□□□□□ -1.92
ATP2A1O14983 AC068137.3-201ENST00000639191 341 ntBASIC3.05□□□□□ -1.92
ATP2A1O14983 ATM-228ENST00000639240 498 ntTSL 5 BASIC3.05□□□□□ -1.92
ATP2A1O14983 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.05□□□□□ -1.92
ATP2A1O14983 AC073869.6-201ENST00000640656 341 ntBASIC3.05□□□□□ -1.92
ATP2A1O14983 AC010680.1-201ENST00000590024 3590 ntBASIC3.04□□□□□ -1.92
ATP2A1O14983 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
ATP2A1O14983 RPL9P7-201ENST00000330965 580 ntBASIC3.04□□□□□ -1.92
ATP2A1O14983 RNU6-1158P-201ENST00000391167 107 ntBASIC3.04□□□□□ -1.92
ATP2A1O14983 CISD1P1-201ENST00000393907 327 ntBASIC3.04□□□□□ -1.92
ATP2A1O14983 MIR888-201ENST00000401186 77 ntBASIC3.04□□□□□ -1.92
ATP2A1O14983 Y_RNA.599-201ENST00000410489 109 ntBASIC3.04□□□□□ -1.92
ATP2A1O14983 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC3.04□□□□□ -1.92
ATP2A1O14983 AL596276.1-201ENST00000434465 418 ntBASIC3.04□□□□□ -1.92
ATP2A1O14983 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.04□□□□□ -1.92
ATP2A1O14983 FDX1P2-201ENST00000450769 375 ntBASIC3.04□□□□□ -1.92
ATP2A1O14983 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC3.04□□□□□ -1.92
ATP2A1O14983 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms