Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 MIR518A2-201ENST00000384966 87 ntBASIC0.67□□□□□ -2.3
RGPD3A6NKT7 RNA5SP299-201ENST00000391203 116 ntBASIC0.67□□□□□ -2.3
RGPD3A6NKT7 DSTNP4-201ENST00000399472 474 ntBASIC0.67□□□□□ -2.3
RGPD3A6NKT7 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC0.67□□□□□ -2.3
RGPD3A6NKT7 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC0.67□□□□□ -2.3
RGPD3A6NKT7 HMGN2P9-201ENST00000476875 229 ntBASIC0.67□□□□□ -2.3
RGPD3A6NKT7 RNU6-1095P-201ENST00000516148 108 ntBASIC0.67□□□□□ -2.3
RGPD3A6NKT7 RNU6-902P-201ENST00000517212 91 ntBASIC0.67□□□□□ -2.3
RGPD3A6NKT7 AC012669.1-201ENST00000603209 283 ntBASIC0.67□□□□□ -2.3
RGPD3A6NKT7 AC013468.1-201ENST00000608680 598 ntBASIC0.67□□□□□ -2.3
RGPD3A6NKT7 AC110792.4-201ENST00000609843 298 ntBASIC0.67□□□□□ -2.3
RGPD3A6NKT7 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC0.67□□□□□ -2.3
RGPD3A6NKT7 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC0.67□□□□□ -2.3
RGPD3A6NKT7 Z99571.1-201ENST00000636677 394 ntBASIC0.67□□□□□ -2.3
RGPD3A6NKT7 AL049641.1-201ENST00000441055 1948 ntBASIC0.67□□□□□ -2.3
RGPD3A6NKT7 RNU6-98P-201ENST00000384173 107 ntBASIC0.66□□□□□ -2.3
RGPD3A6NKT7 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC0.66□□□□□ -2.3
RGPD3A6NKT7 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC0.66□□□□□ -2.3
RGPD3A6NKT7 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC0.66□□□□□ -2.3
RGPD3A6NKT7 RNU4ATAC10P-201ENST00000516967 122 ntBASIC0.66□□□□□ -2.3
RGPD3A6NKT7 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC0.66□□□□□ -2.3
RGPD3A6NKT7 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC0.66□□□□□ -2.3
RGPD3A6NKT7 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC0.66□□□□□ -2.3
RGPD3A6NKT7 MIR6759-201ENST00000638110 65 ntBASIC0.66□□□□□ -2.3
RGPD3A6NKT7 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC0.66□□□□□ -2.3
RGPD3A6NKT7 SNORD1A-201ENST00000364968 72 ntBASIC0.65□□□□□ -2.3
RGPD3A6NKT7 RNU6-217P-201ENST00000384164 104 ntBASIC0.65□□□□□ -2.3
RGPD3A6NKT7 RNU6-1222P-201ENST00000384615 107 ntBASIC0.65□□□□□ -2.3
RGPD3A6NKT7 MRPS36P1-201ENST00000421291 307 ntBASIC0.65□□□□□ -2.3
RGPD3A6NKT7 DYNLT3P2-201ENST00000442517 295 ntBASIC0.65□□□□□ -2.3
RGPD3A6NKT7 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC0.65□□□□□ -2.3
RGPD3A6NKT7 RNA5SP57-201ENST00000459463 123 ntBASIC0.65□□□□□ -2.3
RGPD3A6NKT7 RPL30P7-201ENST00000479312 323 ntBASIC0.65□□□□□ -2.3
RGPD3A6NKT7 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC0.65□□□□□ -2.3
RGPD3A6NKT7 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC0.65□□□□□ -2.3
RGPD3A6NKT7 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC0.65□□□□□ -2.3
RGPD3A6NKT7 uc_338.14-201ENST00000613162 166 ntBASIC0.65□□□□□ -2.3
RGPD3A6NKT7 AL391597.1-201ENST00000618707 694 ntBASIC0.65□□□□□ -2.3
RGPD3A6NKT7 MTND5P11-201ENST00000511037 1812 ntBASIC0.65□□□□□ -2.3
RGPD3A6NKT7 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC0.65□□□□□ -2.31
RGPD3A6NKT7 RNU6-418P-201ENST00000384035 107 ntBASIC0.65□□□□□ -2.31
RGPD3A6NKT7 MIR92A1-201ENST00000385233 78 ntBASIC0.65□□□□□ -2.31
RGPD3A6NKT7 AC019070.1-201ENST00000415008 1024 ntBASIC0.65□□□□□ -2.31
RGPD3A6NKT7 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC0.65□□□□□ -2.31
RGPD3A6NKT7 AL049734.2-201ENST00000441066 616 ntBASIC0.65□□□□□ -2.31
RGPD3A6NKT7 AC111000.5-201ENST00000506559 1178 ntBASIC0.65□□□□□ -2.31
RGPD3A6NKT7 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC0.65□□□□□ -2.31
RGPD3A6NKT7 RAB11AP2-201ENST00000545905 639 ntBASIC0.65□□□□□ -2.31
RGPD3A6NKT7 AL138963.2-201ENST00000605137 226 ntBASIC0.65□□□□□ -2.31
RGPD3A6NKT7 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC0.65□□□□□ -2.31
RGPD3A6NKT7 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC0.65□□□□□ -2.31
RGPD3A6NKT7 AC008498.1-201ENST00000613012 531 ntBASIC0.65□□□□□ -2.31
RGPD3A6NKT7 AC068787.1-201ENST00000623908 691 ntBASIC0.65□□□□□ -2.31
RGPD3A6NKT7 ZNF680P1-201ENST00000436625 1469 ntBASIC0.64□□□□□ -2.31
RGPD3A6NKT7 SNORA63.3-201ENST00000362682 132 ntBASIC0.64□□□□□ -2.31
RGPD3A6NKT7 RNU2-70P-201ENST00000410718 179 ntBASIC0.64□□□□□ -2.31
RGPD3A6NKT7 VN1R42P-201ENST00000424651 344 ntBASIC0.64□□□□□ -2.31
RGPD3A6NKT7 TAAR7P-201ENST00000436141 242 ntBASIC0.64□□□□□ -2.31
RGPD3A6NKT7 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC0.64□□□□□ -2.31
RGPD3A6NKT7 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC0.64□□□□□ -2.31
RGPD3A6NKT7 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC0.64□□□□□ -2.31
RGPD3A6NKT7 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
RGPD3A6NKT7 AC138853.1-201ENST00000503549 823 ntBASIC0.64□□□□□ -2.31
RGPD3A6NKT7 AP000403.1-201ENST00000603349 851 ntBASIC0.64□□□□□ -2.31
RGPD3A6NKT7 AC012676.2-201ENST00000619258 186 ntBASIC0.64□□□□□ -2.31
RGPD3A6NKT7 RNU6-452P-201ENST00000384406 107 ntBASIC0.63□□□□□ -2.31
RGPD3A6NKT7 Y_RNA.518-201ENST00000384552 113 ntBASIC0.63□□□□□ -2.31
RGPD3A6NKT7 RNU11-3P-201ENST00000391111 133 ntBASIC0.63□□□□□ -2.31
RGPD3A6NKT7 AL160275.3-201ENST00000423876 471 ntBASIC0.63□□□□□ -2.31
RGPD3A6NKT7 AC073614.1-201ENST00000438690 650 ntBASIC0.63□□□□□ -2.31
RGPD3A6NKT7 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC0.63□□□□□ -2.31
RGPD3A6NKT7 RPL9P9-202ENST00000466501 579 ntBASIC0.63□□□□□ -2.31
RGPD3A6NKT7 HMGB1P36-201ENST00000487709 576 ntBASIC0.63□□□□□ -2.31
RGPD3A6NKT7 SNORD116-28-201ENST00000516123 91 ntBASIC0.63□□□□□ -2.31
RGPD3A6NKT7 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC0.63□□□□□ -2.31
RGPD3A6NKT7 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC0.63□□□□□ -2.31
RGPD3A6NKT7 MIR4653-201ENST00000585107 83 ntBASIC0.63□□□□□ -2.31
RGPD3A6NKT7 RNU1-124P-201ENST00000363861 145 ntBASIC0.62□□□□□ -2.31
RGPD3A6NKT7 MIR1290-201ENST00000408735 78 ntBASIC0.62□□□□□ -2.31
RGPD3A6NKT7 EIF4EP2-201ENST00000422816 654 ntBASIC0.62□□□□□ -2.31
RGPD3A6NKT7 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC0.62□□□□□ -2.31
RGPD3A6NKT7 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC0.62□□□□□ -2.31
RGPD3A6NKT7 RPL7P29-201ENST00000437151 728 ntBASIC0.62□□□□□ -2.31
RGPD3A6NKT7 AL135790.2-201ENST00000437701 267 ntBASIC0.62□□□□□ -2.31
RGPD3A6NKT7 KATNBL1P6-201ENST00000453433 915 ntBASIC0.62□□□□□ -2.31
RGPD3A6NKT7 AL049714.1-201ENST00000466686 347 ntBASIC0.62□□□□□ -2.31
RGPD3A6NKT7 SSR3-208ENST00000496050 579 ntTSL 4 BASIC0.62□□□□□ -2.31
RGPD3A6NKT7 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC0.62□□□□□ -2.31
RGPD3A6NKT7 AC093677.1-201ENST00000514414 678 ntBASIC0.62□□□□□ -2.31
RGPD3A6NKT7 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC0.62□□□□□ -2.31
RGPD3A6NKT7 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC0.62□□□□□ -2.31
RGPD3A6NKT7 AC004817.2-201ENST00000561794 651 ntBASIC0.62□□□□□ -2.31
RGPD3A6NKT7 MIR4765-201ENST00000585007 77 ntBASIC0.62□□□□□ -2.31
RGPD3A6NKT7 AC092953.2-201ENST00000608000 699 ntBASIC0.62□□□□□ -2.31
RGPD3A6NKT7 AC006213.4-201ENST00000616184 634 ntBASIC0.62□□□□□ -2.31
RGPD3A6NKT7 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.62□□□□□ -2.31
RGPD3A6NKT7 MIR218-1-201ENST00000384999 110 ntBASIC0.62□□□□□ -2.31
RGPD3A6NKT7 MIR1303-201ENST00000408625 86 ntBASIC0.62□□□□□ -2.31
RGPD3A6NKT7 AL606490.4-201ENST00000423117 127 ntBASIC0.62□□□□□ -2.31
RGPD3A6NKT7 AC024082.2-201ENST00000434771 238 ntBASIC0.62□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 117.5 ms