Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 RNU5E-7P-201ENST00000365290 117 ntBASIC3.1□□□□□ -1.91
LIN7CQ9NUP9 RNU6-213P-201ENST00000384051 104 ntBASIC3.1□□□□□ -1.91
LIN7CQ9NUP9 RNU6-214P-201ENST00000384130 107 ntBASIC3.1□□□□□ -1.91
LIN7CQ9NUP9 MIR767-201ENST00000390228 109 ntBASIC3.1□□□□□ -1.91
LIN7CQ9NUP9 RNA5SP354-201ENST00000391247 136 ntBASIC3.1□□□□□ -1.91
LIN7CQ9NUP9 SNORA57.3-201ENST00000411095 141 ntBASIC3.1□□□□□ -1.91
LIN7CQ9NUP9 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.1□□□□□ -1.91
LIN7CQ9NUP9 AC002075.2-201ENST00000425207 252 ntBASIC3.1□□□□□ -1.91
LIN7CQ9NUP9 AC006989.1-201ENST00000427212 131 ntBASIC3.1□□□□□ -1.91
LIN7CQ9NUP9 RPL7P2-201ENST00000427639 268 ntBASIC3.1□□□□□ -1.91
LIN7CQ9NUP9 RPL21P40-201ENST00000428586 483 ntBASIC3.1□□□□□ -1.91
LIN7CQ9NUP9 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC3.1□□□□□ -1.91
LIN7CQ9NUP9 AL365400.1-201ENST00000431854 640 ntBASIC3.1□□□□□ -1.91
LIN7CQ9NUP9 RPS29P31-201ENST00000446147 164 ntBASIC3.1□□□□□ -1.91
LIN7CQ9NUP9 NIPA2P5-201ENST00000452282 464 ntBASIC3.1□□□□□ -1.91
LIN7CQ9NUP9 RPS27P26-201ENST00000494583 239 ntBASIC3.1□□□□□ -1.91
LIN7CQ9NUP9 AC103851.1-201ENST00000506833 274 ntBASIC3.1□□□□□ -1.91
LIN7CQ9NUP9 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC3.1□□□□□ -1.91
LIN7CQ9NUP9 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.1□□□□□ -1.91
LIN7CQ9NUP9 AC092436.3-201ENST00000511788 257 ntBASIC3.1□□□□□ -1.91
LIN7CQ9NUP9 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.1□□□□□ -1.91
LIN7CQ9NUP9 RNA5SP208-201ENST00000516156 78 ntBASIC3.1□□□□□ -1.91
LIN7CQ9NUP9 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC3.1□□□□□ -1.91
LIN7CQ9NUP9 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC3.1□□□□□ -1.91
LIN7CQ9NUP9 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.1□□□□□ -1.91
LIN7CQ9NUP9 UBE2Q2P8-201ENST00000560644 102 ntBASIC3.1□□□□□ -1.91
LIN7CQ9NUP9 AC005668.1-201ENST00000571142 476 ntBASIC3.1□□□□□ -1.91
LIN7CQ9NUP9 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.1□□□□□ -1.91
LIN7CQ9NUP9 AL138726.1-201ENST00000614873 333 ntBASIC3.1□□□□□ -1.91
LIN7CQ9NUP9 Y_RNA.804-201ENST00000615262 101 ntBASIC3.1□□□□□ -1.91
LIN7CQ9NUP9 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.1□□□□□ -1.91
LIN7CQ9NUP9 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.1□□□□□ -1.91
LIN7CQ9NUP9 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
LIN7CQ9NUP9 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.1□□□□□ -1.91
LIN7CQ9NUP9 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.09□□□□□ -1.91
LIN7CQ9NUP9 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
LIN7CQ9NUP9 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
LIN7CQ9NUP9 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
LIN7CQ9NUP9 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.91
LIN7CQ9NUP9 RNU6-942P-201ENST00000363002 107 ntBASIC3.09□□□□□ -1.91
LIN7CQ9NUP9 Y_RNA.142-201ENST00000363491 102 ntBASIC3.09□□□□□ -1.91
LIN7CQ9NUP9 Y_RNA.212-201ENST00000364177 102 ntBASIC3.09□□□□□ -1.91
LIN7CQ9NUP9 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
LIN7CQ9NUP9 RNU6-128P-201ENST00000383976 107 ntBASIC3.09□□□□□ -1.91
LIN7CQ9NUP9 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
LIN7CQ9NUP9 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
LIN7CQ9NUP9 RNA5SP424-201ENST00000390988 115 ntBASIC3.09□□□□□ -1.91
LIN7CQ9NUP9 RNU6-1009P-201ENST00000390996 107 ntBASIC3.09□□□□□ -1.91
LIN7CQ9NUP9 AL391417.1-201ENST00000404100 426 ntBASIC3.09□□□□□ -1.91
LIN7CQ9NUP9 AL356967.1-201ENST00000406305 431 ntBASIC3.09□□□□□ -1.91
LIN7CQ9NUP9 FTH1P15-201ENST00000406984 280 ntBASIC3.09□□□□□ -1.91
LIN7CQ9NUP9 AC009414.1-201ENST00000427200 443 ntBASIC3.09□□□□□ -1.91
LIN7CQ9NUP9 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.09□□□□□ -1.91
LIN7CQ9NUP9 RPL32P28-201ENST00000443577 397 ntBASIC3.09□□□□□ -1.91
LIN7CQ9NUP9 MRPL50P4-201ENST00000446432 475 ntBASIC3.09□□□□□ -1.91
LIN7CQ9NUP9 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC3.09□□□□□ -1.91
LIN7CQ9NUP9 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC3.09□□□□□ -1.91
LIN7CQ9NUP9 AC026784.1-201ENST00000507986 352 ntBASIC3.09□□□□□ -1.91
LIN7CQ9NUP9 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.09□□□□□ -1.91
LIN7CQ9NUP9 RAC1P2-201ENST00000511164 579 ntBASIC3.09□□□□□ -1.91
LIN7CQ9NUP9 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC3.09□□□□□ -1.91
LIN7CQ9NUP9 AC104576.1-201ENST00000524225 88 ntBASIC3.09□□□□□ -1.91
LIN7CQ9NUP9 AC026371.1-201ENST00000551867 419 ntBASIC3.09□□□□□ -1.91
LIN7CQ9NUP9 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.09□□□□□ -1.91
LIN7CQ9NUP9 AC091135.1-201ENST00000585943 307 ntBASIC3.09□□□□□ -1.91
LIN7CQ9NUP9 AC023043.2-201ENST00000589678 1026 ntBASIC3.09□□□□□ -1.91
LIN7CQ9NUP9 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.09□□□□□ -1.91
LIN7CQ9NUP9 AL355877.2-201ENST00000603670 358 ntBASIC3.09□□□□□ -1.91
LIN7CQ9NUP9 AL670379.10-201ENST00000604330 253 ntBASIC3.09□□□□□ -1.91
LIN7CQ9NUP9 ELOCP5-201ENST00000604924 333 ntBASIC3.09□□□□□ -1.91
LIN7CQ9NUP9 AL670379.9-201ENST00000605428 253 ntBASIC3.09□□□□□ -1.91
LIN7CQ9NUP9 AL022345.1-201ENST00000607292 135 ntBASIC3.09□□□□□ -1.91
LIN7CQ9NUP9 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC3.09□□□□□ -1.91
LIN7CQ9NUP9 uc_338.5-201ENST00000611839 155 ntBASIC3.09□□□□□ -1.91
LIN7CQ9NUP9 AC110079.1-202ENST00000635213 138 ntBASIC3.09□□□□□ -1.91
LIN7CQ9NUP9 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
LIN7CQ9NUP9 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
LIN7CQ9NUP9 AC010889.1-201ENST00000566193 2666 ntBASIC3.09□□□□□ -1.91
LIN7CQ9NUP9 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
LIN7CQ9NUP9 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
LIN7CQ9NUP9 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC3.08□□□□□ -1.92
LIN7CQ9NUP9 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
LIN7CQ9NUP9 TNPO1P3-201ENST00000436471 2662 ntBASIC3.08□□□□□ -1.92
LIN7CQ9NUP9 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
LIN7CQ9NUP9 AC091564.4-201ENST00000533934 2194 ntBASIC3.08□□□□□ -1.92
LIN7CQ9NUP9 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.08□□□□□ -1.92
LIN7CQ9NUP9 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
LIN7CQ9NUP9 RNU6-858P-201ENST00000362436 107 ntBASIC3.08□□□□□ -1.92
LIN7CQ9NUP9 RNU6-78P-201ENST00000362897 107 ntBASIC3.08□□□□□ -1.92
LIN7CQ9NUP9 Y_RNA.184-201ENST00000363884 108 ntBASIC3.08□□□□□ -1.92
LIN7CQ9NUP9 RNA5SP515-201ENST00000364570 118 ntBASIC3.08□□□□□ -1.92
LIN7CQ9NUP9 RNU6-1329P-201ENST00000365664 107 ntBASIC3.08□□□□□ -1.92
LIN7CQ9NUP9 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.08□□□□□ -1.92
LIN7CQ9NUP9 SNORD116-11-201ENST00000383882 92 ntBASIC3.08□□□□□ -1.92
LIN7CQ9NUP9 RNU6-750P-201ENST00000390946 107 ntBASIC3.08□□□□□ -1.92
LIN7CQ9NUP9 AL445529.1-201ENST00000398713 389 ntBASIC3.08□□□□□ -1.92
LIN7CQ9NUP9 AL122016.1-201ENST00000403365 367 ntBASIC3.08□□□□□ -1.92
LIN7CQ9NUP9 AL356432.1-201ENST00000405809 419 ntBASIC3.08□□□□□ -1.92
LIN7CQ9NUP9 SNORA3.3-201ENST00000408712 125 ntBASIC3.08□□□□□ -1.92
LIN7CQ9NUP9 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms