Protein–RNA interactions for Protein: Q96M89

CCDC138, Coiled-coil domain-containing protein 138, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC138Q96M89 RPS29P25-201ENST00000481709 171 ntBASIC3.44□□□□□ -1.86
CCDC138Q96M89 Y_RNA.654-201ENST00000497848 106 ntBASIC3.44□□□□□ -1.86
CCDC138Q96M89 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.44□□□□□ -1.86
CCDC138Q96M89 RNU6-189P-201ENST00000516120 101 ntBASIC3.44□□□□□ -1.86
CCDC138Q96M89 RNU6-1038P-201ENST00000516516 104 ntBASIC3.44□□□□□ -1.86
CCDC138Q96M89 SNORD19.2-201ENST00000516978 73 ntBASIC3.44□□□□□ -1.86
CCDC138Q96M89 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC3.44□□□□□ -1.86
CCDC138Q96M89 AC026333.2-201ENST00000542164 106 ntBASIC3.44□□□□□ -1.86
CCDC138Q96M89 AC078814.3-201ENST00000553036 491 ntBASIC3.44□□□□□ -1.86
CCDC138Q96M89 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC3.44□□□□□ -1.86
CCDC138Q96M89 AL355877.2-201ENST00000603670 358 ntBASIC3.44□□□□□ -1.86
CCDC138Q96M89 RMST_3.1-201ENST00000611651 109 ntBASIC3.44□□□□□ -1.86
CCDC138Q96M89 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC3.44□□□□□ -1.86
CCDC138Q96M89 MIR3662-201ENST00000637030 95 ntBASIC3.44□□□□□ -1.86
CCDC138Q96M89 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.44□□□□□ -1.86
CCDC138Q96M89 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CCDC138Q96M89 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
CCDC138Q96M89 AC099654.7-201ENST00000635788 2127 ntBASIC3.43□□□□□ -1.86
CCDC138Q96M89 Y_RNA.324-201ENST00000365165 102 ntBASIC3.43□□□□□ -1.86
CCDC138Q96M89 Y_RNA.378-201ENST00000365652 113 ntBASIC3.43□□□□□ -1.86
CCDC138Q96M89 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CCDC138Q96M89 AP002088.1-201ENST00000382740 395 ntBASIC3.43□□□□□ -1.86
CCDC138Q96M89 RNA5SP219-201ENST00000390940 113 ntBASIC3.43□□□□□ -1.86
CCDC138Q96M89 U3.37-201ENST00000408528 213 ntBASIC3.43□□□□□ -1.86
CCDC138Q96M89 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.43□□□□□ -1.86
CCDC138Q96M89 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC3.43□□□□□ -1.86
CCDC138Q96M89 AC016831.2-201ENST00000417179 352 ntBASIC3.43□□□□□ -1.86
CCDC138Q96M89 CYCSP4-201ENST00000429682 331 ntBASIC3.43□□□□□ -1.86
CCDC138Q96M89 BX679664.1-201ENST00000434429 253 ntBASIC3.43□□□□□ -1.86
CCDC138Q96M89 AL161651.1-201ENST00000440882 223 ntBASIC3.43□□□□□ -1.86
CCDC138Q96M89 AL358232.1-201ENST00000448030 501 ntBASIC3.43□□□□□ -1.86
CCDC138Q96M89 AC233279.1-201ENST00000455300 423 ntBASIC3.43□□□□□ -1.86
CCDC138Q96M89 RPS29P12-201ENST00000460178 152 ntBASIC3.43□□□□□ -1.86
CCDC138Q96M89 HIGD1AP13-201ENST00000509878 289 ntBASIC3.43□□□□□ -1.86
CCDC138Q96M89 AC113155.1-201ENST00000511141 769 ntBASIC3.43□□□□□ -1.86
CCDC138Q96M89 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.43□□□□□ -1.86
CCDC138Q96M89 AC090115.3-201ENST00000553218 849 ntBASIC3.43□□□□□ -1.86
CCDC138Q96M89 AL118558.2-201ENST00000556294 238 ntBASIC3.43□□□□□ -1.86
CCDC138Q96M89 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CCDC138Q96M89 AC092807.2-201ENST00000609367 243 ntBASIC3.43□□□□□ -1.86
CCDC138Q96M89 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
CCDC138Q96M89 AC010889.1-201ENST00000566193 2666 ntBASIC3.43□□□□□ -1.86
CCDC138Q96M89 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CCDC138Q96M89 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
CCDC138Q96M89 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.42□□□□□ -1.86
CCDC138Q96M89 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.42□□□□□ -1.86
CCDC138Q96M89 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
CCDC138Q96M89 RNU6-72P-201ENST00000384285 79 ntBASIC3.42□□□□□ -1.86
CCDC138Q96M89 RNU4-26P-201ENST00000410270 107 ntBASIC3.42□□□□□ -1.86
CCDC138Q96M89 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC3.42□□□□□ -1.86
CCDC138Q96M89 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.42□□□□□ -1.86
CCDC138Q96M89 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.42□□□□□ -1.86
CCDC138Q96M89 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC3.42□□□□□ -1.86
CCDC138Q96M89 AL357552.1-201ENST00000445254 415 ntBASIC3.42□□□□□ -1.86
CCDC138Q96M89 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC3.42□□□□□ -1.86
CCDC138Q96M89 AC092001.1-201ENST00000453012 261 ntBASIC3.42□□□□□ -1.86
CCDC138Q96M89 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC3.42□□□□□ -1.86
CCDC138Q96M89 snoU109.2-201ENST00000459316 135 ntBASIC3.42□□□□□ -1.86
CCDC138Q96M89 RNU6-1208P-201ENST00000459588 107 ntBASIC3.42□□□□□ -1.86
CCDC138Q96M89 AC091179.1-201ENST00000461606 579 ntBASIC3.42□□□□□ -1.86
CCDC138Q96M89 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC3.42□□□□□ -1.86
CCDC138Q96M89 AC106707.2-201ENST00000484182 374 ntBASIC3.42□□□□□ -1.86
CCDC138Q96M89 AC116655.1-201ENST00000508324 901 ntBASIC3.42□□□□□ -1.86
CCDC138Q96M89 RNU6-581P-201ENST00000516214 105 ntBASIC3.42□□□□□ -1.86
CCDC138Q96M89 RNA5SP380-201ENST00000517190 98 ntBASIC3.42□□□□□ -1.86
CCDC138Q96M89 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.42□□□□□ -1.86
CCDC138Q96M89 CYCSP27-201ENST00000527643 293 ntBASIC3.42□□□□□ -1.86
CCDC138Q96M89 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.42□□□□□ -1.86
CCDC138Q96M89 AC007151.1-201ENST00000572774 483 ntBASIC3.42□□□□□ -1.86
CCDC138Q96M89 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.42□□□□□ -1.86
CCDC138Q96M89 VN1R80P-201ENST00000597126 338 ntBASIC3.42□□□□□ -1.86
CCDC138Q96M89 AC092747.3-201ENST00000603769 301 ntBASIC3.42□□□□□ -1.86
CCDC138Q96M89 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.42□□□□□ -1.86
CCDC138Q96M89 AL020991.1-201ENST00000612314 373 ntBASIC3.42□□□□□ -1.86
CCDC138Q96M89 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
CCDC138Q96M89 AC103705.1-201ENST00000619013 241 ntBASIC3.42□□□□□ -1.86
CCDC138Q96M89 UCA1.1-201ENST00000620952 75 ntBASIC3.42□□□□□ -1.86
CCDC138Q96M89 AC022149.2-201ENST00000621061 203 ntBASIC3.42□□□□□ -1.86
CCDC138Q96M89 U4.6-201ENST00000621618 127 ntBASIC3.42□□□□□ -1.86
CCDC138Q96M89 SCARNA4-202ENST00000625402 129 ntBASIC3.42□□□□□ -1.86
CCDC138Q96M89 AC009093.8-201ENST00000641769 292 ntBASIC3.42□□□□□ -1.86
CCDC138Q96M89 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.42□□□□□ -1.86
CCDC138Q96M89 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.42□□□□□ -1.86
CCDC138Q96M89 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CCDC138Q96M89 AC004944.1-201ENST00000517807 3059 ntBASIC3.42□□□□□ -1.86
CCDC138Q96M89 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
CCDC138Q96M89 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC3.41□□□□□ -1.86
CCDC138Q96M89 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC3.41□□□□□ -1.86
CCDC138Q96M89 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.41□□□□□ -1.86
CCDC138Q96M89 RNA5SP171-201ENST00000391071 115 ntBASIC3.41□□□□□ -1.86
CCDC138Q96M89 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CCDC138Q96M89 RNA5SP44-201ENST00000410446 133 ntBASIC3.41□□□□□ -1.86
CCDC138Q96M89 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.41□□□□□ -1.86
CCDC138Q96M89 RPLP0P7-201ENST00000416050 667 ntBASIC3.41□□□□□ -1.86
CCDC138Q96M89 AL358075.3-201ENST00000426289 226 ntBASIC3.41□□□□□ -1.86
CCDC138Q96M89 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC3.41□□□□□ -1.86
CCDC138Q96M89 HIGD1AP2-201ENST00000446367 280 ntBASIC3.41□□□□□ -1.86
CCDC138Q96M89 NFU1P2-201ENST00000448700 469 ntBASIC3.41□□□□□ -1.86
CCDC138Q96M89 FCF1P3-201ENST00000496394 590 ntBASIC3.41□□□□□ -1.86
CCDC138Q96M89 AF213884.2-201ENST00000510417 903 ntBASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 116.5 ms