Protein–RNA interactions for Protein: Q8NAV1

PRPF38A, Pre-mRNA-splicing factor 38A, humanhuman

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38AQ8NAV1 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.99□□□□□ -1.77
PRPF38AQ8NAV1 NUTF2P8-201ENST00000604593 363 ntBASIC3.99□□□□□ -1.77
PRPF38AQ8NAV1 YPEL5P2-201ENST00000605553 359 ntBASIC3.99□□□□□ -1.77
PRPF38AQ8NAV1 AL031601.2-202ENST00000622650 282 ntBASIC3.99□□□□□ -1.77
PRPF38AQ8NAV1 DUXAP9-208ENST00000622815 614 ntBASIC3.99□□□□□ -1.77
PRPF38AQ8NAV1 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
PRPF38AQ8NAV1 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
PRPF38AQ8NAV1 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.99□□□□□ -1.77
PRPF38AQ8NAV1 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
PRPF38AQ8NAV1 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
PRPF38AQ8NAV1 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
PRPF38AQ8NAV1 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
PRPF38AQ8NAV1 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
PRPF38AQ8NAV1 AL356274.2-201ENST00000624379 3752 ntBASIC3.98□□□□□ -1.77
PRPF38AQ8NAV1 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
PRPF38AQ8NAV1 Y_RNA.378-201ENST00000365652 113 ntBASIC3.98□□□□□ -1.77
PRPF38AQ8NAV1 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
PRPF38AQ8NAV1 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
PRPF38AQ8NAV1 EIF4E2P1-201ENST00000393781 255 ntBASIC3.98□□□□□ -1.77
PRPF38AQ8NAV1 AL356057.2-201ENST00000403318 432 ntBASIC3.98□□□□□ -1.77
PRPF38AQ8NAV1 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC3.98□□□□□ -1.77
PRPF38AQ8NAV1 RPL30P16-201ENST00000419341 429 ntBASIC3.98□□□□□ -1.77
PRPF38AQ8NAV1 AL513185.2-201ENST00000425543 193 ntBASIC3.98□□□□□ -1.77
PRPF38AQ8NAV1 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.98□□□□□ -1.77
PRPF38AQ8NAV1 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC3.98□□□□□ -1.77
PRPF38AQ8NAV1 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.98□□□□□ -1.77
PRPF38AQ8NAV1 MRPS31P2-201ENST00000451581 518 ntBASIC3.98□□□□□ -1.77
PRPF38AQ8NAV1 MTND3P25-201ENST00000509243 135 ntBASIC3.98□□□□□ -1.77
PRPF38AQ8NAV1 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC3.98□□□□□ -1.77
PRPF38AQ8NAV1 AC090115.3-201ENST00000553218 849 ntBASIC3.98□□□□□ -1.77
PRPF38AQ8NAV1 MIR4738-201ENST00000579134 87 ntBASIC3.98□□□□□ -1.77
PRPF38AQ8NAV1 AC018638.8-201ENST00000588755 281 ntBASIC3.98□□□□□ -1.77
PRPF38AQ8NAV1 VN1R80P-201ENST00000597126 338 ntBASIC3.98□□□□□ -1.77
PRPF38AQ8NAV1 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.98□□□□□ -1.77
PRPF38AQ8NAV1 AL035413.2-201ENST00000604801 525 ntBASIC3.98□□□□□ -1.77
PRPF38AQ8NAV1 AC093913.1-201ENST00000614178 329 ntBASIC3.98□□□□□ -1.77
PRPF38AQ8NAV1 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.98□□□□□ -1.77
PRPF38AQ8NAV1 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.98□□□□□ -1.77
PRPF38AQ8NAV1 AC100810.6-201ENST00000638068 285 ntBASIC3.98□□□□□ -1.77
PRPF38AQ8NAV1 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC3.98□□□□□ -1.77
PRPF38AQ8NAV1 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
PRPF38AQ8NAV1 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
PRPF38AQ8NAV1 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
PRPF38AQ8NAV1 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
PRPF38AQ8NAV1 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.97□□□□□ -1.77
PRPF38AQ8NAV1 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
PRPF38AQ8NAV1 SNORD3E-201ENST00000362899 217 ntBASIC3.97□□□□□ -1.77
PRPF38AQ8NAV1 Y_RNA.86-201ENST00000363020 111 ntBASIC3.97□□□□□ -1.77
PRPF38AQ8NAV1 RNU6-522P-201ENST00000364497 107 ntBASIC3.97□□□□□ -1.77
PRPF38AQ8NAV1 RNU6-166P-201ENST00000384371 107 ntBASIC3.97□□□□□ -1.77
PRPF38AQ8NAV1 Y_RNA.530-201ENST00000384587 101 ntBASIC3.97□□□□□ -1.77
PRPF38AQ8NAV1 MT-TL1-201ENST00000386347 75 ntBASIC3.97□□□□□ -1.77
PRPF38AQ8NAV1 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC3.97□□□□□ -1.77
PRPF38AQ8NAV1 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC3.97□□□□□ -1.77
PRPF38AQ8NAV1 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.97□□□□□ -1.77
PRPF38AQ8NAV1 AL590639.1-201ENST00000456484 337 ntBASIC3.97□□□□□ -1.77
PRPF38AQ8NAV1 AC104472.2-201ENST00000469035 601 ntBASIC3.97□□□□□ -1.77
PRPF38AQ8NAV1 AP000852.1-201ENST00000472460 573 ntBASIC3.97□□□□□ -1.77
PRPF38AQ8NAV1 AC011005.2-201ENST00000487324 359 ntBASIC3.97□□□□□ -1.77
PRPF38AQ8NAV1 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.97□□□□□ -1.77
PRPF38AQ8NAV1 RNU6-1038P-201ENST00000516516 104 ntBASIC3.97□□□□□ -1.77
PRPF38AQ8NAV1 RNU6-1183P-201ENST00000517054 60 ntBASIC3.97□□□□□ -1.77
PRPF38AQ8NAV1 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.97□□□□□ -1.77
PRPF38AQ8NAV1 AL118558.2-201ENST00000556294 238 ntBASIC3.97□□□□□ -1.77
PRPF38AQ8NAV1 LINC00933-203ENST00000559812 219 ntBASIC3.97□□□□□ -1.77
PRPF38AQ8NAV1 MIR548S-201ENST00000581352 82 ntBASIC3.97□□□□□ -1.77
PRPF38AQ8NAV1 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC3.97□□□□□ -1.77
PRPF38AQ8NAV1 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.97□□□□□ -1.77
PRPF38AQ8NAV1 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
PRPF38AQ8NAV1 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.97□□□□□ -1.77
PRPF38AQ8NAV1 AC110491.1-201ENST00000562191 2010 ntBASIC3.97□□□□□ -1.77
PRPF38AQ8NAV1 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
PRPF38AQ8NAV1 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.96□□□□□ -1.78
PRPF38AQ8NAV1 Y_RNA.88-201ENST00000363029 99 ntBASIC3.96□□□□□ -1.78
PRPF38AQ8NAV1 SNORA38.1-201ENST00000364172 131 ntBASIC3.96□□□□□ -1.78
PRPF38AQ8NAV1 U3.12-201ENST00000364498 214 ntBASIC3.96□□□□□ -1.78
PRPF38AQ8NAV1 Y_RNA.373-201ENST00000365600 103 ntBASIC3.96□□□□□ -1.78
PRPF38AQ8NAV1 CD24P4-201ENST00000382840 243 ntBASIC3.96□□□□□ -1.78
PRPF38AQ8NAV1 AL162578.1-201ENST00000406202 378 ntBASIC3.96□□□□□ -1.78
PRPF38AQ8NAV1 RAP1BP3-201ENST00000407180 549 ntBASIC3.96□□□□□ -1.78
PRPF38AQ8NAV1 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.96□□□□□ -1.78
PRPF38AQ8NAV1 Y_RNA.615-201ENST00000410769 117 ntBASIC3.96□□□□□ -1.78
PRPF38AQ8NAV1 BPY2DP-201ENST00000422208 265 ntBASIC3.96□□□□□ -1.78
PRPF38AQ8NAV1 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.96□□□□□ -1.78
PRPF38AQ8NAV1 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC3.96□□□□□ -1.78
PRPF38AQ8NAV1 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.96□□□□□ -1.78
PRPF38AQ8NAV1 RPL21P93-201ENST00000480465 489 ntBASIC3.96□□□□□ -1.78
PRPF38AQ8NAV1 TRBVA-201ENST00000498804 316 ntBASIC3.96□□□□□ -1.78
PRPF38AQ8NAV1 SNORA14.1-201ENST00000516113 141 ntBASIC3.96□□□□□ -1.78
PRPF38AQ8NAV1 Y_RNA.665-201ENST00000516177 98 ntBASIC3.96□□□□□ -1.78
PRPF38AQ8NAV1 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.96□□□□□ -1.78
PRPF38AQ8NAV1 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.96□□□□□ -1.78
PRPF38AQ8NAV1 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.96□□□□□ -1.78
PRPF38AQ8NAV1 AC026333.2-201ENST00000542164 106 ntBASIC3.96□□□□□ -1.78
PRPF38AQ8NAV1 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.96□□□□□ -1.78
PRPF38AQ8NAV1 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.96□□□□□ -1.78
PRPF38AQ8NAV1 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC3.96□□□□□ -1.78
PRPF38AQ8NAV1 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.96□□□□□ -1.78
PRPF38AQ8NAV1 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.96□□□□□ -1.78
PRPF38AQ8NAV1 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms