Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 RNU4-78P-201ENST00000410940 126 ntBASIC0.06□□□□□ -2.4
VPS13CQ709C8 AC074198.2-201ENST00000508153 258 ntBASIC0.06□□□□□ -2.4
VPS13CQ709C8 RNU6-567P-201ENST00000516746 107 ntBASIC0.06□□□□□ -2.4
VPS13CQ709C8 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC0.06□□□□□ -2.4
VPS13CQ709C8 RNU6-348P-201ENST00000384386 107 ntBASIC0.05□□□□□ -2.4
VPS13CQ709C8 MTND4LP11-201ENST00000422184 280 ntBASIC0.05□□□□□ -2.4
VPS13CQ709C8 AC004383.1-201ENST00000438135 289 ntBASIC0.05□□□□□ -2.4
VPS13CQ709C8 AL589880.1-201ENST00000448271 287 ntBASIC0.05□□□□□ -2.4
VPS13CQ709C8 RNA5SP165-201ENST00000517142 115 ntBASIC0.05□□□□□ -2.4
VPS13CQ709C8 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC0.05□□□□□ -2.4
VPS13CQ709C8 AC115085.1-201ENST00000588924 229 ntBASIC0.05□□□□□ -2.4
VPS13CQ709C8 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC0.05□□□□□ -2.4
VPS13CQ709C8 uc_338.17-201ENST00000619633 179 ntBASIC0.05□□□□□ -2.4
VPS13CQ709C8 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC0.05□□□□□ -2.4
VPS13CQ709C8 SNORD114-3-201ENST00000364969 75 ntBASIC0.05□□□□□ -2.4
VPS13CQ709C8 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC0.05□□□□□ -2.4
VPS13CQ709C8 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC0.05□□□□□ -2.4
VPS13CQ709C8 AC069277.2-201ENST00000454211 432 ntBASIC0.05□□□□□ -2.4
VPS13CQ709C8 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.05□□□□□ -2.4
VPS13CQ709C8 AC005668.1-201ENST00000571142 476 ntBASIC0.05□□□□□ -2.4
VPS13CQ709C8 RNA5SP205-201ENST00000364653 136 ntBASIC0.05□□□□□ -2.4
VPS13CQ709C8 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC0.05□□□□□ -2.4
VPS13CQ709C8 PDCL2P1-201ENST00000419302 352 ntBASIC0.05□□□□□ -2.4
VPS13CQ709C8 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC0.05□□□□□ -2.4
VPS13CQ709C8 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC0.05□□□□□ -2.4
VPS13CQ709C8 RPL31P3-201ENST00000458430 332 ntBASIC0.05□□□□□ -2.4
VPS13CQ709C8 CARD18-203ENST00000532895 422 ntTSL 2 BASIC0.05□□□□□ -2.4
VPS13CQ709C8 MIR378F-201ENST00000578143 78 ntBASIC0.05□□□□□ -2.4
VPS13CQ709C8 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC0.05□□□□□ -2.4
VPS13CQ709C8 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC0.04□□□□□ -2.4
VPS13CQ709C8 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC0.04□□□□□ -2.4
VPS13CQ709C8 AL353898.1-201ENST00000444055 238 ntBASIC0.04□□□□□ -2.4
VPS13CQ709C8 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC0.04□□□□□ -2.4
VPS13CQ709C8 AL513343.1-201ENST00000451818 792 ntBASIC0.04□□□□□ -2.4
VPS13CQ709C8 HSPE1P22-201ENST00000456856 327 ntBASIC0.04□□□□□ -2.4
VPS13CQ709C8 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC0.04□□□□□ -2.4
VPS13CQ709C8 AC025465.4-201ENST00000513422 638 ntBASIC0.04□□□□□ -2.4
VPS13CQ709C8 OR10V3P-201ENST00000525712 725 ntBASIC0.04□□□□□ -2.4
VPS13CQ709C8 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC0.04□□□□□ -2.4
VPS13CQ709C8 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC0.04□□□□□ -2.4
VPS13CQ709C8 VN1R84P-201ENST00000593697 235 ntBASIC0.04□□□□□ -2.4
VPS13CQ709C8 AC021171.1-201ENST00000603137 706 ntBASIC0.04□□□□□ -2.4
VPS13CQ709C8 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC0.04□□□□□ -2.4
VPS13CQ709C8 RNU2-19P-201ENST00000517288 84 ntBASIC0.04□□□□□ -2.4
VPS13CQ709C8 AC104417.1-201ENST00000523974 751 ntBASIC0.04□□□□□ -2.4
VPS13CQ709C8 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC0.04□□□□□ -2.4
VPS13CQ709C8 RNU6-654P-201ENST00000364373 107 ntBASIC0.04□□□□□ -2.4
VPS13CQ709C8 SNORA51.10-201ENST00000384418 136 ntBASIC0.04□□□□□ -2.4
VPS13CQ709C8 BTF3P11-201ENST00000426582 477 ntBASIC0.04□□□□□ -2.4
VPS13CQ709C8 AL669831.1-202ENST00000428504 417 ntBASIC0.04□□□□□ -2.4
VPS13CQ709C8 MTND2P2-201ENST00000434633 945 ntBASIC0.04□□□□□ -2.4
VPS13CQ709C8 GTF2IP13-201ENST00000438487 386 ntBASIC0.04□□□□□ -2.4
VPS13CQ709C8 RPL21P47-201ENST00000483696 477 ntBASIC0.04□□□□□ -2.4
VPS13CQ709C8 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC0.04□□□□□ -2.4
VPS13CQ709C8 RNU7-193P-201ENST00000516723 65 ntBASIC0.04□□□□□ -2.4
VPS13CQ709C8 SCARNA16.5-201ENST00000517114 183 ntBASIC0.04□□□□□ -2.4
VPS13CQ709C8 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC0.04□□□□□ -2.4
VPS13CQ709C8 AC018659.1-201ENST00000551083 169 ntBASIC0.04□□□□□ -2.4
VPS13CQ709C8 AC105224.1-201ENST00000587055 421 ntBASIC0.04□□□□□ -2.4
VPS13CQ709C8 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC0.04□□□□□ -2.4
VPS13CQ709C8 AC025594.3-201ENST00000613068 790 ntBASIC0.04□□□□□ -2.4
VPS13CQ709C8 Z75746.1-201ENST00000440243 2080 ntBASIC0.04□□□□□ -2.4
VPS13CQ709C8 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC0.03□□□□□ -2.4
VPS13CQ709C8 RNU1-124P-201ENST00000363861 145 ntBASIC0.03□□□□□ -2.4
VPS13CQ709C8 AL356421.1-201ENST00000403255 413 ntBASIC0.03□□□□□ -2.4
VPS13CQ709C8 AL355615.1-201ENST00000406187 641 ntBASIC0.03□□□□□ -2.4
VPS13CQ709C8 RPS26P45-201ENST00000471748 340 ntBASIC0.03□□□□□ -2.4
VPS13CQ709C8 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC0.03□□□□□ -2.4
VPS13CQ709C8 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC0.03□□□□□ -2.4
VPS13CQ709C8 ZNF33BP1-201ENST00000452497 1834 ntBASIC0.03□□□□□ -2.4
VPS13CQ709C8 TRAPPC2P8-201ENST00000440676 396 ntBASIC0.03□□□□□ -2.4
VPS13CQ709C8 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC0.03□□□□□ -2.4
VPS13CQ709C8 MIR6076-201ENST00000617521 113 ntBASIC0.03□□□□□ -2.4
VPS13CQ709C8 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC0.03□□□□□ -2.4
VPS13CQ709C8 SNORD114-28-201ENST00000363610 72 ntBASIC0.03□□□□□ -2.41
VPS13CQ709C8 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC0.03□□□□□ -2.41
VPS13CQ709C8 SNORA25-201ENST00000384384 134 ntBASIC0.03□□□□□ -2.41
VPS13CQ709C8 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC0.03□□□□□ -2.41
VPS13CQ709C8 AL355812.1-201ENST00000603215 216 ntBASIC0.03□□□□□ -2.41
VPS13CQ709C8 AP000811.1-201ENST00000603803 651 ntBASIC0.03□□□□□ -2.41
VPS13CQ709C8 AC073349.3-201ENST00000617616 186 ntBASIC0.03□□□□□ -2.41
VPS13CQ709C8 AC147055.4-201ENST00000504399 745 ntBASIC0.02□□□□□ -2.41
VPS13CQ709C8 AC105914.1-201ENST00000511798 226 ntBASIC0.02□□□□□ -2.41
VPS13CQ709C8 MGST1-215ENST00000540056 546 ntTSL 3 BASIC0.02□□□□□ -2.41
VPS13CQ709C8 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC0.02□□□□□ -2.41
VPS13CQ709C8 AL161423.1-201ENST00000613700 262 ntBASIC0.02□□□□□ -2.41
VPS13CQ709C8 Y_RNA.551-201ENST00000384661 102 ntBASIC0.02□□□□□ -2.41
VPS13CQ709C8 AC092634.2-201ENST00000428146 1010 ntBASIC0.02□□□□□ -2.41
VPS13CQ709C8 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC0.02□□□□□ -2.41
VPS13CQ709C8 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC0.02□□□□□ -2.41
VPS13CQ709C8 snoU13.21-201ENST00000459368 105 ntBASIC0.02□□□□□ -2.41
VPS13CQ709C8 OR5H4P-201ENST00000510851 923 ntBASIC0.02□□□□□ -2.41
VPS13CQ709C8 MIR3678-201ENST00000578455 94 ntBASIC0.02□□□□□ -2.41
VPS13CQ709C8 MTCO2P2-201ENST00000591258 225 ntBASIC0.02□□□□□ -2.41
VPS13CQ709C8 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC0.02□□□□□ -2.41
VPS13CQ709C8 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC0.02□□□□□ -2.41
VPS13CQ709C8 RPS26P55-201ENST00000471178 356 ntBASIC0.02□□□□□ -2.41
VPS13CQ709C8 MTCO3P35-201ENST00000485582 781 ntBASIC0.02□□□□□ -2.41
VPS13CQ709C8 AL163195.1-201ENST00000496941 348 ntBASIC0.02□□□□□ -2.41
VPS13CQ709C8 LSM6P2-201ENST00000552208 177 ntBASIC0.02□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 131.8 ms