Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 AC098583.1-201ENST00000480875 255 ntBASIC-0.01□□□□□ -2.41
VCANP13611 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC-0.01□□□□□ -2.41
VCANP13611 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC-0.01□□□□□ -2.41
VCANP13611 SNORD84-203ENST00000584275 78 ntBASIC-0.01□□□□□ -2.41
VCANP13611 RNU6-84P-201ENST00000607737 102 ntBASIC-0.01□□□□□ -2.41
VCANP13611 PART1_2.1-201ENST00000612397 250 ntBASIC-0.01□□□□□ -2.41
VCANP13611 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC-0.01□□□□□ -2.41
VCANP13611 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC-0.01□□□□□ -2.41
VCANP13611 ANKRD30BP1-201ENST00000451052 2186 ntBASIC-0.01□□□□□ -2.41
VCANP13611 SNORD18A-201ENST00000363753 72 ntBASIC-0.02□□□□□ -2.41
VCANP13611 MTCO3P45-201ENST00000443036 613 ntBASIC-0.02□□□□□ -2.41
VCANP13611 AC136619.2-201ENST00000563361 631 ntBASIC-0.02□□□□□ -2.41
VCANP13611 AL021879.1-201ENST00000611756 288 ntBASIC-0.02□□□□□ -2.41
VCANP13611 RNY4P27-201ENST00000363341 96 ntBASIC-0.02□□□□□ -2.41
VCANP13611 SNORA32.3-201ENST00000384772 121 ntBASIC-0.02□□□□□ -2.41
VCANP13611 AL163195.1-201ENST00000496941 348 ntBASIC-0.02□□□□□ -2.41
VCANP13611 CD24P2-201ENST00000565486 219 ntBASIC-0.02□□□□□ -2.41
VCANP13611 AC008121.1-201ENST00000603244 268 ntBASIC-0.02□□□□□ -2.41
VCANP13611 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC-0.02□□□□□ -2.41
VCANP13611 AC145146.1-201ENST00000496370 254 ntBASIC-0.02□□□□□ -2.41
VCANP13611 RNU6ATAC39P-201ENST00000516309 149 ntBASIC-0.02□□□□□ -2.41
VCANP13611 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC-0.02□□□□□ -2.41
VCANP13611 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC-0.02□□□□□ -2.41
VCANP13611 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC-0.02□□□□□ -2.41
VCANP13611 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC-0.03□□□□□ -2.41
VCANP13611 RNU6-1327P-201ENST00000365302 105 ntBASIC-0.03□□□□□ -2.41
VCANP13611 AC244505.3-201ENST00000454598 187 ntBASIC-0.03□□□□□ -2.41
VCANP13611 AC002350.1-201ENST00000490759 375 ntBASIC-0.03□□□□□ -2.41
VCANP13611 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC-0.03□□□□□ -2.41
VCANP13611 AC019288.1-201ENST00000557918 224 ntBASIC-0.03□□□□□ -2.41
VCANP13611 MIR3198-2-201ENST00000577868 80 ntBASIC-0.03□□□□□ -2.41
VCANP13611 RPL22P18-201ENST00000417197 377 ntBASIC-0.03□□□□□ -2.41
VCANP13611 AC092393.1-201ENST00000439625 742 ntBASIC-0.03□□□□□ -2.41
VCANP13611 OR2AQ1P-201ENST00000451972 200 ntBASIC-0.03□□□□□ -2.41
VCANP13611 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC-0.03□□□□□ -2.41
VCANP13611 AK6-205ENST00000618980 483 ntTSL 2 BASIC-0.03□□□□□ -2.41
VCANP13611 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC-0.03□□□□□ -2.41
VCANP13611 RNU6-160P-201ENST00000384591 107 ntBASIC-0.03□□□□□ -2.41
VCANP13611 RPL30P11-203ENST00000598995 310 ntBASIC-0.03□□□□□ -2.41
VCANP13611 AC069114.2-201ENST00000604699 304 ntBASIC-0.03□□□□□ -2.41
VCANP13611 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC-0.04□□□□□ -2.42
VCANP13611 AC008562.1-201ENST00000521763 330 ntBASIC-0.04□□□□□ -2.42
VCANP13611 AC018659.1-201ENST00000551083 169 ntBASIC-0.04□□□□□ -2.42
VCANP13611 MIR4299-201ENST00000577899 72 ntBASIC-0.04□□□□□ -2.42
VCANP13611 AC004832.4-201ENST00000608952 331 ntBASIC-0.04□□□□□ -2.42
VCANP13611 Z75746.1-201ENST00000440243 2080 ntBASIC-0.04□□□□□ -2.42
VCANP13611 Y_RNA.86-201ENST00000363020 111 ntBASIC-0.04□□□□□ -2.42
VCANP13611 MTND4P19-201ENST00000446659 478 ntBASIC-0.04□□□□□ -2.42
VCANP13611 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC-0.04□□□□□ -2.42
VCANP13611 AC108120.2-201ENST00000512973 294 ntBASIC-0.04□□□□□ -2.42
VCANP13611 MIR8064-201ENST00000612863 90 ntBASIC-0.04□□□□□ -2.42
VCANP13611 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC-0.04□□□□□ -2.42
VCANP13611 AC027335.2-201ENST00000624030 375 ntBASIC-0.04□□□□□ -2.42
VCANP13611 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC-0.05□□□□□ -2.42
VCANP13611 AC138393.1-203ENST00000327086 343 ntBASIC-0.05□□□□□ -2.42
VCANP13611 Y_RNA.228-201ENST00000364346 98 ntBASIC-0.05□□□□□ -2.42
VCANP13611 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC-0.05□□□□□ -2.42
VCANP13611 RNU4-63P-201ENST00000411313 118 ntBASIC-0.05□□□□□ -2.42
VCANP13611 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC-0.05□□□□□ -2.42
VCANP13611 AL669831.1-202ENST00000428504 417 ntBASIC-0.05□□□□□ -2.42
VCANP13611 GTF2IP13-201ENST00000438487 386 ntBASIC-0.05□□□□□ -2.42
VCANP13611 MTATP6P23-201ENST00000440153 476 ntBASIC-0.05□□□□□ -2.42
VCANP13611 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC-0.05□□□□□ -2.42
VCANP13611 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC-0.05□□□□□ -2.42
VCANP13611 RNA5SP165-201ENST00000517142 115 ntBASIC-0.05□□□□□ -2.42
VCANP13611 RNU2-19P-201ENST00000517288 84 ntBASIC-0.05□□□□□ -2.42
VCANP13611 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC-0.05□□□□□ -2.42
VCANP13611 AP001269.3-201ENST00000588718 329 ntBASIC-0.05□□□□□ -2.42
VCANP13611 AC106900.2-201ENST00000604994 317 ntBASIC-0.05□□□□□ -2.42
VCANP13611 Y_RNA.493-201ENST00000384422 102 ntBASIC-0.05□□□□□ -2.42
VCANP13611 AGR3-202ENST00000402239 563 ntTSL 2 BASIC-0.05□□□□□ -2.42
VCANP13611 RNA5SP222-201ENST00000411039 105 ntBASIC-0.05□□□□□ -2.42
VCANP13611 AC096920.1-201ENST00000423991 241 ntBASIC-0.05□□□□□ -2.42
VCANP13611 HMGN2P34-201ENST00000437647 269 ntBASIC-0.05□□□□□ -2.42
VCANP13611 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC-0.05□□□□□ -2.42
VCANP13611 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC-0.05□□□□□ -2.42
VCANP13611 MIR4661-201ENST00000582720 75 ntBASIC-0.05□□□□□ -2.42
VCANP13611 AC090517.2-201ENST00000614966 680 ntBASIC-0.05□□□□□ -2.42
VCANP13611 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC-0.05□□□□□ -2.42
VCANP13611 Y_RNA.490-201ENST00000384413 102 ntBASIC-0.06□□□□□ -2.42
VCANP13611 RNU1-119P-201ENST00000391122 165 ntBASIC-0.06□□□□□ -2.42
VCANP13611 MTATP6P4-201ENST00000427725 675 ntBASIC-0.06□□□□□ -2.42
VCANP13611 HSPE1P9-201ENST00000440046 311 ntBASIC-0.06□□□□□ -2.42
VCANP13611 ACA64.5-201ENST00000516207 127 ntBASIC-0.06□□□□□ -2.42
VCANP13611 CARD18-203ENST00000532895 422 ntTSL 2 BASIC-0.06□□□□□ -2.42
VCANP13611 AC016256.1-201ENST00000547971 354 ntBASIC-0.06□□□□□ -2.42
VCANP13611 AL592221.1-201ENST00000605266 382 ntBASIC-0.06□□□□□ -2.42
VCANP13611 AC243772.1-201ENST00000451620 410 ntBASIC-0.06□□□□□ -2.42
VCANP13611 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC-0.06□□□□□ -2.42
VCANP13611 RPL26P26-201ENST00000480251 434 ntBASIC-0.06□□□□□ -2.42
VCANP13611 AC090616.3-201ENST00000582184 217 ntBASIC-0.06□□□□□ -2.42
VCANP13611 AC012254.4-201ENST00000588843 273 ntBASIC-0.06□□□□□ -2.42
VCANP13611 MTCO2P2-201ENST00000591258 225 ntBASIC-0.06□□□□□ -2.42
VCANP13611 uc_338.34-201ENST00000617467 174 ntBASIC-0.06□□□□□ -2.42
VCANP13611 AL159152.1-201ENST00000635019 2587 ntBASIC-0.06□□□□□ -2.42
VCANP13611 Y_RNA.181-201ENST00000363872 101 ntBASIC-0.06□□□□□ -2.42
VCANP13611 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC-0.06□□□□□ -2.42
VCANP13611 AC241584.1-201ENST00000438469 1241 ntBASIC-0.06□□□□□ -2.42
VCANP13611 AGGF1P5-201ENST00000567900 919 ntBASIC-0.06□□□□□ -2.42
VCANP13611 AC092474.3-201ENST00000603022 568 ntBASIC-0.06□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms