Protein–RNA interactions for Protein: O75175

CNOT3, CCR4-NOT transcription complex subunit 3, humanhuman

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3O75175 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.33□□□□□ -1.88
CNOT3O75175 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CNOT3O75175 AC118273.1-201ENST00000525324 3006 ntBASIC3.32□□□□□ -1.88
CNOT3O75175 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
CNOT3O75175 RNU1-33P-201ENST00000364249 162 ntBASIC3.32□□□□□ -1.88
CNOT3O75175 RNA5SP267-201ENST00000364893 126 ntBASIC3.32□□□□□ -1.88
CNOT3O75175 Y_RNA.339-201ENST00000365325 102 ntBASIC3.32□□□□□ -1.88
CNOT3O75175 SNORA4.3-201ENST00000365564 137 ntBASIC3.32□□□□□ -1.88
CNOT3O75175 Y_RNA.445-201ENST00000384168 102 ntBASIC3.32□□□□□ -1.88
CNOT3O75175 RNU6-434P-201ENST00000384376 107 ntBASIC3.32□□□□□ -1.88
CNOT3O75175 MIR591-201ENST00000385290 95 ntBASIC3.32□□□□□ -1.88
CNOT3O75175 RN7SKP53-201ENST00000411337 315 ntBASIC3.32□□□□□ -1.88
CNOT3O75175 BX842559.1-201ENST00000419615 532 ntBASIC3.32□□□□□ -1.88
CNOT3O75175 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.32□□□□□ -1.88
CNOT3O75175 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.32□□□□□ -1.88
CNOT3O75175 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.32□□□□□ -1.88
CNOT3O75175 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC3.32□□□□□ -1.88
CNOT3O75175 AC104472.2-201ENST00000469035 601 ntBASIC3.32□□□□□ -1.88
CNOT3O75175 RPL7P5-201ENST00000471472 736 ntBASIC3.32□□□□□ -1.88
CNOT3O75175 AC108860.1-201ENST00000484521 383 ntBASIC3.32□□□□□ -1.88
CNOT3O75175 AC096576.1-201ENST00000489014 359 ntBASIC3.32□□□□□ -1.88
CNOT3O75175 MLLT10P2-201ENST00000506434 249 ntBASIC3.32□□□□□ -1.88
CNOT3O75175 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.32□□□□□ -1.88
CNOT3O75175 RNA5SP385-201ENST00000515947 110 ntBASIC3.32□□□□□ -1.88
CNOT3O75175 RNU2-27P-201ENST00000516185 142 ntBASIC3.32□□□□□ -1.88
CNOT3O75175 RNU6-327P-201ENST00000516270 127 ntBASIC3.32□□□□□ -1.88
CNOT3O75175 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.32□□□□□ -1.88
CNOT3O75175 APOOP3-201ENST00000536787 586 ntBASIC3.32□□□□□ -1.88
CNOT3O75175 AC007151.1-201ENST00000572774 483 ntBASIC3.32□□□□□ -1.88
CNOT3O75175 MIR3200-201ENST00000580767 85 ntBASIC3.32□□□□□ -1.88
CNOT3O75175 MIR4506-201ENST00000584693 77 ntBASIC3.32□□□□□ -1.88
CNOT3O75175 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.32□□□□□ -1.88
CNOT3O75175 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.32□□□□□ -1.88
CNOT3O75175 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC3.32□□□□□ -1.88
CNOT3O75175 AC040896.1-201ENST00000613819 479 ntBASIC3.32□□□□□ -1.88
CNOT3O75175 AL355365.1-201ENST00000616480 294 ntBASIC3.32□□□□□ -1.88
CNOT3O75175 PLCE1P1-201ENST00000622094 305 ntBASIC3.32□□□□□ -1.88
CNOT3O75175 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CNOT3O75175 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.32□□□□□ -1.88
CNOT3O75175 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.32□□□□□ -1.88
CNOT3O75175 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
CNOT3O75175 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
CNOT3O75175 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
CNOT3O75175 RNA5SP295-201ENST00000362655 121 ntBASIC3.31□□□□□ -1.88
CNOT3O75175 RNU5A-1-201ENST00000362698 116 ntBASIC3.31□□□□□ -1.88
CNOT3O75175 Y_RNA.128-201ENST00000363391 112 ntBASIC3.31□□□□□ -1.88
CNOT3O75175 RNU6-173P-201ENST00000364215 104 ntBASIC3.31□□□□□ -1.88
CNOT3O75175 RNA5SP42-201ENST00000364278 115 ntBASIC3.31□□□□□ -1.88
CNOT3O75175 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.31□□□□□ -1.88
CNOT3O75175 MIR559-201ENST00000385188 96 ntBASIC3.31□□□□□ -1.88
CNOT3O75175 SNORA75.4-201ENST00000391278 119 ntBASIC3.31□□□□□ -1.88
CNOT3O75175 RN7SKP158-201ENST00000410453 326 ntBASIC3.31□□□□□ -1.88
CNOT3O75175 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.31□□□□□ -1.88
CNOT3O75175 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CNOT3O75175 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.31□□□□□ -1.88
CNOT3O75175 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.31□□□□□ -1.88
CNOT3O75175 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.31□□□□□ -1.88
CNOT3O75175 RPL30P15-201ENST00000457129 321 ntBASIC3.31□□□□□ -1.88
CNOT3O75175 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.31□□□□□ -1.88
CNOT3O75175 RPS4XP13-201ENST00000483219 789 ntBASIC3.31□□□□□ -1.88
CNOT3O75175 AC093663.1-201ENST00000497190 394 ntBASIC3.31□□□□□ -1.88
CNOT3O75175 MTND5P5-201ENST00000503764 376 ntBASIC3.31□□□□□ -1.88
CNOT3O75175 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC3.31□□□□□ -1.88
CNOT3O75175 AC005741.1-201ENST00000511094 432 ntBASIC3.31□□□□□ -1.88
CNOT3O75175 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.31□□□□□ -1.88
CNOT3O75175 SNORA64.4-201ENST00000516632 81 ntBASIC3.31□□□□□ -1.88
CNOT3O75175 RN7SKP258-201ENST00000517151 304 ntBASIC3.31□□□□□ -1.88
CNOT3O75175 SNORA31.22-201ENST00000517204 135 ntBASIC3.31□□□□□ -1.88
CNOT3O75175 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.31□□□□□ -1.88
CNOT3O75175 AP004371.1-201ENST00000525240 214 ntBASIC3.31□□□□□ -1.88
CNOT3O75175 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.31□□□□□ -1.88
CNOT3O75175 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.31□□□□□ -1.88
CNOT3O75175 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.31□□□□□ -1.88
CNOT3O75175 MIR3941-201ENST00000582572 103 ntBASIC3.31□□□□□ -1.88
CNOT3O75175 AC174048.1-201ENST00000603389 144 ntBASIC3.31□□□□□ -1.88
CNOT3O75175 AL670379.10-201ENST00000604330 253 ntBASIC3.31□□□□□ -1.88
CNOT3O75175 AL670379.9-201ENST00000605428 253 ntBASIC3.31□□□□□ -1.88
CNOT3O75175 AL353748.2-201ENST00000622148 471 ntBASIC3.31□□□□□ -1.88
CNOT3O75175 MTND5P42-201ENST00000637720 498 ntBASIC3.31□□□□□ -1.88
CNOT3O75175 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CNOT3O75175 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CNOT3O75175 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.3□□□□□ -1.88
CNOT3O75175 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.3□□□□□ -1.88
CNOT3O75175 Y_RNA.212-201ENST00000364177 102 ntBASIC3.3□□□□□ -1.88
CNOT3O75175 Y_RNA.216-201ENST00000364205 93 ntBASIC3.3□□□□□ -1.88
CNOT3O75175 SNORA7.2-201ENST00000364446 145 ntBASIC3.3□□□□□ -1.88
CNOT3O75175 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.3□□□□□ -1.88
CNOT3O75175 AC080125.1-201ENST00000414888 684 ntBASIC3.3□□□□□ -1.88
CNOT3O75175 RPLP0P7-201ENST00000416050 667 ntBASIC3.3□□□□□ -1.88
CNOT3O75175 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC3.3□□□□□ -1.88
CNOT3O75175 MTATP6P4-201ENST00000427725 675 ntBASIC3.3□□□□□ -1.88
CNOT3O75175 AC005300.1-201ENST00000428401 373 ntBASIC3.3□□□□□ -1.88
CNOT3O75175 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.3□□□□□ -1.88
CNOT3O75175 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC3.3□□□□□ -1.88
CNOT3O75175 RPL23AP83-201ENST00000434984 473 ntBASIC3.3□□□□□ -1.88
CNOT3O75175 HMGB1P12-201ENST00000438594 598 ntBASIC3.3□□□□□ -1.88
CNOT3O75175 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC3.3□□□□□ -1.88
CNOT3O75175 RNU7-167P-201ENST00000459160 62 ntBASIC3.3□□□□□ -1.88
CNOT3O75175 Y_RNA.631-201ENST00000459607 101 ntBASIC3.3□□□□□ -1.88
CNOT3O75175 AC084357.1-201ENST00000473404 255 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 146.2 ms