Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 ZNF519P1-201ENST00000449011 1626 ntBASIC2.58□□□□□ -2
NPIPA3F8WFD2 AC138915.1-201ENST00000565427 1685 ntBASIC2.58□□□□□ -2
NPIPA3F8WFD2 RNU6-1287P-201ENST00000362914 107 ntBASIC2.58□□□□□ -2
NPIPA3F8WFD2 Y_RNA.296-201ENST00000364930 108 ntBASIC2.58□□□□□ -2
NPIPA3F8WFD2 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
NPIPA3F8WFD2 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC2.58□□□□□ -2
NPIPA3F8WFD2 Z98749.2-208ENST00000381646 500 ntBASIC2.58□□□□□ -2
NPIPA3F8WFD2 SNORA75B-201ENST00000384053 137 ntBASIC2.58□□□□□ -2
NPIPA3F8WFD2 RNU5A-6P-201ENST00000384136 116 ntBASIC2.58□□□□□ -2
NPIPA3F8WFD2 RNU6-1060P-201ENST00000384664 107 ntBASIC2.58□□□□□ -2
NPIPA3F8WFD2 SNORA40C-201ENST00000391285 128 ntBASIC2.58□□□□□ -2
NPIPA3F8WFD2 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.58□□□□□ -2
NPIPA3F8WFD2 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC2.58□□□□□ -2
NPIPA3F8WFD2 AL592148.1-201ENST00000413568 445 ntBASIC2.58□□□□□ -2
NPIPA3F8WFD2 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.58□□□□□ -2
NPIPA3F8WFD2 AL513477.1-202ENST00000417061 214 ntBASIC2.58□□□□□ -2
NPIPA3F8WFD2 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC2.58□□□□□ -2
NPIPA3F8WFD2 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.58□□□□□ -2
NPIPA3F8WFD2 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC2.58□□□□□ -2
NPIPA3F8WFD2 AL078601.1-201ENST00000444542 271 ntBASIC2.58□□□□□ -2
NPIPA3F8WFD2 AL583843.1-201ENST00000456070 346 ntBASIC2.58□□□□□ -2
NPIPA3F8WFD2 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.58□□□□□ -2
NPIPA3F8WFD2 AL162395.1-201ENST00000457882 422 ntBASIC2.58□□□□□ -2
NPIPA3F8WFD2 AC022364.2-201ENST00000457963 554 ntBASIC2.58□□□□□ -2
NPIPA3F8WFD2 RPS29P15-201ENST00000458329 171 ntBASIC2.58□□□□□ -2
NPIPA3F8WFD2 RNU7-182P-201ENST00000459009 62 ntBASIC2.58□□□□□ -2
NPIPA3F8WFD2 OARD1-209ENST00000471367 401 ntTSL 2 BASIC2.58□□□□□ -2
NPIPA3F8WFD2 TRBV1-201ENST00000476502 284 ntBASIC2.58□□□□□ -2
NPIPA3F8WFD2 AC022493.1-201ENST00000492984 337 ntBASIC2.58□□□□□ -2
NPIPA3F8WFD2 MTND3P5-201ENST00000512798 333 ntBASIC2.58□□□□□ -2
NPIPA3F8WFD2 RNU6-405P-201ENST00000516637 110 ntBASIC2.58□□□□□ -2
NPIPA3F8WFD2 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.58□□□□□ -2
NPIPA3F8WFD2 GLYCAM1-201ENST00000546596 285 ntBASIC2.58□□□□□ -2
NPIPA3F8WFD2 AC006199.1-201ENST00000548728 219 ntBASIC2.58□□□□□ -2
NPIPA3F8WFD2 LINC00933-203ENST00000559812 219 ntBASIC2.58□□□□□ -2
NPIPA3F8WFD2 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.58□□□□□ -2
NPIPA3F8WFD2 MIR4672-201ENST00000583126 81 ntBASIC2.58□□□□□ -2
NPIPA3F8WFD2 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.58□□□□□ -2
NPIPA3F8WFD2 AC087683.1-201ENST00000591187 441 ntBASIC2.58□□□□□ -2
NPIPA3F8WFD2 AC091805.2-201ENST00000603848 235 ntBASIC2.58□□□□□ -2
NPIPA3F8WFD2 AC025449.1-201ENST00000603896 529 ntBASIC2.58□□□□□ -2
NPIPA3F8WFD2 AC008536.2-201ENST00000607284 349 ntBASIC2.58□□□□□ -2
NPIPA3F8WFD2 Z99129.1-201ENST00000612510 255 ntBASIC2.58□□□□□ -2
NPIPA3F8WFD2 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.58□□□□□ -2
NPIPA3F8WFD2 AC136475.10-201ENST00000620253 385 ntBASIC2.58□□□□□ -2
NPIPA3F8WFD2 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.58□□□□□ -2
NPIPA3F8WFD2 Z82195.2-201ENST00000612348 18351 ntBASIC2.57□□□□□ -2
NPIPA3F8WFD2 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.57□□□□□ -2
NPIPA3F8WFD2 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
NPIPA3F8WFD2 AC096644.4-201ENST00000563417 2912 ntBASIC2.57□□□□□ -2
NPIPA3F8WFD2 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.57□□□□□ -2
NPIPA3F8WFD2 VTRNA1-1-201ENST00000363120 99 ntBASIC2.57□□□□□ -2
NPIPA3F8WFD2 RNU6-898P-201ENST00000365627 104 ntBASIC2.57□□□□□ -2
NPIPA3F8WFD2 OR5H15-201ENST00000383696 930 ntBASIC2.57□□□□□ -2
NPIPA3F8WFD2 RNU1-109P-201ENST00000383960 147 ntBASIC2.57□□□□□ -2
NPIPA3F8WFD2 RNU6-166P-201ENST00000384371 107 ntBASIC2.57□□□□□ -2
NPIPA3F8WFD2 MIR512-1-201ENST00000384913 84 ntBASIC2.57□□□□□ -2
NPIPA3F8WFD2 Y_RNA.582-201ENST00000391023 95 ntBASIC2.57□□□□□ -2
NPIPA3F8WFD2 FO393413.1-201ENST00000402892 195 ntBASIC2.57□□□□□ -2
NPIPA3F8WFD2 GSTA9P-201ENST00000406231 611 ntBASIC2.57□□□□□ -2
NPIPA3F8WFD2 RNA5SP184-201ENST00000411071 108 ntBASIC2.57□□□□□ -2
NPIPA3F8WFD2 RNA5SP492-201ENST00000411330 114 ntBASIC2.57□□□□□ -2
NPIPA3F8WFD2 RNU6-387P-201ENST00000411331 105 ntBASIC2.57□□□□□ -2
NPIPA3F8WFD2 AL031779.1-201ENST00000415663 330 ntBASIC2.57□□□□□ -2
NPIPA3F8WFD2 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC2.57□□□□□ -2
NPIPA3F8WFD2 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC2.57□□□□□ -2
NPIPA3F8WFD2 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.57□□□□□ -2
NPIPA3F8WFD2 AL451074.3-201ENST00000437709 472 ntBASIC2.57□□□□□ -2
NPIPA3F8WFD2 AL161651.1-201ENST00000440882 223 ntBASIC2.57□□□□□ -2
NPIPA3F8WFD2 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.57□□□□□ -2
NPIPA3F8WFD2 AC092001.1-201ENST00000453012 261 ntBASIC2.57□□□□□ -2
NPIPA3F8WFD2 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC2.57□□□□□ -2
NPIPA3F8WFD2 RPL21P41-201ENST00000459863 264 ntBASIC2.57□□□□□ -2
NPIPA3F8WFD2 AP004217.1-201ENST00000480579 346 ntBASIC2.57□□□□□ -2
NPIPA3F8WFD2 RN7SL499P-201ENST00000481141 276 ntBASIC2.57□□□□□ -2
NPIPA3F8WFD2 EIF4EP3-201ENST00000498782 656 ntBASIC2.57□□□□□ -2
NPIPA3F8WFD2 FAM92A1P2-202ENST00000504766 877 ntBASIC2.57□□□□□ -2
NPIPA3F8WFD2 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC2.57□□□□□ -2
NPIPA3F8WFD2 SNORD27.1-201ENST00000516319 72 ntBASIC2.57□□□□□ -2
NPIPA3F8WFD2 RNU6-685P-201ENST00000517088 95 ntBASIC2.57□□□□□ -2
NPIPA3F8WFD2 AC007151.1-201ENST00000572774 483 ntBASIC2.57□□□□□ -2
NPIPA3F8WFD2 MIR4775-201ENST00000581168 75 ntBASIC2.57□□□□□ -2
NPIPA3F8WFD2 MIR548AC-201ENST00000585049 88 ntBASIC2.57□□□□□ -2
NPIPA3F8WFD2 AL022154.1-201ENST00000604698 785 ntBASIC2.57□□□□□ -2
NPIPA3F8WFD2 AC019159.1-201ENST00000605094 187 ntBASIC2.57□□□□□ -2
NPIPA3F8WFD2 RPL23AP88-201ENST00000605759 454 ntBASIC2.57□□□□□ -2
NPIPA3F8WFD2 AC007684.1-201ENST00000609671 477 ntBASIC2.57□□□□□ -2
NPIPA3F8WFD2 MIR7515-201ENST00000637837 67 ntBASIC2.57□□□□□ -2
NPIPA3F8WFD2 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC2.57□□□□□ -2
NPIPA3F8WFD2 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
NPIPA3F8WFD2 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.57□□□□□ -2
NPIPA3F8WFD2 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
NPIPA3F8WFD2 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.57□□□□□ -2
NPIPA3F8WFD2 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
NPIPA3F8WFD2 AL136360.1-201ENST00000503377 1900 ntBASIC2.56□□□□□ -2
NPIPA3F8WFD2 HSPA8P4-201ENST00000511877 1920 ntBASIC2.56□□□□□ -2
NPIPA3F8WFD2 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
NPIPA3F8WFD2 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
NPIPA3F8WFD2 RNU1-35P-201ENST00000362782 153 ntBASIC2.56□□□□□ -2
NPIPA3F8WFD2 SNORD3E-201ENST00000362899 217 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms