Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 U8.14-201ENST00000390843 143 ntBASIC1.07□□□□□ -2.24
KIAA1549Q9HCM3 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC1.07□□□□□ -2.24
KIAA1549Q9HCM3 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC1.07□□□□□ -2.24
KIAA1549Q9HCM3 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC1.07□□□□□ -2.24
KIAA1549Q9HCM3 NDUFA5P4-201ENST00000436704 385 ntBASIC1.07□□□□□ -2.24
KIAA1549Q9HCM3 RSU1P2-202ENST00000437884 485 ntBASIC1.07□□□□□ -2.24
KIAA1549Q9HCM3 COX6CP18-201ENST00000448769 222 ntBASIC1.07□□□□□ -2.24
KIAA1549Q9HCM3 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC1.07□□□□□ -2.24
KIAA1549Q9HCM3 AC098591.2-201ENST00000510152 315 ntBASIC1.07□□□□□ -2.24
KIAA1549Q9HCM3 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.07□□□□□ -2.24
KIAA1549Q9HCM3 AC008837.2-201ENST00000513076 418 ntBASIC1.07□□□□□ -2.24
KIAA1549Q9HCM3 SNORA76.2-201ENST00000517095 137 ntBASIC1.07□□□□□ -2.24
KIAA1549Q9HCM3 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.07□□□□□ -2.24
KIAA1549Q9HCM3 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC1.07□□□□□ -2.24
KIAA1549Q9HCM3 MIR4299-201ENST00000577899 72 ntBASIC1.07□□□□□ -2.24
KIAA1549Q9HCM3 AP005136.1-201ENST00000579765 429 ntBASIC1.07□□□□□ -2.24
KIAA1549Q9HCM3 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC1.07□□□□□ -2.24
KIAA1549Q9HCM3 AP000403.1-201ENST00000603349 851 ntBASIC1.07□□□□□ -2.24
KIAA1549Q9HCM3 AC073413.2-201ENST00000604332 360 ntBASIC1.07□□□□□ -2.24
KIAA1549Q9HCM3 AC103810.9-201ENST00000606688 112 ntBASIC1.07□□□□□ -2.24
KIAA1549Q9HCM3 AL138478.1-201ENST00000612252 832 ntBASIC1.07□□□□□ -2.24
KIAA1549Q9HCM3 AL118556.2-201ENST00000614375 824 ntBASIC1.07□□□□□ -2.24
KIAA1549Q9HCM3 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
KIAA1549Q9HCM3 AL596245.1-201ENST00000618994 362 ntBASIC1.07□□□□□ -2.24
KIAA1549Q9HCM3 AL133216.2-202ENST00000634512 349 ntBASIC1.07□□□□□ -2.24
KIAA1549Q9HCM3 MKKS-204ENST00000639674 192 ntBASIC1.07□□□□□ -2.24
KIAA1549Q9HCM3 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.07□□□□□ -2.24
KIAA1549Q9HCM3 RNU6-353P-201ENST00000364266 108 ntBASIC1.07□□□□□ -2.24
KIAA1549Q9HCM3 RNU4-91P-201ENST00000364778 135 ntBASIC1.07□□□□□ -2.24
KIAA1549Q9HCM3 MIR561-201ENST00000385216 97 ntBASIC1.07□□□□□ -2.24
KIAA1549Q9HCM3 AC068050.1-201ENST00000394891 380 ntBASIC1.07□□□□□ -2.24
KIAA1549Q9HCM3 RPL26P27-201ENST00000414397 437 ntBASIC1.07□□□□□ -2.24
KIAA1549Q9HCM3 AC007435.1-201ENST00000421086 415 ntBASIC1.07□□□□□ -2.24
KIAA1549Q9HCM3 PTGES3P4-201ENST00000426243 356 ntBASIC1.07□□□□□ -2.24
KIAA1549Q9HCM3 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC1.07□□□□□ -2.24
KIAA1549Q9HCM3 AC009238.1-201ENST00000442165 424 ntBASIC1.07□□□□□ -2.24
KIAA1549Q9HCM3 AC009237.6-201ENST00000446969 424 ntBASIC1.07□□□□□ -2.24
KIAA1549Q9HCM3 AC108729.2-201ENST00000476543 840 ntBASIC1.07□□□□□ -2.24
KIAA1549Q9HCM3 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC1.07□□□□□ -2.24
KIAA1549Q9HCM3 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC1.07□□□□□ -2.24
KIAA1549Q9HCM3 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC1.07□□□□□ -2.24
KIAA1549Q9HCM3 NDUFA5P6-201ENST00000542110 379 ntBASIC1.07□□□□□ -2.24
KIAA1549Q9HCM3 AC005951.2-201ENST00000576282 495 ntBASIC1.07□□□□□ -2.24
KIAA1549Q9HCM3 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC1.07□□□□□ -2.24
KIAA1549Q9HCM3 RN7SL622P-201ENST00000585292 275 ntBASIC1.07□□□□□ -2.24
KIAA1549Q9HCM3 AC004805.2-201ENST00000605382 482 ntBASIC1.07□□□□□ -2.24
KIAA1549Q9HCM3 AL583856.2-201ENST00000606298 543 ntBASIC1.07□□□□□ -2.24
KIAA1549Q9HCM3 AL138713.1-201ENST00000624026 2130 ntBASIC1.07□□□□□ -2.24
KIAA1549Q9HCM3 OR4G1P-203ENST00000641984 1631 ntBASIC1.06□□□□□ -2.24
KIAA1549Q9HCM3 Y_RNA.548-201ENST00000384656 105 ntBASIC1.06□□□□□ -2.24
KIAA1549Q9HCM3 MIR489-201ENST00000384923 84 ntBASIC1.06□□□□□ -2.24
KIAA1549Q9HCM3 MTND1P21-201ENST00000412991 285 ntBASIC1.06□□□□□ -2.24
KIAA1549Q9HCM3 BX664727.1-201ENST00000416024 466 ntBASIC1.06□□□□□ -2.24
KIAA1549Q9HCM3 AL158050.1-201ENST00000416077 457 ntBASIC1.06□□□□□ -2.24
KIAA1549Q9HCM3 MTCYBP32-201ENST00000427945 1084 ntBASIC1.06□□□□□ -2.24
KIAA1549Q9HCM3 AC093106.2-201ENST00000428212 385 ntBASIC1.06□□□□□ -2.24
KIAA1549Q9HCM3 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.06□□□□□ -2.24
KIAA1549Q9HCM3 AC112771.1-201ENST00000463581 102 ntBASIC1.06□□□□□ -2.24
KIAA1549Q9HCM3 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC1.06□□□□□ -2.24
KIAA1549Q9HCM3 AC008834.1-201ENST00000511612 175 ntBASIC1.06□□□□□ -2.24
KIAA1549Q9HCM3 RNA5SP137-201ENST00000516833 135 ntBASIC1.06□□□□□ -2.24
KIAA1549Q9HCM3 NRON-201ENST00000517270 370 ntBASIC1.06□□□□□ -2.24
KIAA1549Q9HCM3 AP005597.4-201ENST00000526762 229 ntBASIC1.06□□□□□ -2.24
KIAA1549Q9HCM3 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC1.06□□□□□ -2.24
KIAA1549Q9HCM3 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC1.06□□□□□ -2.24
KIAA1549Q9HCM3 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.06□□□□□ -2.24
KIAA1549Q9HCM3 RNU6-91P-201ENST00000607774 107 ntBASIC1.06□□□□□ -2.24
KIAA1549Q9HCM3 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC1.06□□□□□ -2.24
KIAA1549Q9HCM3 DUSP12P1-201ENST00000612874 516 ntBASIC1.06□□□□□ -2.24
KIAA1549Q9HCM3 AC013476.2-201ENST00000614456 459 ntBASIC1.06□□□□□ -2.24
KIAA1549Q9HCM3 AC104820.1-201ENST00000624183 307 ntBASIC1.06□□□□□ -2.24
KIAA1549Q9HCM3 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC1.06□□□□□ -2.24
KIAA1549Q9HCM3 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
KIAA1549Q9HCM3 RNU4-38P-201ENST00000364472 129 ntBASIC1.05□□□□□ -2.24
KIAA1549Q9HCM3 RNU6-754P-201ENST00000391166 107 ntBASIC1.05□□□□□ -2.24
KIAA1549Q9HCM3 RNA5SP465-201ENST00000391195 109 ntBASIC1.05□□□□□ -2.24
KIAA1549Q9HCM3 AL109755.1-201ENST00000401791 649 ntBASIC1.05□□□□□ -2.24
KIAA1549Q9HCM3 AC096920.1-201ENST00000423991 241 ntBASIC1.05□□□□□ -2.24
KIAA1549Q9HCM3 AL355994.1-201ENST00000424379 260 ntBASIC1.05□□□□□ -2.24
KIAA1549Q9HCM3 FO393414.1-201ENST00000428697 1184 ntBASIC1.05□□□□□ -2.24
KIAA1549Q9HCM3 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC1.05□□□□□ -2.24
KIAA1549Q9HCM3 MTND2P30-201ENST00000456663 382 ntBASIC1.05□□□□□ -2.24
KIAA1549Q9HCM3 AC068781.1-201ENST00000488231 618 ntBASIC1.05□□□□□ -2.24
KIAA1549Q9HCM3 RPS27AP10-201ENST00000496103 208 ntBASIC1.05□□□□□ -2.24
KIAA1549Q9HCM3 SNORA44.1-201ENST00000517031 108 ntBASIC1.05□□□□□ -2.24
KIAA1549Q9HCM3 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.05□□□□□ -2.24
KIAA1549Q9HCM3 AC107953.1-201ENST00000522216 297 ntBASIC1.05□□□□□ -2.24
KIAA1549Q9HCM3 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.05□□□□□ -2.24
KIAA1549Q9HCM3 AL132857.1-201ENST00000555180 708 ntBASIC1.05□□□□□ -2.24
KIAA1549Q9HCM3 ROCK1P1-201ENST00000573767 549 ntBASIC1.05□□□□□ -2.24
KIAA1549Q9HCM3 AC123912.5-201ENST00000605470 343 ntBASIC1.05□□□□□ -2.24
KIAA1549Q9HCM3 AC097468.3-201ENST00000607956 456 ntBASIC1.05□□□□□ -2.24
KIAA1549Q9HCM3 AC009233.1-201ENST00000616477 371 ntBASIC1.05□□□□□ -2.24
KIAA1549Q9HCM3 AL157770.1-201ENST00000623049 439 ntBASIC1.05□□□□□ -2.24
KIAA1549Q9HCM3 AC087821.2-201ENST00000637086 450 ntBASIC1.05□□□□□ -2.24
KIAA1549Q9HCM3 SUCLA2P2-201ENST00000417269 1309 ntBASIC1.05□□□□□ -2.24
KIAA1549Q9HCM3 RNU6-1032P-201ENST00000384100 107 ntBASIC1.05□□□□□ -2.24
KIAA1549Q9HCM3 MIR7-2-201ENST00000384970 110 ntBASIC1.05□□□□□ -2.24
KIAA1549Q9HCM3 AC127391.1-201ENST00000411737 98 ntBASIC1.05□□□□□ -2.24
KIAA1549Q9HCM3 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC1.05□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms