Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 AL451054.2-201ENST00000420896 202 ntBASIC1.49□□□□□ -2.17
TRIM4Q9C037 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
TRIM4Q9C037 BX510359.4-201ENST00000423750 193 ntBASIC1.49□□□□□ -2.17
TRIM4Q9C037 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC1.49□□□□□ -2.17
TRIM4Q9C037 SDAD1P3-201ENST00000427380 333 ntBASIC1.49□□□□□ -2.17
TRIM4Q9C037 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC1.49□□□□□ -2.17
TRIM4Q9C037 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC1.49□□□□□ -2.17
TRIM4Q9C037 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC1.49□□□□□ -2.17
TRIM4Q9C037 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC1.49□□□□□ -2.17
TRIM4Q9C037 HMGB1P35-201ENST00000503360 598 ntBASIC1.49□□□□□ -2.17
TRIM4Q9C037 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
TRIM4Q9C037 AL078605.1-201ENST00000603529 500 ntBASIC1.49□□□□□ -2.17
TRIM4Q9C037 AL357094.1-201ENST00000603845 844 ntBASIC1.49□□□□□ -2.17
TRIM4Q9C037 AC091152.3-201ENST00000604227 325 ntBASIC1.49□□□□□ -2.17
TRIM4Q9C037 AL360085.1-201ENST00000604713 532 ntBASIC1.49□□□□□ -2.17
TRIM4Q9C037 AC239868.4-201ENST00000608318 671 ntBASIC1.49□□□□□ -2.17
TRIM4Q9C037 AC107075.1-201ENST00000613695 314 ntBASIC1.49□□□□□ -2.17
TRIM4Q9C037 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
TRIM4Q9C037 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.48□□□□□ -2.17
TRIM4Q9C037 RNU6-549P-201ENST00000384433 107 ntBASIC1.48□□□□□ -2.17
TRIM4Q9C037 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
TRIM4Q9C037 NDUFS5P1-201ENST00000405668 289 ntBASIC1.48□□□□□ -2.17
TRIM4Q9C037 SRIP3-201ENST00000413200 219 ntBASIC1.48□□□□□ -2.17
TRIM4Q9C037 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.48□□□□□ -2.17
TRIM4Q9C037 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC1.48□□□□□ -2.17
TRIM4Q9C037 MTCYBP11-201ENST00000447254 1109 ntBASIC1.48□□□□□ -2.17
TRIM4Q9C037 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC1.48□□□□□ -2.17
TRIM4Q9C037 AMD1P1-201ENST00000457220 922 ntBASIC1.48□□□□□ -2.17
TRIM4Q9C037 AP001324.2-201ENST00000461163 319 ntBASIC1.48□□□□□ -2.17
TRIM4Q9C037 RPS29P1-201ENST00000465274 159 ntBASIC1.48□□□□□ -2.17
TRIM4Q9C037 AC092991.1-201ENST00000477176 376 ntBASIC1.48□□□□□ -2.17
TRIM4Q9C037 AL160314.1-201ENST00000490836 438 ntBASIC1.48□□□□□ -2.17
TRIM4Q9C037 TMEM251P1-201ENST00000503717 318 ntBASIC1.48□□□□□ -2.17
TRIM4Q9C037 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.48□□□□□ -2.17
TRIM4Q9C037 SMURF2P1-201ENST00000514992 481 ntBASIC1.48□□□□□ -2.17
TRIM4Q9C037 SNORA4.4-201ENST00000515921 135 ntBASIC1.48□□□□□ -2.17
TRIM4Q9C037 AC125611.1-201ENST00000549563 229 ntBASIC1.48□□□□□ -2.17
TRIM4Q9C037 AC008015.1-201ENST00000555505 465 ntBASIC1.48□□□□□ -2.17
TRIM4Q9C037 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC1.48□□□□□ -2.17
TRIM4Q9C037 ZNF971P-201ENST00000562068 1249 ntBASIC1.48□□□□□ -2.17
TRIM4Q9C037 AC090615.1-201ENST00000577519 154 ntBASIC1.48□□□□□ -2.17
TRIM4Q9C037 AC004805.2-201ENST00000605382 482 ntBASIC1.48□□□□□ -2.17
TRIM4Q9C037 AC087821.2-201ENST00000637086 450 ntBASIC1.48□□□□□ -2.17
TRIM4Q9C037 Y_RNA.354-201ENST00000365448 111 ntBASIC1.47□□□□□ -2.17
TRIM4Q9C037 MIR1323-201ENST00000408090 73 ntBASIC1.47□□□□□ -2.17
TRIM4Q9C037 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC1.47□□□□□ -2.17
TRIM4Q9C037 AL139421.1-201ENST00000423010 169 ntBASIC1.47□□□□□ -2.17
TRIM4Q9C037 MTND6P13-201ENST00000443510 523 ntBASIC1.47□□□□□ -2.17
TRIM4Q9C037 RPL7P55-201ENST00000450522 746 ntBASIC1.47□□□□□ -2.17
TRIM4Q9C037 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC1.47□□□□□ -2.17
TRIM4Q9C037 AC022861.1-201ENST00000522981 663 ntBASIC1.47□□□□□ -2.17
TRIM4Q9C037 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC1.47□□□□□ -2.17
TRIM4Q9C037 AC021739.1-201ENST00000559631 174 ntBASIC1.47□□□□□ -2.17
TRIM4Q9C037 MIR3167-201ENST00000579623 85 ntBASIC1.47□□□□□ -2.17
TRIM4Q9C037 MIR4637-201ENST00000582405 84 ntBASIC1.47□□□□□ -2.17
TRIM4Q9C037 AP002906.1-201ENST00000603405 233 ntBASIC1.47□□□□□ -2.17
TRIM4Q9C037 AL390208.1-201ENST00000605885 644 ntBASIC1.47□□□□□ -2.17
TRIM4Q9C037 AL138713.1-201ENST00000624026 2130 ntBASIC1.47□□□□□ -2.17
TRIM4Q9C037 ZNF209P-201ENST00000593450 2304 ntBASIC1.47□□□□□ -2.17
TRIM4Q9C037 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
TRIM4Q9C037 SNORD114-27-201ENST00000363766 70 ntBASIC1.46□□□□□ -2.18
TRIM4Q9C037 MIR506-201ENST00000384998 124 ntBASIC1.46□□□□□ -2.18
TRIM4Q9C037 DHFRP6-201ENST00000401776 268 ntBASIC1.46□□□□□ -2.18
TRIM4Q9C037 CCNG1P1-201ENST00000406783 885 ntBASIC1.46□□□□□ -2.18
TRIM4Q9C037 UBE2FP1-201ENST00000416536 447 ntBASIC1.46□□□□□ -2.18
TRIM4Q9C037 MTCYBP38-201ENST00000417160 1123 ntBASIC1.46□□□□□ -2.18
TRIM4Q9C037 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.46□□□□□ -2.18
TRIM4Q9C037 AL445669.1-201ENST00000426743 755 ntBASIC1.46□□□□□ -2.18
TRIM4Q9C037 VN1R108P-201ENST00000431580 830 ntBASIC1.46□□□□□ -2.18
TRIM4Q9C037 AL161651.1-201ENST00000440882 223 ntBASIC1.46□□□□□ -2.18
TRIM4Q9C037 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.46□□□□□ -2.18
TRIM4Q9C037 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC1.46□□□□□ -2.18
TRIM4Q9C037 RPS29P23-201ENST00000458635 123 ntBASIC1.46□□□□□ -2.18
TRIM4Q9C037 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.46□□□□□ -2.18
TRIM4Q9C037 AC098862.1-201ENST00000504991 413 ntBASIC1.46□□□□□ -2.18
TRIM4Q9C037 RNA5SP290-201ENST00000517133 127 ntBASIC1.46□□□□□ -2.18
TRIM4Q9C037 MTCO2P15-201ENST00000532655 656 ntBASIC1.46□□□□□ -2.18
TRIM4Q9C037 AC006199.1-201ENST00000548728 219 ntBASIC1.46□□□□□ -2.18
TRIM4Q9C037 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC1.46□□□□□ -2.18
TRIM4Q9C037 RPL21P5-201ENST00000554662 472 ntBASIC1.46□□□□□ -2.18
TRIM4Q9C037 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.46□□□□□ -2.18
TRIM4Q9C037 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC1.46□□□□□ -2.18
TRIM4Q9C037 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC1.46□□□□□ -2.18
TRIM4Q9C037 MIR6078-201ENST00000611069 100 ntBASIC1.46□□□□□ -2.18
TRIM4Q9C037 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC1.46□□□□□ -2.18
TRIM4Q9C037 AL353770.2-201ENST00000620024 78 ntBASIC1.46□□□□□ -2.18
TRIM4Q9C037 AL133216.2-202ENST00000634512 349 ntBASIC1.46□□□□□ -2.18
TRIM4Q9C037 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
TRIM4Q9C037 RNU1-72P-201ENST00000362976 153 ntBASIC1.45□□□□□ -2.18
TRIM4Q9C037 Y_RNA.178-201ENST00000363832 102 ntBASIC1.45□□□□□ -2.18
TRIM4Q9C037 MIR518A2-201ENST00000384966 87 ntBASIC1.45□□□□□ -2.18
TRIM4Q9C037 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
TRIM4Q9C037 RNU6-1300P-201ENST00000391046 108 ntBASIC1.45□□□□□ -2.18
TRIM4Q9C037 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC1.45□□□□□ -2.18
TRIM4Q9C037 AL355994.1-201ENST00000424379 260 ntBASIC1.45□□□□□ -2.18
TRIM4Q9C037 AC244035.1-201ENST00000430042 390 ntBASIC1.45□□□□□ -2.18
TRIM4Q9C037 AC092427.1-201ENST00000439177 601 ntBASIC1.45□□□□□ -2.18
TRIM4Q9C037 PTGES3P1-201ENST00000439531 483 ntBASIC1.45□□□□□ -2.18
TRIM4Q9C037 HMGN2P10-201ENST00000448085 265 ntBASIC1.45□□□□□ -2.18
TRIM4Q9C037 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC1.45□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms