Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 HMGB1P30-201ENST00000492455 606 ntBASIC2.67□□□□□ -1.98
CX3CL1P78423 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.67□□□□□ -1.98
CX3CL1P78423 RPL38P4-201ENST00000502376 214 ntBASIC2.67□□□□□ -1.98
CX3CL1P78423 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.67□□□□□ -1.98
CX3CL1P78423 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC2.67□□□□□ -1.98
CX3CL1P78423 AC007458.1-201ENST00000542812 373 ntBASIC2.67□□□□□ -1.98
CX3CL1P78423 DNAJC8P1-201ENST00000554535 372 ntBASIC2.67□□□□□ -1.98
CX3CL1P78423 AL118558.2-201ENST00000556294 238 ntBASIC2.67□□□□□ -1.98
CX3CL1P78423 MTCO3P23-201ENST00000561363 289 ntBASIC2.67□□□□□ -1.98
CX3CL1P78423 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.67□□□□□ -1.98
CX3CL1P78423 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.67□□□□□ -1.98
CX3CL1P78423 LRRC37A5P-203ENST00000580181 585 ntBASIC2.67□□□□□ -1.98
CX3CL1P78423 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC2.67□□□□□ -1.98
CX3CL1P78423 AC010525.2-201ENST00000590920 195 ntBASIC2.67□□□□□ -1.98
CX3CL1P78423 AL451007.1-201ENST00000595491 289 ntBASIC2.67□□□□□ -1.98
CX3CL1P78423 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC2.67□□□□□ -1.98
CX3CL1P78423 RMST_3.1-201ENST00000611651 109 ntBASIC2.67□□□□□ -1.98
CX3CL1P78423 DISC2.1-201ENST00000612827 205 ntBASIC2.67□□□□□ -1.98
CX3CL1P78423 AL355365.1-201ENST00000616480 294 ntBASIC2.67□□□□□ -1.98
CX3CL1P78423 RMST_4.1-201ENST00000616886 107 ntBASIC2.67□□□□□ -1.98
CX3CL1P78423 AL356321.1-201ENST00000621360 228 ntBASIC2.67□□□□□ -1.98
CX3CL1P78423 AC022418.1-201ENST00000624118 445 ntBASIC2.67□□□□□ -1.98
CX3CL1P78423 AC110079.1-202ENST00000635213 138 ntBASIC2.67□□□□□ -1.98
CX3CL1P78423 OR4G1P-203ENST00000641984 1631 ntBASIC2.67□□□□□ -1.98
CX3CL1P78423 MAPK10-362ENST00000641864 4484 ntBASIC2.67□□□□□ -1.98
CX3CL1P78423 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.66□□□□□ -1.98
CX3CL1P78423 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.66□□□□□ -1.98
CX3CL1P78423 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
CX3CL1P78423 RNU6-877P-201ENST00000383868 107 ntBASIC2.66□□□□□ -1.98
CX3CL1P78423 Y_RNA.399-201ENST00000383955 105 ntBASIC2.66□□□□□ -1.98
CX3CL1P78423 RNU6-434P-201ENST00000384376 107 ntBASIC2.66□□□□□ -1.98
CX3CL1P78423 Y_RNA.573-201ENST00000384763 105 ntBASIC2.66□□□□□ -1.98
CX3CL1P78423 MIR10A-201ENST00000385043 110 ntBASIC2.66□□□□□ -1.98
CX3CL1P78423 MIR767-201ENST00000390228 109 ntBASIC2.66□□□□□ -1.98
CX3CL1P78423 RNU2-3P-201ENST00000410144 191 ntBASIC2.66□□□□□ -1.98
CX3CL1P78423 RNU6-607P-201ENST00000411283 108 ntBASIC2.66□□□□□ -1.98
CX3CL1P78423 CYCSP33-201ENST00000414485 327 ntBASIC2.66□□□□□ -1.98
CX3CL1P78423 SNRPEP10-201ENST00000420249 274 ntBASIC2.66□□□□□ -1.98
CX3CL1P78423 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC2.66□□□□□ -1.98
CX3CL1P78423 TRIAP1P1-201ENST00000427062 225 ntBASIC2.66□□□□□ -1.98
CX3CL1P78423 AL627311.1-201ENST00000431514 115 ntBASIC2.66□□□□□ -1.98
CX3CL1P78423 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.66□□□□□ -1.98
CX3CL1P78423 TRAPPC2P3-201ENST00000443200 321 ntBASIC2.66□□□□□ -1.98
CX3CL1P78423 PRPS1P1-201ENST00000445305 876 ntBASIC2.66□□□□□ -1.98
CX3CL1P78423 WASF1P1-201ENST00000447560 1131 ntBASIC2.66□□□□□ -1.98
CX3CL1P78423 HMGN2P10-201ENST00000448085 265 ntBASIC2.66□□□□□ -1.98
CX3CL1P78423 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC2.66□□□□□ -1.98
CX3CL1P78423 MTND3P16-201ENST00000452205 344 ntBASIC2.66□□□□□ -1.98
CX3CL1P78423 MTCO3P38-201ENST00000468910 766 ntBASIC2.66□□□□□ -1.98
CX3CL1P78423 OARD1-209ENST00000471367 401 ntTSL 2 BASIC2.66□□□□□ -1.98
CX3CL1P78423 RPL21P93-201ENST00000480465 489 ntBASIC2.66□□□□□ -1.98
CX3CL1P78423 RN7SL293P-201ENST00000481765 281 ntBASIC2.66□□□□□ -1.98
CX3CL1P78423 AC011005.2-201ENST00000487324 359 ntBASIC2.66□□□□□ -1.98
CX3CL1P78423 RN7SL283P-201ENST00000489055 303 ntBASIC2.66□□□□□ -1.98
CX3CL1P78423 RPS27P26-201ENST00000494583 239 ntBASIC2.66□□□□□ -1.98
CX3CL1P78423 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC2.66□□□□□ -1.98
CX3CL1P78423 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC2.66□□□□□ -1.98
CX3CL1P78423 RAC1P5-201ENST00000512182 576 ntBASIC2.66□□□□□ -1.98
CX3CL1P78423 MIR892C-201ENST00000516410 77 ntBASIC2.66□□□□□ -1.98
CX3CL1P78423 RNU6-1038P-201ENST00000516516 104 ntBASIC2.66□□□□□ -1.98
CX3CL1P78423 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.66□□□□□ -1.98
CX3CL1P78423 AC092325.1-201ENST00000566449 554 ntBASIC2.66□□□□□ -1.98
CX3CL1P78423 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.66□□□□□ -1.98
CX3CL1P78423 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC2.66□□□□□ -1.98
CX3CL1P78423 AC104458.1-201ENST00000608243 463 ntBASIC2.66□□□□□ -1.98
CX3CL1P78423 AC068944.2-201ENST00000610373 403 ntBASIC2.66□□□□□ -1.98
CX3CL1P78423 RDM1-219ENST00000615378 542 ntTSL 3 BASIC2.66□□□□□ -1.98
CX3CL1P78423 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.66□□□□□ -1.98
CX3CL1P78423 AC002064.3-201ENST00000623448 346 ntBASIC2.66□□□□□ -1.98
CX3CL1P78423 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
CX3CL1P78423 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.66□□□□□ -1.98
CX3CL1P78423 AC093908.1-201ENST00000623125 8092 ntBASIC2.65□□□□□ -1.98
CX3CL1P78423 MTCO1P12-201ENST00000414273 1543 ntBASIC2.65□□□□□ -1.99
CX3CL1P78423 RNA5SP119-201ENST00000362715 117 ntBASIC2.65□□□□□ -1.99
CX3CL1P78423 Y_RNA.231-201ENST00000364358 102 ntBASIC2.65□□□□□ -1.99
CX3CL1P78423 RNU6-898P-201ENST00000365627 104 ntBASIC2.65□□□□□ -1.99
CX3CL1P78423 RNU6-1027P-201ENST00000383998 107 ntBASIC2.65□□□□□ -1.99
CX3CL1P78423 MIR490-201ENST00000384865 128 ntBASIC2.65□□□□□ -1.99
CX3CL1P78423 MIR518D-201ENST00000385014 87 ntBASIC2.65□□□□□ -1.99
CX3CL1P78423 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
CX3CL1P78423 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC2.65□□□□□ -1.99
CX3CL1P78423 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.65□□□□□ -1.99
CX3CL1P78423 OFD1P1Y-201ENST00000411756 1225 ntBASIC2.65□□□□□ -1.99
CX3CL1P78423 BX682237.1-201ENST00000415016 335 ntBASIC2.65□□□□□ -1.99
CX3CL1P78423 NDUFB4P5-201ENST00000415445 361 ntBASIC2.65□□□□□ -1.99
CX3CL1P78423 AL645937.1-202ENST00000421799 937 ntBASIC2.65□□□□□ -1.99
CX3CL1P78423 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.65□□□□□ -1.99
CX3CL1P78423 ATP6V0E1P4-201ENST00000427294 242 ntBASIC2.65□□□□□ -1.99
CX3CL1P78423 AL121601.2-201ENST00000438019 707 ntBASIC2.65□□□□□ -1.99
CX3CL1P78423 IGKV1OR-3-201ENST00000446944 348 ntBASIC2.65□□□□□ -1.99
CX3CL1P78423 VN1R34P-201ENST00000447387 883 ntBASIC2.65□□□□□ -1.99
CX3CL1P78423 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC2.65□□□□□ -1.99
CX3CL1P78423 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC2.65□□□□□ -1.99
CX3CL1P78423 RPL21P10-201ENST00000463521 490 ntBASIC2.65□□□□□ -1.99
CX3CL1P78423 DYNLL1P5-201ENST00000467158 270 ntBASIC2.65□□□□□ -1.99
CX3CL1P78423 RPL21P99-201ENST00000480369 423 ntBASIC2.65□□□□□ -1.99
CX3CL1P78423 AC093663.1-201ENST00000497190 394 ntBASIC2.65□□□□□ -1.99
CX3CL1P78423 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.65□□□□□ -1.99
CX3CL1P78423 MTND4LP22-201ENST00000508209 276 ntBASIC2.65□□□□□ -1.99
CX3CL1P78423 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.65□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms