Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
PEX3P56589 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
PEX3P56589 SNORD114-30-201ENST00000364448 72 ntBASIC2.6□□□□□ -1.99
PEX3P56589 Y_RNA.318-201ENST00000365131 97 ntBASIC2.6□□□□□ -1.99
PEX3P56589 RNU6-282P-201ENST00000365357 103 ntBASIC2.6□□□□□ -1.99
PEX3P56589 U8.8-201ENST00000365399 135 ntBASIC2.6□□□□□ -1.99
PEX3P56589 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.6□□□□□ -1.99
PEX3P56589 DEFA7P-201ENST00000382676 285 ntBASIC2.6□□□□□ -1.99
PEX3P56589 CD24P4-201ENST00000382840 243 ntBASIC2.6□□□□□ -1.99
PEX3P56589 RNU6-946P-201ENST00000383878 107 ntBASIC2.6□□□□□ -1.99
PEX3P56589 Y_RNA.534-201ENST00000384599 112 ntBASIC2.6□□□□□ -1.99
PEX3P56589 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
PEX3P56589 RPS4XP7-201ENST00000406274 780 ntBASIC2.6□□□□□ -1.99
PEX3P56589 RNU2-25P-201ENST00000411041 191 ntBASIC2.6□□□□□ -1.99
PEX3P56589 AC127391.1-201ENST00000411737 98 ntBASIC2.6□□□□□ -1.99
PEX3P56589 PIGFP2-201ENST00000421400 651 ntBASIC2.6□□□□□ -1.99
PEX3P56589 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC2.6□□□□□ -1.99
PEX3P56589 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC2.6□□□□□ -1.99
PEX3P56589 MYL8P-204ENST00000431574 518 ntBASIC2.6□□□□□ -1.99
PEX3P56589 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.6□□□□□ -1.99
PEX3P56589 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.6□□□□□ -1.99
PEX3P56589 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.6□□□□□ -1.99
PEX3P56589 AC128713.1-201ENST00000471495 306 ntBASIC2.6□□□□□ -1.99
PEX3P56589 AC105252.1-201ENST00000503089 286 ntBASIC2.6□□□□□ -1.99
PEX3P56589 AC009901.1-201ENST00000506703 541 ntBASIC2.6□□□□□ -1.99
PEX3P56589 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC2.6□□□□□ -1.99
PEX3P56589 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.6□□□□□ -1.99
PEX3P56589 OR5B19P-201ENST00000531766 928 ntBASIC2.6□□□□□ -1.99
PEX3P56589 AC087883.1-201ENST00000551882 391 ntBASIC2.6□□□□□ -1.99
PEX3P56589 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.6□□□□□ -1.99
PEX3P56589 AC068135.2-201ENST00000569293 1028 ntBASIC2.6□□□□□ -1.99
PEX3P56589 MIR4513-201ENST00000581077 86 ntBASIC2.6□□□□□ -1.99
PEX3P56589 AC087683.1-201ENST00000591187 441 ntBASIC2.6□□□□□ -1.99
PEX3P56589 AC007938.3-201ENST00000604965 623 ntBASIC2.6□□□□□ -1.99
PEX3P56589 FTX_3.1-201ENST00000610451 147 ntBASIC2.6□□□□□ -1.99
PEX3P56589 AL133173.2-201ENST00000614270 90 ntBASIC2.6□□□□□ -1.99
PEX3P56589 AC091834.1-201ENST00000614543 472 ntBASIC2.6□□□□□ -1.99
PEX3P56589 FRG1KP-201ENST00000623592 341 ntBASIC2.6□□□□□ -1.99
PEX3P56589 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.6□□□□□ -1.99
PEX3P56589 U2.21-201ENST00000637295 81 ntBASIC2.6□□□□□ -1.99
PEX3P56589 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
PEX3P56589 AC233263.6-201ENST00000631132 1963 ntBASIC2.6□□□□□ -1.99
PEX3P56589 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC2.59□□□□□ -1.99
PEX3P56589 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
PEX3P56589 UBE2L2-201ENST00000254302 429 ntBASIC2.59□□□□□ -1.99
PEX3P56589 RNU6-108P-201ENST00000365558 107 ntBASIC2.59□□□□□ -1.99
PEX3P56589 RNU6-74P-201ENST00000384235 107 ntBASIC2.59□□□□□ -1.99
PEX3P56589 RNU6-140P-201ENST00000384566 108 ntBASIC2.59□□□□□ -1.99
PEX3P56589 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC2.59□□□□□ -1.99
PEX3P56589 AC099548.1-201ENST00000421443 426 ntBASIC2.59□□□□□ -1.99
PEX3P56589 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC2.59□□□□□ -1.99
PEX3P56589 ZNF863P-201ENST00000426746 417 ntBASIC2.59□□□□□ -1.99
PEX3P56589 AC133104.1-201ENST00000429100 218 ntBASIC2.59□□□□□ -1.99
PEX3P56589 USP9YP14-201ENST00000430663 563 ntBASIC2.59□□□□□ -1.99
PEX3P56589 DNAJC19P4-201ENST00000440115 345 ntBASIC2.59□□□□□ -1.99
PEX3P56589 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
PEX3P56589 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
PEX3P56589 TPTE2P5-203ENST00000458118 728 ntBASIC2.59□□□□□ -1.99
PEX3P56589 MTND3P5-201ENST00000512798 333 ntBASIC2.59□□□□□ -1.99
PEX3P56589 SNORD27.1-201ENST00000516319 72 ntBASIC2.59□□□□□ -1.99
PEX3P56589 RNA5SP24-201ENST00000516478 95 ntBASIC2.59□□□□□ -1.99
PEX3P56589 RNU6-405P-201ENST00000516637 110 ntBASIC2.59□□□□□ -1.99
PEX3P56589 RNA5SP291-201ENST00000517222 105 ntBASIC2.59□□□□□ -1.99
PEX3P56589 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.59□□□□□ -1.99
PEX3P56589 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.59□□□□□ -1.99
PEX3P56589 AL512310.1-201ENST00000548639 172 ntBASIC2.59□□□□□ -1.99
PEX3P56589 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC2.59□□□□□ -1.99
PEX3P56589 AC103987.3-201ENST00000582071 292 ntBASIC2.59□□□□□ -1.99
PEX3P56589 AL121992.2-201ENST00000606262 256 ntBASIC2.59□□□□□ -1.99
PEX3P56589 AL589994.2-201ENST00000621124 579 ntBASIC2.59□□□□□ -1.99
PEX3P56589 AC002064.3-201ENST00000623448 346 ntBASIC2.59□□□□□ -1.99
PEX3P56589 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
PEX3P56589 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.59□□□□□ -1.99
PEX3P56589 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -2
PEX3P56589 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.59□□□□□ -2
PEX3P56589 AC006020.1-201ENST00000420179 1854 ntBASIC2.58□□□□□ -2
PEX3P56589 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
PEX3P56589 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
PEX3P56589 AC073343.1-201ENST00000328239 651 ntBASIC2.58□□□□□ -2
PEX3P56589 RNU1-51P-201ENST00000365345 176 ntBASIC2.58□□□□□ -2
PEX3P56589 Y_RNA.436-201ENST00000384097 102 ntBASIC2.58□□□□□ -2
PEX3P56589 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2.58□□□□□ -2
PEX3P56589 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.58□□□□□ -2
PEX3P56589 RNU2-66P-201ENST00000410650 161 ntBASIC2.58□□□□□ -2
PEX3P56589 RNU2-16P-201ENST00000410712 136 ntBASIC2.58□□□□□ -2
PEX3P56589 AL663109.1-201ENST00000411498 844 ntBASIC2.58□□□□□ -2
PEX3P56589 BX295541.1-201ENST00000417774 250 ntBASIC2.58□□□□□ -2
PEX3P56589 MORF4L1P6-201ENST00000418771 268 ntBASIC2.58□□□□□ -2
PEX3P56589 AC010975.2-201ENST00000427781 588 ntBASIC2.58□□□□□ -2
PEX3P56589 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC2.58□□□□□ -2
PEX3P56589 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC2.58□□□□□ -2
PEX3P56589 MTCO2P11-201ENST00000431069 680 ntBASIC2.58□□□□□ -2
PEX3P56589 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC2.58□□□□□ -2
PEX3P56589 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC2.58□□□□□ -2
PEX3P56589 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.58□□□□□ -2
PEX3P56589 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.58□□□□□ -2
PEX3P56589 AC008413.1-201ENST00000511864 177 ntBASIC2.58□□□□□ -2
PEX3P56589 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.58□□□□□ -2
PEX3P56589 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC2.58□□□□□ -2
PEX3P56589 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 121.5 ms