Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 AL451064.1-201ENST00000607718 471 ntBASIC2.64□□□□□ -1.99
CHRNA3P32297 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC2.64□□□□□ -1.99
CHRNA3P32297 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.64□□□□□ -1.99
CHRNA3P32297 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.64□□□□□ -1.99
CHRNA3P32297 AC010889.1-201ENST00000566193 2666 ntBASIC2.64□□□□□ -1.99
CHRNA3P32297 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
CHRNA3P32297 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
CHRNA3P32297 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.63□□□□□ -1.99
CHRNA3P32297 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.63□□□□□ -1.99
CHRNA3P32297 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.63□□□□□ -1.99
CHRNA3P32297 Y_RNA.46-201ENST00000362695 102 ntBASIC2.63□□□□□ -1.99
CHRNA3P32297 RNU5F-7P-201ENST00000363696 115 ntBASIC2.63□□□□□ -1.99
CHRNA3P32297 OR5H15-201ENST00000383696 930 ntBASIC2.63□□□□□ -1.99
CHRNA3P32297 RNU6-1083P-201ENST00000384022 107 ntBASIC2.63□□□□□ -1.99
CHRNA3P32297 RNU6-809P-201ENST00000384461 107 ntBASIC2.63□□□□□ -1.99
CHRNA3P32297 RNU6-297P-201ENST00000384636 107 ntBASIC2.63□□□□□ -1.99
CHRNA3P32297 AL139397.2-201ENST00000404529 772 ntBASIC2.63□□□□□ -1.99
CHRNA3P32297 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
CHRNA3P32297 AL162578.1-201ENST00000406202 378 ntBASIC2.63□□□□□ -1.99
CHRNA3P32297 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.63□□□□□ -1.99
CHRNA3P32297 MTCO3P41-201ENST00000414801 328 ntBASIC2.63□□□□□ -1.99
CHRNA3P32297 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC2.63□□□□□ -1.99
CHRNA3P32297 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC2.63□□□□□ -1.99
CHRNA3P32297 AL589823.1-201ENST00000429577 183 ntBASIC2.63□□□□□ -1.99
CHRNA3P32297 HMGB1P27-201ENST00000431429 603 ntBASIC2.63□□□□□ -1.99
CHRNA3P32297 FCF1P1-201ENST00000432690 571 ntBASIC2.63□□□□□ -1.99
CHRNA3P32297 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.63□□□□□ -1.99
CHRNA3P32297 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC2.63□□□□□ -1.99
CHRNA3P32297 AL590365.1-201ENST00000450788 243 ntBASIC2.63□□□□□ -1.99
CHRNA3P32297 AL033528.1-201ENST00000453780 140 ntBASIC2.63□□□□□ -1.99
CHRNA3P32297 MTCYBP1-201ENST00000454315 1119 ntBASIC2.63□□□□□ -1.99
CHRNA3P32297 RPS3P1-201ENST00000456781 192 ntBASIC2.63□□□□□ -1.99
CHRNA3P32297 AC128713.1-201ENST00000471495 306 ntBASIC2.63□□□□□ -1.99
CHRNA3P32297 EIF4EP3-201ENST00000498782 656 ntBASIC2.63□□□□□ -1.99
CHRNA3P32297 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC2.63□□□□□ -1.99
CHRNA3P32297 RNA5SP148-201ENST00000516527 94 ntBASIC2.63□□□□□ -1.99
CHRNA3P32297 RNU6-405P-201ENST00000516637 110 ntBASIC2.63□□□□□ -1.99
CHRNA3P32297 RNA5SP471-201ENST00000516971 106 ntBASIC2.63□□□□□ -1.99
CHRNA3P32297 AC109329.2-201ENST00000519658 482 ntBASIC2.63□□□□□ -1.99
CHRNA3P32297 MTND4LP18-201ENST00000526864 291 ntBASIC2.63□□□□□ -1.99
CHRNA3P32297 AC243972.3-201ENST00000539655 198 ntBASIC2.63□□□□□ -1.99
CHRNA3P32297 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC2.63□□□□□ -1.99
CHRNA3P32297 AC234778.2-201ENST00000566241 354 ntBASIC2.63□□□□□ -1.99
CHRNA3P32297 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC2.63□□□□□ -1.99
CHRNA3P32297 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.63□□□□□ -1.99
CHRNA3P32297 BNIP3P8-201ENST00000597863 560 ntBASIC2.63□□□□□ -1.99
CHRNA3P32297 AC078795.2-201ENST00000602835 1252 ntBASIC2.63□□□□□ -1.99
CHRNA3P32297 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC2.63□□□□□ -1.99
CHRNA3P32297 AC087241.4-201ENST00000612441 480 ntBASIC2.63□□□□□ -1.99
CHRNA3P32297 AP001506.1-201ENST00000615444 211 ntBASIC2.63□□□□□ -1.99
CHRNA3P32297 AL136313.1-201ENST00000624804 202 ntBASIC2.63□□□□□ -1.99
CHRNA3P32297 MIR3199-2-201ENST00000636243 86 ntBASIC2.63□□□□□ -1.99
CHRNA3P32297 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.63□□□□□ -1.99
CHRNA3P32297 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
CHRNA3P32297 AL139095.1-201ENST00000404326 391 ntBASIC2.62□□□□□ -1.99
CHRNA3P32297 AC078974.1-201ENST00000411597 223 ntBASIC2.62□□□□□ -1.99
CHRNA3P32297 RPS3AP3-201ENST00000411933 242 ntBASIC2.62□□□□□ -1.99
CHRNA3P32297 ZNF885P-201ENST00000420174 1098 ntBASIC2.62□□□□□ -1.99
CHRNA3P32297 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.62□□□□□ -1.99
CHRNA3P32297 AC104651.1-201ENST00000427559 735 ntBASIC2.62□□□□□ -1.99
CHRNA3P32297 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
CHRNA3P32297 MTND1P34-201ENST00000438556 671 ntBASIC2.62□□□□□ -1.99
CHRNA3P32297 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC2.62□□□□□ -1.99
CHRNA3P32297 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.62□□□□□ -1.99
CHRNA3P32297 AL022238.1-201ENST00000442557 355 ntBASIC2.62□□□□□ -1.99
CHRNA3P32297 MTND6P13-201ENST00000443510 523 ntBASIC2.62□□□□□ -1.99
CHRNA3P32297 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC2.62□□□□□ -1.99
CHRNA3P32297 AC233279.1-201ENST00000455300 423 ntBASIC2.62□□□□□ -1.99
CHRNA3P32297 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.62□□□□□ -1.99
CHRNA3P32297 TPT1P7-201ENST00000458300 517 ntBASIC2.62□□□□□ -1.99
CHRNA3P32297 snoU109.1-201ENST00000459339 135 ntBASIC2.62□□□□□ -1.99
CHRNA3P32297 NDUFB4P2-201ENST00000509515 391 ntBASIC2.62□□□□□ -1.99
CHRNA3P32297 AC008716.1-201ENST00000511084 513 ntBASIC2.62□□□□□ -1.99
CHRNA3P32297 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.62□□□□□ -1.99
CHRNA3P32297 SNORD19.2-201ENST00000516978 73 ntBASIC2.62□□□□□ -1.99
CHRNA3P32297 AP003122.4-201ENST00000530980 758 ntBASIC2.62□□□□□ -1.99
CHRNA3P32297 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.62□□□□□ -1.99
CHRNA3P32297 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.62□□□□□ -1.99
CHRNA3P32297 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.62□□□□□ -1.99
CHRNA3P32297 EIF1P4-201ENST00000572664 335 ntBASIC2.62□□□□□ -1.99
CHRNA3P32297 AC007151.1-201ENST00000572774 483 ntBASIC2.62□□□□□ -1.99
CHRNA3P32297 AC009977.1-201ENST00000586015 570 ntBASIC2.62□□□□□ -1.99
CHRNA3P32297 AC103591.3-201ENST00000608684 209 ntBASIC2.62□□□□□ -1.99
CHRNA3P32297 AL355472.4-201ENST00000610233 626 ntBASIC2.62□□□□□ -1.99
CHRNA3P32297 AC090970.3-201ENST00000612566 866 ntBASIC2.62□□□□□ -1.99
CHRNA3P32297 AL589743.7-201ENST00000612637 233 ntBASIC2.62□□□□□ -1.99
CHRNA3P32297 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
CHRNA3P32297 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
CHRNA3P32297 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
CHRNA3P32297 AC004520.1-201ENST00000608362 1413 ntBASIC2.61□□□□□ -1.99
CHRNA3P32297 UBE2L2-201ENST00000254302 429 ntBASIC2.61□□□□□ -1.99
CHRNA3P32297 RNU4-82P-201ENST00000362443 140 ntBASIC2.61□□□□□ -1.99
CHRNA3P32297 RNA5SP456-201ENST00000364002 114 ntBASIC2.61□□□□□ -1.99
CHRNA3P32297 U3.12-201ENST00000364498 214 ntBASIC2.61□□□□□ -1.99
CHRNA3P32297 SNORA40.3-201ENST00000390964 122 ntBASIC2.61□□□□□ -1.99
CHRNA3P32297 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
CHRNA3P32297 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC2.61□□□□□ -1.99
CHRNA3P32297 DLGAP5P1-201ENST00000430307 464 ntBASIC2.61□□□□□ -1.99
CHRNA3P32297 RPL36AP53-201ENST00000432891 316 ntBASIC2.61□□□□□ -1.99
CHRNA3P32297 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC2.61□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms