Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 RNU6-955P-201ENST00000410497 104 ntBASIC1.06□□□□□ -2.24
FREM3P0C091 AL158823.1-201ENST00000418441 478 ntBASIC1.06□□□□□ -2.24
FREM3P0C091 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC1.06□□□□□ -2.24
FREM3P0C091 KATNBL1P6-201ENST00000453433 915 ntBASIC1.06□□□□□ -2.24
FREM3P0C091 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC1.06□□□□□ -2.24
FREM3P0C091 AC010460.2-201ENST00000509054 677 ntBASIC1.06□□□□□ -2.24
FREM3P0C091 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.06□□□□□ -2.24
FREM3P0C091 SNORA4.4-201ENST00000515921 135 ntBASIC1.06□□□□□ -2.24
FREM3P0C091 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.06□□□□□ -2.24
FREM3P0C091 AC090502.2-201ENST00000549267 280 ntBASIC1.06□□□□□ -2.24
FREM3P0C091 AL121821.2-201ENST00000556081 394 ntBASIC1.06□□□□□ -2.24
FREM3P0C091 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC1.06□□□□□ -2.24
FREM3P0C091 RN7SL622P-201ENST00000585292 275 ntBASIC1.06□□□□□ -2.24
FREM3P0C091 AL078603.1-201ENST00000603824 313 ntBASIC1.06□□□□□ -2.24
FREM3P0C091 AC004805.2-201ENST00000605382 482 ntBASIC1.06□□□□□ -2.24
FREM3P0C091 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC1.06□□□□□ -2.24
FREM3P0C091 AC010133.1-201ENST00000615809 842 ntBASIC1.06□□□□□ -2.24
FREM3P0C091 AC022709.1-201ENST00000615967 87 ntBASIC1.06□□□□□ -2.24
FREM3P0C091 AC079416.3-201ENST00000624479 549 ntBASIC1.06□□□□□ -2.24
FREM3P0C091 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC1.05□□□□□ -2.24
FREM3P0C091 AL138713.1-201ENST00000624026 2130 ntBASIC1.05□□□□□ -2.24
FREM3P0C091 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.05□□□□□ -2.24
FREM3P0C091 SFR1P2-201ENST00000421841 730 ntBASIC1.05□□□□□ -2.24
FREM3P0C091 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC1.05□□□□□ -2.24
FREM3P0C091 RNFT1P2-201ENST00000443064 757 ntBASIC1.05□□□□□ -2.24
FREM3P0C091 RPS29P28-201ENST00000446439 141 ntBASIC1.05□□□□□ -2.24
FREM3P0C091 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC1.05□□□□□ -2.24
FREM3P0C091 RNU1-98P-201ENST00000458992 160 ntBASIC1.05□□□□□ -2.24
FREM3P0C091 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC1.05□□□□□ -2.24
FREM3P0C091 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC1.05□□□□□ -2.24
FREM3P0C091 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC1.05□□□□□ -2.24
FREM3P0C091 RPL21P5-201ENST00000554662 472 ntBASIC1.05□□□□□ -2.24
FREM3P0C091 MIR5000-201ENST00000577717 103 ntBASIC1.05□□□□□ -2.24
FREM3P0C091 AL355802.4-201ENST00000607635 548 ntBASIC1.05□□□□□ -2.24
FREM3P0C091 AC243773.3-201ENST00000613270 256 ntBASIC1.05□□□□□ -2.24
FREM3P0C091 AC016911.1-201ENST00000613297 452 ntBASIC1.05□□□□□ -2.24
FREM3P0C091 AL773524.1-201ENST00000614065 229 ntBASIC1.05□□□□□ -2.24
FREM3P0C091 MIR3199-2-201ENST00000636243 86 ntBASIC1.05□□□□□ -2.24
FREM3P0C091 RNU6-1080P-201ENST00000383982 107 ntBASIC1.04□□□□□ -2.24
FREM3P0C091 RNU6-748P-201ENST00000384648 107 ntBASIC1.04□□□□□ -2.24
FREM3P0C091 MIR150-201ENST00000385048 84 ntBASIC1.04□□□□□ -2.24
FREM3P0C091 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC1.04□□□□□ -2.24
FREM3P0C091 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC1.04□□□□□ -2.24
FREM3P0C091 AC112771.1-201ENST00000463581 102 ntBASIC1.04□□□□□ -2.24
FREM3P0C091 AC117503.1-201ENST00000472241 394 ntBASIC1.04□□□□□ -2.24
FREM3P0C091 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.04□□□□□ -2.24
FREM3P0C091 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.04□□□□□ -2.24
FREM3P0C091 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.04□□□□□ -2.24
FREM3P0C091 AP000403.1-201ENST00000603349 851 ntBASIC1.04□□□□□ -2.24
FREM3P0C091 AC011451.2-201ENST00000604303 598 ntBASIC1.04□□□□□ -2.24
FREM3P0C091 AC123912.5-201ENST00000605470 343 ntBASIC1.04□□□□□ -2.24
FREM3P0C091 MIR5739-201ENST00000619803 80 ntBASIC1.04□□□□□ -2.24
FREM3P0C091 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.04□□□□□ -2.24
FREM3P0C091 SNORA23-201ENST00000365128 182 ntBASIC1.04□□□□□ -2.24
FREM3P0C091 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC1.04□□□□□ -2.24
FREM3P0C091 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
FREM3P0C091 HMGN2P10-201ENST00000448085 265 ntBASIC1.04□□□□□ -2.24
FREM3P0C091 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC1.04□□□□□ -2.24
FREM3P0C091 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC1.04□□□□□ -2.24
FREM3P0C091 AC006512.1-201ENST00000468816 291 ntBASIC1.04□□□□□ -2.24
FREM3P0C091 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC1.04□□□□□ -2.24
FREM3P0C091 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC1.04□□□□□ -2.24
FREM3P0C091 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.04□□□□□ -2.24
FREM3P0C091 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC1.04□□□□□ -2.24
FREM3P0C091 NACAP3-201ENST00000552100 481 ntBASIC1.04□□□□□ -2.24
FREM3P0C091 AC021739.1-201ENST00000559631 174 ntBASIC1.04□□□□□ -2.24
FREM3P0C091 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC1.04□□□□□ -2.24
FREM3P0C091 MIR4285-201ENST00000581001 85 ntBASIC1.04□□□□□ -2.24
FREM3P0C091 AL390208.1-201ENST00000605885 644 ntBASIC1.04□□□□□ -2.24
FREM3P0C091 AL603758.1-201ENST00000618654 241 ntBASIC1.04□□□□□ -2.24
FREM3P0C091 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
FREM3P0C091 SLC10A5P1-201ENST00000379063 1306 ntBASIC1.03□□□□□ -2.24
FREM3P0C091 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC1.03□□□□□ -2.24
FREM3P0C091 RNU6-486P-201ENST00000363116 107 ntBASIC1.03□□□□□ -2.24
FREM3P0C091 RNY1-201ENST00000364228 113 ntBASIC1.03□□□□□ -2.24
FREM3P0C091 RNU4-42P-201ENST00000364738 142 ntBASIC1.03□□□□□ -2.24
FREM3P0C091 SNORA40.6-201ENST00000391153 128 ntBASIC1.03□□□□□ -2.24
FREM3P0C091 AC068050.1-201ENST00000394891 380 ntBASIC1.03□□□□□ -2.24
FREM3P0C091 AL590084.1-201ENST00000407885 387 ntBASIC1.03□□□□□ -2.24
FREM3P0C091 RNU2-42P-201ENST00000410697 113 ntBASIC1.03□□□□□ -2.24
FREM3P0C091 AL161449.1-201ENST00000414531 1199 ntBASIC1.03□□□□□ -2.24
FREM3P0C091 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC1.03□□□□□ -2.24
FREM3P0C091 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC1.03□□□□□ -2.24
FREM3P0C091 MTCYBP15-201ENST00000433123 1127 ntBASIC1.03□□□□□ -2.24
FREM3P0C091 RSU1P2-202ENST00000437884 485 ntBASIC1.03□□□□□ -2.24
FREM3P0C091 AC002381.1-201ENST00000447049 280 ntBASIC1.03□□□□□ -2.24
FREM3P0C091 AC005297.2-201ENST00000450430 606 ntBASIC1.03□□□□□ -2.24
FREM3P0C091 RPS29P1-201ENST00000465274 159 ntBASIC1.03□□□□□ -2.24
FREM3P0C091 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC1.03□□□□□ -2.24
FREM3P0C091 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
FREM3P0C091 AC091965.2-201ENST00000512324 613 ntBASIC1.03□□□□□ -2.24
FREM3P0C091 AP004247.1-201ENST00000531556 1289 ntBASIC1.03□□□□□ -2.24
FREM3P0C091 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC1.03□□□□□ -2.24
FREM3P0C091 AC006518.2-201ENST00000542513 940 ntBASIC1.03□□□□□ -2.24
FREM3P0C091 ROCK1P1-201ENST00000573767 549 ntBASIC1.03□□□□□ -2.24
FREM3P0C091 AC090079.2-201ENST00000575289 768 ntBASIC1.03□□□□□ -2.24
FREM3P0C091 MIR4666A-201ENST00000580160 79 ntBASIC1.03□□□□□ -2.24
FREM3P0C091 FAM106DP-201ENST00000586416 501 ntBASIC1.03□□□□□ -2.24
FREM3P0C091 AL133216.2-202ENST00000634512 349 ntBASIC1.03□□□□□ -2.24
FREM3P0C091 SUCLA2P2-201ENST00000417269 1309 ntBASIC1.03□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms