Protein–RNA interactions for Protein: Q9Y6N9

USH1C, Harmonin, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1CQ9Y6N9 HMGN2P3-201ENST00000433603 273 ntBASIC1.72□□□□□ -2.13
USH1CQ9Y6N9 HMGN2P5-201ENST00000436882 273 ntBASIC1.72□□□□□ -2.13
USH1CQ9Y6N9 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
USH1CQ9Y6N9 ELOCP30-201ENST00000447108 299 ntBASIC1.72□□□□□ -2.13
USH1CQ9Y6N9 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.72□□□□□ -2.13
USH1CQ9Y6N9 OR6C5P-201ENST00000452388 923 ntBASIC1.72□□□□□ -2.13
USH1CQ9Y6N9 AC092001.1-201ENST00000453012 261 ntBASIC1.72□□□□□ -2.13
USH1CQ9Y6N9 snoU13.23-201ENST00000458863 104 ntBASIC1.72□□□□□ -2.13
USH1CQ9Y6N9 RPL23AP42-201ENST00000471152 471 ntBASIC1.72□□□□□ -2.13
USH1CQ9Y6N9 RPL36AP48-201ENST00000485521 314 ntBASIC1.72□□□□□ -2.13
USH1CQ9Y6N9 AC139453.3-201ENST00000493276 369 ntBASIC1.72□□□□□ -2.13
USH1CQ9Y6N9 RNU6-237P-201ENST00000515985 71 ntBASIC1.72□□□□□ -2.13
USH1CQ9Y6N9 RN7SKP258-201ENST00000517151 304 ntBASIC1.72□□□□□ -2.13
USH1CQ9Y6N9 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC1.72□□□□□ -2.13
USH1CQ9Y6N9 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.72□□□□□ -2.13
USH1CQ9Y6N9 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.72□□□□□ -2.13
USH1CQ9Y6N9 AC104581.2-201ENST00000572227 430 ntBASIC1.72□□□□□ -2.13
USH1CQ9Y6N9 AP001269.3-201ENST00000588718 329 ntBASIC1.72□□□□□ -2.13
USH1CQ9Y6N9 AC068620.3-201ENST00000602749 560 ntBASIC1.72□□□□□ -2.13
USH1CQ9Y6N9 AC024060.1-201ENST00000607052 494 ntBASIC1.72□□□□□ -2.13
USH1CQ9Y6N9 AC112204.3-201ENST00000623822 332 ntBASIC1.72□□□□□ -2.13
USH1CQ9Y6N9 AC097655.1-201ENST00000635075 318 ntBASIC1.72□□□□□ -2.13
USH1CQ9Y6N9 AC002543.1-201ENST00000299783 1954 ntBASIC1.72□□□□□ -2.13
USH1CQ9Y6N9 ZNF702P-202ENST00000434269 1966 ntBASIC1.72□□□□□ -2.13
USH1CQ9Y6N9 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
USH1CQ9Y6N9 RNU6-1159P-201ENST00000362933 107 ntBASIC1.71□□□□□ -2.14
USH1CQ9Y6N9 RNU6-777P-201ENST00000364265 104 ntBASIC1.71□□□□□ -2.14
USH1CQ9Y6N9 RNU6-997P-201ENST00000384725 107 ntBASIC1.71□□□□□ -2.14
USH1CQ9Y6N9 U8.14-201ENST00000390843 143 ntBASIC1.71□□□□□ -2.14
USH1CQ9Y6N9 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC1.71□□□□□ -2.14
USH1CQ9Y6N9 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC1.71□□□□□ -2.14
USH1CQ9Y6N9 ISCA1P1-201ENST00000426679 387 ntBASIC1.71□□□□□ -2.14
USH1CQ9Y6N9 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC1.71□□□□□ -2.14
USH1CQ9Y6N9 AC009238.1-201ENST00000442165 424 ntBASIC1.71□□□□□ -2.14
USH1CQ9Y6N9 AC009237.6-201ENST00000446969 424 ntBASIC1.71□□□□□ -2.14
USH1CQ9Y6N9 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
USH1CQ9Y6N9 AL441985.1-201ENST00000457727 251 ntBASIC1.71□□□□□ -2.14
USH1CQ9Y6N9 RPS29P11-201ENST00000496507 171 ntBASIC1.71□□□□□ -2.14
USH1CQ9Y6N9 SUMO2P5-201ENST00000506790 245 ntBASIC1.71□□□□□ -2.14
USH1CQ9Y6N9 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC1.71□□□□□ -2.14
USH1CQ9Y6N9 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC1.71□□□□□ -2.14
USH1CQ9Y6N9 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC1.71□□□□□ -2.14
USH1CQ9Y6N9 BNIP3P26-201ENST00000600827 554 ntBASIC1.71□□□□□ -2.14
USH1CQ9Y6N9 AC006270.3-201ENST00000605967 1036 ntBASIC1.71□□□□□ -2.14
USH1CQ9Y6N9 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC1.71□□□□□ -2.14
USH1CQ9Y6N9 AF129408.1-201ENST00000608767 431 ntBASIC1.71□□□□□ -2.14
USH1CQ9Y6N9 MIR5739-201ENST00000619803 80 ntBASIC1.71□□□□□ -2.14
USH1CQ9Y6N9 AC123767.1-202ENST00000620407 817 ntBASIC1.71□□□□□ -2.14
USH1CQ9Y6N9 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC1.71□□□□□ -2.14
USH1CQ9Y6N9 AP000676.3-201ENST00000623299 569 ntBASIC1.71□□□□□ -2.14
USH1CQ9Y6N9 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
USH1CQ9Y6N9 DDX43P2-201ENST00000604753 1354 ntBASIC1.71□□□□□ -2.14
USH1CQ9Y6N9 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC1.7□□□□□ -2.14
USH1CQ9Y6N9 AC019129.1-201ENST00000403786 261 ntBASIC1.7□□□□□ -2.14
USH1CQ9Y6N9 MIR1289-2-201ENST00000408360 111 ntBASIC1.7□□□□□ -2.14
USH1CQ9Y6N9 AC069282.1-201ENST00000411911 526 ntBASIC1.7□□□□□ -2.14
USH1CQ9Y6N9 USP9YP6-201ENST00000413550 854 ntBASIC1.7□□□□□ -2.14
USH1CQ9Y6N9 AC097463.2-201ENST00000421074 142 ntBASIC1.7□□□□□ -2.14
USH1CQ9Y6N9 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC1.7□□□□□ -2.14
USH1CQ9Y6N9 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC1.7□□□□□ -2.14
USH1CQ9Y6N9 AC104651.1-201ENST00000427559 735 ntBASIC1.7□□□□□ -2.14
USH1CQ9Y6N9 AC003989.2-201ENST00000440224 169 ntBASIC1.7□□□□□ -2.14
USH1CQ9Y6N9 EEF1E1P1-201ENST00000446998 430 ntBASIC1.7□□□□□ -2.14
USH1CQ9Y6N9 FABP5P13-201ENST00000452144 328 ntBASIC1.7□□□□□ -2.14
USH1CQ9Y6N9 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.7□□□□□ -2.14
USH1CQ9Y6N9 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC1.7□□□□□ -2.14
USH1CQ9Y6N9 MTND1P16-201ENST00000465177 898 ntBASIC1.7□□□□□ -2.14
USH1CQ9Y6N9 AC068587.2-201ENST00000478386 781 ntBASIC1.7□□□□□ -2.14
USH1CQ9Y6N9 RPL38P4-201ENST00000502376 214 ntBASIC1.7□□□□□ -2.14
USH1CQ9Y6N9 AC020699.1-201ENST00000505161 445 ntBASIC1.7□□□□□ -2.14
USH1CQ9Y6N9 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.7□□□□□ -2.14
USH1CQ9Y6N9 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.7□□□□□ -2.14
USH1CQ9Y6N9 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC1.7□□□□□ -2.14
USH1CQ9Y6N9 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC1.7□□□□□ -2.14
USH1CQ9Y6N9 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC1.7□□□□□ -2.14
USH1CQ9Y6N9 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC1.7□□□□□ -2.14
USH1CQ9Y6N9 BNIP3P23-201ENST00000599655 511 ntBASIC1.7□□□□□ -2.14
USH1CQ9Y6N9 AL133445.2-201ENST00000611191 527 ntBASIC1.7□□□□□ -2.14
USH1CQ9Y6N9 RNU6-1192P-201ENST00000612197 107 ntBASIC1.7□□□□□ -2.14
USH1CQ9Y6N9 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC1.7□□□□□ -2.14
USH1CQ9Y6N9 AC022202.1-201ENST00000613515 211 ntBASIC1.7□□□□□ -2.14
USH1CQ9Y6N9 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC1.7□□□□□ -2.14
USH1CQ9Y6N9 AC005296.1-201ENST00000616145 209 ntBASIC1.7□□□□□ -2.14
USH1CQ9Y6N9 RNU6-489P-201ENST00000618289 107 ntBASIC1.7□□□□□ -2.14
USH1CQ9Y6N9 PCMTD1P7-201ENST00000634506 357 ntBASIC1.7□□□□□ -2.14
USH1CQ9Y6N9 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
USH1CQ9Y6N9 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
USH1CQ9Y6N9 AL353689.1-201ENST00000438895 199 ntBASIC1.69□□□□□ -2.14
USH1CQ9Y6N9 DNAJC19P4-201ENST00000440115 345 ntBASIC1.69□□□□□ -2.14
USH1CQ9Y6N9 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
USH1CQ9Y6N9 AKIRIN2P1-201ENST00000505898 352 ntBASIC1.69□□□□□ -2.14
USH1CQ9Y6N9 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.69□□□□□ -2.14
USH1CQ9Y6N9 AC012435.1-202ENST00000568772 240 ntBASIC1.69□□□□□ -2.14
USH1CQ9Y6N9 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC1.69□□□□□ -2.14
USH1CQ9Y6N9 AC012213.3-201ENST00000577199 777 ntBASIC1.69□□□□□ -2.14
USH1CQ9Y6N9 AC005034.5-201ENST00000604219 466 ntBASIC1.69□□□□□ -2.14
USH1CQ9Y6N9 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
USH1CQ9Y6N9 U6.99-201ENST00000637524 83 ntBASIC1.69□□□□□ -2.14
USH1CQ9Y6N9 AC008555.8-201ENST00000623602 2168 ntBASIC1.69□□□□□ -2.14
USH1CQ9Y6N9 AP000648.3-201ENST00000623539 4507 ntBASIC1.68□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 145.8 ms