Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.2□□□□□ -1.9
SNX9Q9Y5X1 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.2□□□□□ -1.9
SNX9Q9Y5X1 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
SNX9Q9Y5X1 U3.6-201ENST00000363622 211 ntBASIC3.2□□□□□ -1.9
SNX9Q9Y5X1 SNORA62.1-201ENST00000364287 154 ntBASIC3.2□□□□□ -1.9
SNX9Q9Y5X1 SNORD115-7-201ENST00000365306 82 ntBASIC3.2□□□□□ -1.9
SNX9Q9Y5X1 RNU6-877P-201ENST00000383868 107 ntBASIC3.2□□□□□ -1.9
SNX9Q9Y5X1 RNU6-641P-201ENST00000384006 107 ntBASIC3.2□□□□□ -1.9
SNX9Q9Y5X1 MT-TL1-201ENST00000386347 75 ntBASIC3.2□□□□□ -1.9
SNX9Q9Y5X1 UBA52P6-201ENST00000399822 382 ntBASIC3.2□□□□□ -1.9
SNX9Q9Y5X1 NDUFS5P1-201ENST00000405668 289 ntBASIC3.2□□□□□ -1.9
SNX9Q9Y5X1 RNA5SP274-201ENST00000410484 108 ntBASIC3.2□□□□□ -1.9
SNX9Q9Y5X1 OR9R1P-201ENST00000412200 877 ntBASIC3.2□□□□□ -1.9
SNX9Q9Y5X1 MTCYBP8-201ENST00000422855 651 ntBASIC3.2□□□□□ -1.9
SNX9Q9Y5X1 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC3.2□□□□□ -1.9
SNX9Q9Y5X1 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC3.2□□□□□ -1.9
SNX9Q9Y5X1 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.2□□□□□ -1.9
SNX9Q9Y5X1 SEPT14P3-201ENST00000439401 183 ntBASIC3.2□□□□□ -1.9
SNX9Q9Y5X1 AL732372.2-207ENST00000445840 183 ntBASIC3.2□□□□□ -1.9
SNX9Q9Y5X1 SEPT14P2-201ENST00000453405 183 ntBASIC3.2□□□□□ -1.9
SNX9Q9Y5X1 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC3.2□□□□□ -1.9
SNX9Q9Y5X1 RNU7-63P-201ENST00000459054 62 ntBASIC3.2□□□□□ -1.9
SNX9Q9Y5X1 AC146507.2-201ENST00000460608 476 ntBASIC3.2□□□□□ -1.9
SNX9Q9Y5X1 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.2□□□□□ -1.9
SNX9Q9Y5X1 RN7SL432P-201ENST00000484057 298 ntBASIC3.2□□□□□ -1.9
SNX9Q9Y5X1 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC3.2□□□□□ -1.9
SNX9Q9Y5X1 SEPT14P4-201ENST00000513445 186 ntBASIC3.2□□□□□ -1.9
SNX9Q9Y5X1 RN7SKP258-201ENST00000517151 304 ntBASIC3.2□□□□□ -1.9
SNX9Q9Y5X1 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.2□□□□□ -1.9
SNX9Q9Y5X1 FO082796.1-201ENST00000523795 183 ntBASIC3.2□□□□□ -1.9
SNX9Q9Y5X1 DNAJC8P1-201ENST00000554535 372 ntBASIC3.2□□□□□ -1.9
SNX9Q9Y5X1 AC060780.3-201ENST00000589464 80 ntBASIC3.2□□□□□ -1.9
SNX9Q9Y5X1 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.2□□□□□ -1.9
SNX9Q9Y5X1 AL670379.6-201ENST00000603753 252 ntBASIC3.2□□□□□ -1.9
SNX9Q9Y5X1 AL670379.11-201ENST00000604059 253 ntBASIC3.2□□□□□ -1.9
SNX9Q9Y5X1 AC008162.1-201ENST00000604718 254 ntBASIC3.2□□□□□ -1.9
SNX9Q9Y5X1 AL670379.1-201ENST00000604752 252 ntBASIC3.2□□□□□ -1.9
SNX9Q9Y5X1 AL670379.5-201ENST00000605253 252 ntBASIC3.2□□□□□ -1.9
SNX9Q9Y5X1 AL670379.12-201ENST00000605291 253 ntBASIC3.2□□□□□ -1.9
SNX9Q9Y5X1 AL670379.8-201ENST00000605353 252 ntBASIC3.2□□□□□ -1.9
SNX9Q9Y5X1 AL670379.7-201ENST00000605823 252 ntBASIC3.2□□□□□ -1.9
SNX9Q9Y5X1 AC135507.2-201ENST00000612443 309 ntBASIC3.2□□□□□ -1.9
SNX9Q9Y5X1 SDR42E1P2-201ENST00000614861 481 ntBASIC3.2□□□□□ -1.9
SNX9Q9Y5X1 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC3.2□□□□□ -1.9
SNX9Q9Y5X1 AC010338.1-201ENST00000621823 717 ntBASIC3.2□□□□□ -1.9
SNX9Q9Y5X1 FRG1KP-201ENST00000623592 341 ntBASIC3.2□□□□□ -1.9
SNX9Q9Y5X1 MIR3662-201ENST00000637030 95 ntBASIC3.2□□□□□ -1.9
SNX9Q9Y5X1 API5P2-201ENST00000397055 1498 ntBASIC3.2□□□□□ -1.9
SNX9Q9Y5X1 AC233263.6-201ENST00000631132 1963 ntBASIC3.2□□□□□ -1.9
SNX9Q9Y5X1 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SNX9Q9Y5X1 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.19□□□□□ -1.9
SNX9Q9Y5X1 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
SNX9Q9Y5X1 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.19□□□□□ -1.9
SNX9Q9Y5X1 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
SNX9Q9Y5X1 RNU6-867P-201ENST00000364956 107 ntBASIC3.19□□□□□ -1.9
SNX9Q9Y5X1 U8.9-201ENST00000365667 134 ntBASIC3.19□□□□□ -1.9
SNX9Q9Y5X1 RNU6-946P-201ENST00000383878 107 ntBASIC3.19□□□□□ -1.9
SNX9Q9Y5X1 RNU6-903P-201ENST00000391270 109 ntBASIC3.19□□□□□ -1.9
SNX9Q9Y5X1 SNORA26.7-201ENST00000391288 122 ntBASIC3.19□□□□□ -1.9
SNX9Q9Y5X1 RPL21P3-201ENST00000395517 478 ntBASIC3.19□□□□□ -1.9
SNX9Q9Y5X1 UBE2V1P2-201ENST00000397758 440 ntBASIC3.19□□□□□ -1.9
SNX9Q9Y5X1 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SNX9Q9Y5X1 AL078595.1-201ENST00000404458 226 ntBASIC3.19□□□□□ -1.9
SNX9Q9Y5X1 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.19□□□□□ -1.9
SNX9Q9Y5X1 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC3.19□□□□□ -1.9
SNX9Q9Y5X1 AL139413.1-201ENST00000421309 217 ntBASIC3.19□□□□□ -1.9
SNX9Q9Y5X1 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC3.19□□□□□ -1.9
SNX9Q9Y5X1 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.19□□□□□ -1.9
SNX9Q9Y5X1 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC3.19□□□□□ -1.9
SNX9Q9Y5X1 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.19□□□□□ -1.9
SNX9Q9Y5X1 RPL21P2-201ENST00000440049 481 ntBASIC3.19□□□□□ -1.9
SNX9Q9Y5X1 RPS29P15-201ENST00000458329 171 ntBASIC3.19□□□□□ -1.9
SNX9Q9Y5X1 RNU7-182P-201ENST00000459009 62 ntBASIC3.19□□□□□ -1.9
SNX9Q9Y5X1 VN1R104P-201ENST00000505115 1009 ntBASIC3.19□□□□□ -1.9
SNX9Q9Y5X1 AC098591.2-201ENST00000510152 315 ntBASIC3.19□□□□□ -1.9
SNX9Q9Y5X1 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.19□□□□□ -1.9
SNX9Q9Y5X1 RNU4ATAC8P-201ENST00000516196 109 ntBASIC3.19□□□□□ -1.9
SNX9Q9Y5X1 SNORA20.3-201ENST00000516880 132 ntBASIC3.19□□□□□ -1.9
SNX9Q9Y5X1 SUB1P1-201ENST00000524415 382 ntBASIC3.19□□□□□ -1.9
SNX9Q9Y5X1 AF235103.2-201ENST00000525753 346 ntBASIC3.19□□□□□ -1.9
SNX9Q9Y5X1 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC3.19□□□□□ -1.9
SNX9Q9Y5X1 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3.19□□□□□ -1.9
SNX9Q9Y5X1 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.19□□□□□ -1.9
SNX9Q9Y5X1 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.19□□□□□ -1.9
SNX9Q9Y5X1 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.19□□□□□ -1.9
SNX9Q9Y5X1 AC007619.2-201ENST00000605743 379 ntBASIC3.19□□□□□ -1.9
SNX9Q9Y5X1 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC3.19□□□□□ -1.9
SNX9Q9Y5X1 AC092794.2-201ENST00000620933 563 ntBASIC3.19□□□□□ -1.9
SNX9Q9Y5X1 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.19□□□□□ -1.9
SNX9Q9Y5X1 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
SNX9Q9Y5X1 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.19□□□□□ -1.9
SNX9Q9Y5X1 CASC19-280ENST00000642102 1351 ntBASIC3.19□□□□□ -1.9
SNX9Q9Y5X1 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SNX9Q9Y5X1 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
SNX9Q9Y5X1 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
SNX9Q9Y5X1 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.19□□□□□ -1.9
SNX9Q9Y5X1 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
SNX9Q9Y5X1 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
SNX9Q9Y5X1 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SNX9Q9Y5X1 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 115.1 ms