Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 RNU6-778P-201ENST00000363269 103 ntBASIC3.77□□□□□ -1.81
PCDHGA3Q9Y5H0 SNORD35B-201ENST00000363660 87 ntBASIC3.77□□□□□ -1.81
PCDHGA3Q9Y5H0 SNORD14B-201ENST00000364533 90 ntBASIC3.77□□□□□ -1.81
PCDHGA3Q9Y5H0 RNA5SP97-201ENST00000365006 84 ntBASIC3.77□□□□□ -1.81
PCDHGA3Q9Y5H0 SNORD116-11-201ENST00000383882 92 ntBASIC3.77□□□□□ -1.81
PCDHGA3Q9Y5H0 Y_RNA.384-201ENST00000383909 102 ntBASIC3.77□□□□□ -1.81
PCDHGA3Q9Y5H0 U1.1-201ENST00000384101 164 ntBASIC3.77□□□□□ -1.81
PCDHGA3Q9Y5H0 Y_RNA.529-201ENST00000384586 119 ntBASIC3.77□□□□□ -1.81
PCDHGA3Q9Y5H0 RNU6-328P-201ENST00000390887 106 ntBASIC3.77□□□□□ -1.81
PCDHGA3Q9Y5H0 AL356057.2-201ENST00000403318 432 ntBASIC3.77□□□□□ -1.81
PCDHGA3Q9Y5H0 RPL5P18-201ENST00000406671 891 ntBASIC3.77□□□□□ -1.81
PCDHGA3Q9Y5H0 SNORA11.1-201ENST00000408133 129 ntBASIC3.77□□□□□ -1.81
PCDHGA3Q9Y5H0 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.77□□□□□ -1.81
PCDHGA3Q9Y5H0 UBE2V1P4-201ENST00000425374 344 ntBASIC3.77□□□□□ -1.81
PCDHGA3Q9Y5H0 YME1L1P1-201ENST00000429435 297 ntBASIC3.77□□□□□ -1.81
PCDHGA3Q9Y5H0 HMGN2P20-201ENST00000437531 273 ntBASIC3.77□□□□□ -1.81
PCDHGA3Q9Y5H0 AC107399.1-201ENST00000451226 265 ntBASIC3.77□□□□□ -1.81
PCDHGA3Q9Y5H0 RN7SL93P-201ENST00000463035 293 ntBASIC3.77□□□□□ -1.81
PCDHGA3Q9Y5H0 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC3.77□□□□□ -1.81
PCDHGA3Q9Y5H0 RNU6-1231P-201ENST00000517185 103 ntBASIC3.77□□□□□ -1.81
PCDHGA3Q9Y5H0 RNA5SP179-201ENST00000517284 121 ntBASIC3.77□□□□□ -1.81
PCDHGA3Q9Y5H0 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.77□□□□□ -1.81
PCDHGA3Q9Y5H0 LINC00933-203ENST00000559812 219 ntBASIC3.77□□□□□ -1.81
PCDHGA3Q9Y5H0 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.77□□□□□ -1.81
PCDHGA3Q9Y5H0 MIR3186-201ENST00000577404 85 ntBASIC3.77□□□□□ -1.81
PCDHGA3Q9Y5H0 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC3.77□□□□□ -1.81
PCDHGA3Q9Y5H0 MIR3942-201ENST00000585264 109 ntBASIC3.77□□□□□ -1.81
PCDHGA3Q9Y5H0 OR1M4P-201ENST00000589199 287 ntBASIC3.77□□□□□ -1.81
PCDHGA3Q9Y5H0 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC3.77□□□□□ -1.81
PCDHGA3Q9Y5H0 NUTF2P8-201ENST00000604593 363 ntBASIC3.77□□□□□ -1.81
PCDHGA3Q9Y5H0 HSPE1P7-201ENST00000604681 321 ntBASIC3.77□□□□□ -1.81
PCDHGA3Q9Y5H0 AC012468.1-201ENST00000604888 430 ntBASIC3.77□□□□□ -1.81
PCDHGA3Q9Y5H0 AL132765.2-201ENST00000610812 351 ntBASIC3.77□□□□□ -1.81
PCDHGA3Q9Y5H0 AL138726.1-201ENST00000614873 333 ntBASIC3.77□□□□□ -1.81
PCDHGA3Q9Y5H0 AC092628.2-201ENST00000622492 339 ntBASIC3.77□□□□□ -1.81
PCDHGA3Q9Y5H0 AL773545.4-201ENST00000637262 310 ntBASIC3.77□□□□□ -1.81
PCDHGA3Q9Y5H0 AL513478.4-201ENST00000641636 310 ntBASIC3.77□□□□□ -1.81
PCDHGA3Q9Y5H0 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
PCDHGA3Q9Y5H0 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
PCDHGA3Q9Y5H0 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
PCDHGA3Q9Y5H0 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.77□□□□□ -1.81
PCDHGA3Q9Y5H0 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.76□□□□□ -1.81
PCDHGA3Q9Y5H0 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.76□□□□□ -1.81
PCDHGA3Q9Y5H0 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.76□□□□□ -1.81
PCDHGA3Q9Y5H0 RNU6-562P-201ENST00000362731 107 ntBASIC3.76□□□□□ -1.81
PCDHGA3Q9Y5H0 RNU6-1252P-201ENST00000363054 104 ntBASIC3.76□□□□□ -1.81
PCDHGA3Q9Y5H0 RNU6-884P-201ENST00000363889 107 ntBASIC3.76□□□□□ -1.81
PCDHGA3Q9Y5H0 RNU6-1303P-201ENST00000364841 107 ntBASIC3.76□□□□□ -1.81
PCDHGA3Q9Y5H0 SNORA75B-201ENST00000384053 137 ntBASIC3.76□□□□□ -1.81
PCDHGA3Q9Y5H0 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
PCDHGA3Q9Y5H0 AL096701.2-201ENST00000416920 238 ntBASIC3.76□□□□□ -1.81
PCDHGA3Q9Y5H0 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.76□□□□□ -1.81
PCDHGA3Q9Y5H0 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.76□□□□□ -1.81
PCDHGA3Q9Y5H0 AL353729.1-201ENST00000425044 720 ntBASIC3.76□□□□□ -1.81
PCDHGA3Q9Y5H0 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
PCDHGA3Q9Y5H0 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.76□□□□□ -1.81
PCDHGA3Q9Y5H0 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
PCDHGA3Q9Y5H0 AC117503.1-201ENST00000472241 394 ntBASIC3.76□□□□□ -1.81
PCDHGA3Q9Y5H0 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC3.76□□□□□ -1.81
PCDHGA3Q9Y5H0 AC113155.1-201ENST00000511141 769 ntBASIC3.76□□□□□ -1.81
PCDHGA3Q9Y5H0 RNU1-86P-201ENST00000516108 154 ntBASIC3.76□□□□□ -1.81
PCDHGA3Q9Y5H0 RNU1-95P-201ENST00000516357 160 ntBASIC3.76□□□□□ -1.81
PCDHGA3Q9Y5H0 RNU1-107P-201ENST00000516617 154 ntBASIC3.76□□□□□ -1.81
PCDHGA3Q9Y5H0 RNU1-128P-201ENST00000516704 160 ntBASIC3.76□□□□□ -1.81
PCDHGA3Q9Y5H0 RNU6-928P-201ENST00000516876 104 ntBASIC3.76□□□□□ -1.81
PCDHGA3Q9Y5H0 RNA5SP454-201ENST00000517231 127 ntBASIC3.76□□□□□ -1.81
PCDHGA3Q9Y5H0 IGKV2-23-201ENST00000518729 323 ntBASIC3.76□□□□□ -1.81
PCDHGA3Q9Y5H0 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.76□□□□□ -1.81
PCDHGA3Q9Y5H0 AC026371.1-201ENST00000551867 419 ntBASIC3.76□□□□□ -1.81
PCDHGA3Q9Y5H0 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.76□□□□□ -1.81
PCDHGA3Q9Y5H0 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.76□□□□□ -1.81
PCDHGA3Q9Y5H0 AC091167.4-201ENST00000605079 184 ntBASIC3.76□□□□□ -1.81
PCDHGA3Q9Y5H0 AC069200.1-201ENST00000609511 323 ntBASIC3.76□□□□□ -1.81
PCDHGA3Q9Y5H0 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.76□□□□□ -1.81
PCDHGA3Q9Y5H0 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.76□□□□□ -1.81
PCDHGA3Q9Y5H0 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.76□□□□□ -1.81
PCDHGA3Q9Y5H0 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
PCDHGA3Q9Y5H0 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
PCDHGA3Q9Y5H0 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.75□□□□□ -1.81
PCDHGA3Q9Y5H0 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.75□□□□□ -1.81
PCDHGA3Q9Y5H0 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.75□□□□□ -1.81
PCDHGA3Q9Y5H0 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
PCDHGA3Q9Y5H0 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.75□□□□□ -1.81
PCDHGA3Q9Y5H0 RNU1-18P-201ENST00000363062 164 ntBASIC3.75□□□□□ -1.81
PCDHGA3Q9Y5H0 RNU4-73P-201ENST00000363164 141 ntBASIC3.75□□□□□ -1.81
PCDHGA3Q9Y5H0 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.75□□□□□ -1.81
PCDHGA3Q9Y5H0 U8.11-201ENST00000384699 133 ntBASIC3.75□□□□□ -1.81
PCDHGA3Q9Y5H0 U8.12-201ENST00000384701 133 ntBASIC3.75□□□□□ -1.81
PCDHGA3Q9Y5H0 MIR10A-201ENST00000385043 110 ntBASIC3.75□□□□□ -1.81
PCDHGA3Q9Y5H0 HMGN2P8-201ENST00000391458 268 ntBASIC3.75□□□□□ -1.81
PCDHGA3Q9Y5H0 AL592148.1-201ENST00000413568 445 ntBASIC3.75□□□□□ -1.81
PCDHGA3Q9Y5H0 AC099548.1-201ENST00000421443 426 ntBASIC3.75□□□□□ -1.81
PCDHGA3Q9Y5H0 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC3.75□□□□□ -1.81
PCDHGA3Q9Y5H0 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.75□□□□□ -1.81
PCDHGA3Q9Y5H0 RPL32P28-201ENST00000443577 397 ntBASIC3.75□□□□□ -1.81
PCDHGA3Q9Y5H0 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC3.75□□□□□ -1.81
PCDHGA3Q9Y5H0 PRSS3P4-201ENST00000453323 162 ntBASIC3.75□□□□□ -1.81
PCDHGA3Q9Y5H0 RPL26P9-201ENST00000457466 433 ntBASIC3.75□□□□□ -1.81
PCDHGA3Q9Y5H0 U8.18-201ENST00000459285 133 ntBASIC3.75□□□□□ -1.81
PCDHGA3Q9Y5H0 RPL21P11-201ENST00000461458 483 ntBASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms