Protein–RNA interactions for Protein: Q9UMD9

COL17A1, Collagen alpha-1(XVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1Q9UMD9 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
COL17A1Q9UMD9 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC5.3□□□□□ -1.56
COL17A1Q9UMD9 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
COL17A1Q9UMD9 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
COL17A1Q9UMD9 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC5.29□□□□□ -1.56
COL17A1Q9UMD9 Y_RNA.26-201ENST00000362539 101 ntBASIC5.29□□□□□ -1.56
COL17A1Q9UMD9 Y_RNA.122-201ENST00000363331 96 ntBASIC5.29□□□□□ -1.56
COL17A1Q9UMD9 Y_RNA.234-201ENST00000364409 97 ntBASIC5.29□□□□□ -1.56
COL17A1Q9UMD9 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC5.29□□□□□ -1.56
COL17A1Q9UMD9 Y_RNA.424-201ENST00000384063 103 ntBASIC5.29□□□□□ -1.56
COL17A1Q9UMD9 Y_RNA.539-201ENST00000384635 107 ntBASIC5.29□□□□□ -1.56
COL17A1Q9UMD9 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC5.29□□□□□ -1.56
COL17A1Q9UMD9 HMGN1P24-201ENST00000412282 298 ntBASIC5.29□□□□□ -1.56
COL17A1Q9UMD9 RAC1P3-201ENST00000416129 580 ntBASIC5.29□□□□□ -1.56
COL17A1Q9UMD9 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
COL17A1Q9UMD9 RPL23AP69-201ENST00000431134 458 ntBASIC5.29□□□□□ -1.56
COL17A1Q9UMD9 AL139109.1-201ENST00000455491 297 ntBASIC5.29□□□□□ -1.56
COL17A1Q9UMD9 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
COL17A1Q9UMD9 KPNA2P1-201ENST00000458289 1591 ntBASIC5.29□□□□□ -1.56
COL17A1Q9UMD9 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC5.29□□□□□ -1.56
COL17A1Q9UMD9 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC5.29□□□□□ -1.56
COL17A1Q9UMD9 RNU6-347P-201ENST00000516658 105 ntBASIC5.29□□□□□ -1.56
COL17A1Q9UMD9 NF1P5-201ENST00000588287 448 ntBASIC5.29□□□□□ -1.56
COL17A1Q9UMD9 GLUD1P4-201ENST00000590914 418 ntBASIC5.29□□□□□ -1.56
COL17A1Q9UMD9 AL022099.1-201ENST00000604551 712 ntBASIC5.29□□□□□ -1.56
COL17A1Q9UMD9 AL391813.2-201ENST00000609113 322 ntBASIC5.29□□□□□ -1.56
COL17A1Q9UMD9 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
COL17A1Q9UMD9 AL596245.1-201ENST00000618994 362 ntBASIC5.29□□□□□ -1.56
COL17A1Q9UMD9 AC074140.1-201ENST00000621617 208 ntBASIC5.29□□□□□ -1.56
COL17A1Q9UMD9 AL159972.1-201ENST00000625150 448 ntBASIC5.29□□□□□ -1.56
COL17A1Q9UMD9 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC5.29□□□□□ -1.56
COL17A1Q9UMD9 AC009902.3-201ENST00000606235 2172 ntBASIC5.29□□□□□ -1.56
COL17A1Q9UMD9 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.28□□□□□ -1.56
COL17A1Q9UMD9 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.28□□□□□ -1.56
COL17A1Q9UMD9 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
COL17A1Q9UMD9 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC5.28□□□□□ -1.56
COL17A1Q9UMD9 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
COL17A1Q9UMD9 AC010329.2-201ENST00000595195 2737 ntBASIC5.28□□□□□ -1.56
COL17A1Q9UMD9 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
COL17A1Q9UMD9 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC5.28□□□□□ -1.56
COL17A1Q9UMD9 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.28□□□□□ -1.56
COL17A1Q9UMD9 Y_RNA.20-201ENST00000362479 113 ntBASIC5.28□□□□□ -1.56
COL17A1Q9UMD9 RNA5SP293-201ENST00000410527 113 ntBASIC5.28□□□□□ -1.56
COL17A1Q9UMD9 ARL5AP1-201ENST00000418991 388 ntBASIC5.28□□□□□ -1.56
COL17A1Q9UMD9 AL139396.1-201ENST00000421137 167 ntBASIC5.28□□□□□ -1.56
COL17A1Q9UMD9 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
COL17A1Q9UMD9 TRAPPC2P5-201ENST00000426293 308 ntBASIC5.28□□□□□ -1.56
COL17A1Q9UMD9 RPL7L1P10-201ENST00000427790 463 ntBASIC5.28□□□□□ -1.56
COL17A1Q9UMD9 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC5.28□□□□□ -1.56
COL17A1Q9UMD9 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC5.28□□□□□ -1.56
COL17A1Q9UMD9 AC010469.1-201ENST00000463864 576 ntBASIC5.28□□□□□ -1.56
COL17A1Q9UMD9 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC5.28□□□□□ -1.56
COL17A1Q9UMD9 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC5.28□□□□□ -1.56
COL17A1Q9UMD9 SNORA72.7-201ENST00000516349 94 ntBASIC5.28□□□□□ -1.56
COL17A1Q9UMD9 SNORD116.3-201ENST00000517176 78 ntBASIC5.28□□□□□ -1.56
COL17A1Q9UMD9 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC5.28□□□□□ -1.56
COL17A1Q9UMD9 AC004024.1-201ENST00000549244 247 ntBASIC5.28□□□□□ -1.56
COL17A1Q9UMD9 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC5.28□□□□□ -1.56
COL17A1Q9UMD9 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC5.28□□□□□ -1.56
COL17A1Q9UMD9 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC5.28□□□□□ -1.56
COL17A1Q9UMD9 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC5.28□□□□□ -1.56
COL17A1Q9UMD9 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
COL17A1Q9UMD9 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
COL17A1Q9UMD9 Z83843.1-201ENST00000604070 3685 ntBASIC5.28□□□□□ -1.56
COL17A1Q9UMD9 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC5.28□□□□□ -1.56
COL17A1Q9UMD9 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.28□□□□□ -1.56
COL17A1Q9UMD9 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
COL17A1Q9UMD9 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
COL17A1Q9UMD9 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC5.27□□□□□ -1.57
COL17A1Q9UMD9 U3.12-201ENST00000364498 214 ntBASIC5.27□□□□□ -1.57
COL17A1Q9UMD9 RNA5-8SP4-201ENST00000365096 150 ntBASIC5.27□□□□□ -1.57
COL17A1Q9UMD9 RNU6-1226P-201ENST00000384317 107 ntBASIC5.27□□□□□ -1.57
COL17A1Q9UMD9 TIMM9P1-201ENST00000436122 256 ntBASIC5.27□□□□□ -1.57
COL17A1Q9UMD9 AC006028.1-201ENST00000438379 402 ntBASIC5.27□□□□□ -1.57
COL17A1Q9UMD9 AC073587.1-201ENST00000447093 876 ntBASIC5.27□□□□□ -1.57
COL17A1Q9UMD9 AC104073.1-201ENST00000451988 151 ntBASIC5.27□□□□□ -1.57
COL17A1Q9UMD9 AL138752.1-201ENST00000452964 351 ntBASIC5.27□□□□□ -1.57
COL17A1Q9UMD9 RNU6-470P-201ENST00000515954 104 ntBASIC5.27□□□□□ -1.57
COL17A1Q9UMD9 RNU4ATAC6P-201ENST00000516592 126 ntBASIC5.27□□□□□ -1.57
COL17A1Q9UMD9 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
COL17A1Q9UMD9 AC005476.1-201ENST00000554427 397 ntBASIC5.27□□□□□ -1.57
COL17A1Q9UMD9 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC5.27□□□□□ -1.57
COL17A1Q9UMD9 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC5.27□□□□□ -1.57
COL17A1Q9UMD9 SNORD58B-201ENST00000607313 66 ntBASIC5.27□□□□□ -1.57
COL17A1Q9UMD9 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC5.27□□□□□ -1.57
COL17A1Q9UMD9 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
COL17A1Q9UMD9 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC5.27□□□□□ -1.57
COL17A1Q9UMD9 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC5.27□□□□□ -1.57
COL17A1Q9UMD9 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
COL17A1Q9UMD9 Y_RNA.64-201ENST00000362845 102 ntBASIC5.26□□□□□ -1.57
COL17A1Q9UMD9 RNU5A-8P-201ENST00000364102 114 ntBASIC5.26□□□□□ -1.57
COL17A1Q9UMD9 RNU1-115P-201ENST00000365329 160 ntBASIC5.26□□□□□ -1.57
COL17A1Q9UMD9 Y_RNA.428-201ENST00000384078 102 ntBASIC5.26□□□□□ -1.57
COL17A1Q9UMD9 AL138885.1-201ENST00000405921 675 ntBASIC5.26□□□□□ -1.57
COL17A1Q9UMD9 RNU4-47P-201ENST00000410876 114 ntBASIC5.26□□□□□ -1.57
COL17A1Q9UMD9 OR6C66P-201ENST00000414917 930 ntBASIC5.26□□□□□ -1.57
COL17A1Q9UMD9 FTH1P1-201ENST00000437933 532 ntBASIC5.26□□□□□ -1.57
COL17A1Q9UMD9 AC126389.1-201ENST00000477436 290 ntBASIC5.26□□□□□ -1.57
COL17A1Q9UMD9 RPL7P43-201ENST00000478876 753 ntBASIC5.26□□□□□ -1.57
COL17A1Q9UMD9 RNU4ATAC8P-201ENST00000516196 109 ntBASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms